RNA–Protein interactions for RNA: ENST00000497692.1

CCNY-210, Transcript of cyclin Y, humanhuman

TSL 2

Gene CCNY, Length 478 nt, Biotype processed transcript, Subcellular localisation Cytoplasm, Cytosol, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CCNY-210ENST00000497692 NISCHQ9Y2I1 1504 aa27.47■■□□□ 1.99
CCNY-210ENST00000497692 CCDC180Q9P1Z9 1646 aa24.32■■□□□ 1.48
CCNY-210ENST00000497692 ABCC9O60706 1549 aa23.64■■□□□ 1.38
CCNY-210ENST00000497692 DCAF8L2P0C7V8 631 aa22.98■■□□□ 1.27
CCNY-210ENST00000497692 ZCCHC6Q5VYS8 1495 aaKnown RBP22.91■■□□□ 1.26
CCNY-210ENST00000497692 NACADO15069 1562 aa22.8■■□□□ 1.24
CCNY-210ENST00000497692 RB1CC1Q8TDY2 1594 aa22.79■■□□□ 1.24
CCNY-210ENST00000497692 MYO15BQ96JP2 1530 aa22.68■■□□□ 1.22
CCNY-210ENST00000497692 DCAF1Q9Y4B6 1507 aa22.68■■□□□ 1.22
CCNY-210ENST00000497692 UNC13AQ9UPW8 1703 aa22.37■■□□□ 1.17
CCNY-210ENST00000497692 SCRIBQ14160 1630 aa22.26■■□□□ 1.15
CCNY-210ENST00000497692 PABPN1Q86U42 306 aaKnown RBP eCLIP22.15■■□□□ 1.14
CCNY-210ENST00000497692 BICRAQ9NZM4 1560 aa22.11■■□□□ 1.13
CCNY-210ENST00000497692 SHROOM4Q9ULL8 1493 aa21.94■■□□□ 1.1
CCNY-210ENST00000497692 DNAJC5BQ9UF47 199 aa21.51■■□□□ 1.03
CCNY-210ENST00000497692 EIF4G1Q04637 1599 aaKnown RBP21.49■■□□□ 1.03
CCNY-210ENST00000497692 CECR2Q9BXF3 1484 aa21.42■■□□□ 1.02
CCNY-210ENST00000497692 CC2D2AQ9P2K1 1620 aa21.38■■□□□ 1.01
CCNY-210ENST00000497692 SMARCA4P51532 1647 aa21.29■■□□□ 1
CCNY-210ENST00000497692 BAZ1AQ9NRL2 1556 aaPredicted RBP21.27■□□□□ 0.99
CCNY-210ENST00000497692 MROH2BQ7Z745 1585 aa21.21■□□□□ 0.99
CCNY-210ENST00000497692 ATAD2BQ9ULI0 1458 aa21.1■□□□□ 0.97
CCNY-210ENST00000497692 SMARCA2P51531 1590 aa21.06■□□□□ 0.96
CCNY-210ENST00000497692 NCAPD3P42695 1498 aa21.03■□□□□ 0.96
CCNY-210ENST00000497692 WIZO95785 1651 aa21.02■□□□□ 0.96
CCNY-210ENST00000497692 PEG3Q9GZU2 1588 aa21.02■□□□□ 0.96
CCNY-210ENST00000497692 RSF1Q96T23 1441 aaPredicted RBP21.02■□□□□ 0.96
CCNY-210ENST00000497692 BAZ1BQ9UIG0 1483 aaKnown RBP20.94■□□□□ 0.94
CCNY-210ENST00000497692 HMGXB3Q12766 1538 aa20.94■□□□□ 0.94
CCNY-210ENST00000497692 SUPT5HO00267 1087 aaKnown RBP20.75■□□□□ 0.91
CCNY-210ENST00000497692 TOP2AP11388 1531 aaKnown RBP20.74■□□□□ 0.91
CCNY-210ENST00000497692 CCDC88BA6NC98 1476 aa20.54■□□□□ 0.88
CCNY-210ENST00000497692 NESP48681 1621 aa20.53■□□□□ 0.88
CCNY-210ENST00000497692 LAMC3Q9Y6N6 1575 aa20.45■□□□□ 0.86
CCNY-210ENST00000497692 CADPSQ9ULU8 1353 aa20.45■□□□□ 0.86
CCNY-210ENST00000497692 CFTRP13569 1480 aa20.36■□□□□ 0.85
CCNY-210ENST00000497692 ERCC6Q03468 1493 aa20.33■□□□□ 0.85
CCNY-210ENST00000497692 PDS5BQ9NTI5 1447 aa20.3■□□□□ 0.84
CCNY-210ENST00000497692 KIF21AQ7Z4S6 1674 aa20.3■□□□□ 0.84
CCNY-210ENST00000497692 PRDM2Q13029 1718 aa20.29■□□□□ 0.84
CCNY-210ENST00000497692 FANCD2Q9BXW9 1451 aa20.23■□□□□ 0.83
CCNY-210ENST00000497692 CEP164Q9UPV0 1460 aa20.17■□□□□ 0.82
CCNY-210ENST00000497692 THOC2Q8NI27 1593 aaKnown RBP20.12■□□□□ 0.81
CCNY-210ENST00000497692 MRC2Q9UBG0 1479 aa20.09■□□□□ 0.81
CCNY-210ENST00000497692 URB2Q14146 1524 aaKnown RBP20.02■□□□□ 0.79
CCNY-210ENST00000497692 WDR62O43379 1518 aa20.01■□□□□ 0.79
CCNY-210ENST00000497692 CUX2O14529 1486 aa19.99■□□□□ 0.79
CCNY-210ENST00000497692 TOPBP1Q92547 1522 aa19.94■□□□□ 0.78
CCNY-210ENST00000497692 DNMBPQ6XZF7 1577 aa19.91■□□□□ 0.78
CCNY-210ENST00000497692 ABCC8Q09428 1581 aa19.91■□□□□ 0.78
CCNY-210ENST00000497692 CUX1P39880 1505 aa19.87■□□□□ 0.77
CCNY-210ENST00000497692 WRNQ14191 1432 aaPredicted RBP eCLIP19.82■□□□□ 0.76
CCNY-210ENST00000497692 SYNJ1O43426 1573 aa19.78■□□□□ 0.76
CCNY-210ENST00000497692 POLA1P09884 1462 aaPredicted RBP19.77■□□□□ 0.76
CCNY-210ENST00000497692 FGD5Q6ZNL6 1462 aa19.77■□□□□ 0.76
CCNY-210ENST00000497692 BIVM-ERCC5R4GMW8 1640 aa19.76■□□□□ 0.75
CCNY-210ENST00000497692 TOP2BQ02880 1626 aa19.75■□□□□ 0.75
CCNY-210ENST00000497692 IFT140Q96RY7 1462 aa19.73■□□□□ 0.75
CCNY-210ENST00000497692 RAD54L2Q9Y4B4 1467 aa19.73■□□□□ 0.75
CCNY-210ENST00000497692 SOGA1O94964 1423 aa19.71■□□□□ 0.75
CCNY-210ENST00000497692 TARBP1Q13395 1621 aaKnown RBP19.69■□□□□ 0.74
CCNY-210ENST00000497692 ZNF608Q9ULD9 1512 aaPredicted RBP19.66■□□□□ 0.74
CCNY-210ENST00000497692 WDR97A6NE52 1622 aa19.6■□□□□ 0.73
CCNY-210ENST00000497692 TDRD9Q8NDG6 1382 aaKnown RBP19.59■□□□□ 0.73
CCNY-210ENST00000497692 AQRO60306 1485 aaKnown RBP eCLIP19.59■□□□□ 0.737e-7■■■■■ 29.3
CCNY-210ENST00000497692 EIF4G3O43432 1585 aaKnown RBP19.57■□□□□ 0.72
CCNY-210ENST00000497692 ABCA10Q8WWZ4 1543 aa19.56■□□□□ 0.72
CCNY-210ENST00000497692 TRIM41Q8WV44 630 aa19.55■□□□□ 0.72
CCNY-210ENST00000497692 ABCA5Q8WWZ7 1642 aa19.48■□□□□ 0.71
CCNY-210ENST00000497692 GAPVD1Q14C86 1478 aa19.48■□□□□ 0.71
CCNY-210ENST00000497692 CHIC1Q5VXU3 224 aa19.47■□□□□ 0.71
CCNY-210ENST00000497692 PBRM1Q86U86 1689 aa19.46■□□□□ 0.71
CCNY-210ENST00000497692 GRIN2BQ13224 1484 aa19.42■□□□□ 0.7
CCNY-210ENST00000497692 SNAPC4Q5SXM2 1469 aa19.39■□□□□ 0.69
CCNY-210ENST00000497692 KIF27Q86VH2 1401 aa19.37■□□□□ 0.69
CCNY-210ENST00000497692 CHD1O14646 1710 aa19.34■□□□□ 0.69
CCNY-210ENST00000497692 FBLN2P98095 1184 aa19.34■□□□□ 0.69
CCNY-210ENST00000497692 RUSC2Q8N2Y8 1516 aa19.34■□□□□ 0.69
CCNY-210ENST00000497692 MAGI1Q96QZ7 1491 aaPredicted RBP19.34■□□□□ 0.69
CCNY-210ENST00000497692 ERICH3Q5RHP9 1530 aa19.32■□□□□ 0.68
CCNY-210ENST00000497692 CHMP7Q8WUX9 453 aaPredicted RBP19.29■□□□□ 0.68
CCNY-210ENST00000497692 IGF1RP08069 1367 aa19.29■□□□□ 0.68
CCNY-210ENST00000497692 ADAMTS12P58397 1594 aa19.27■□□□□ 0.68
CCNY-210ENST00000497692 SYNJ2O15056 1496 aa19.27■□□□□ 0.67
CCNY-210ENST00000497692 OSCARQ8IYS5 282 aa19.26■□□□□ 0.67
CCNY-210ENST00000497692 FHAD1B1AJZ9 1412 aa19.24■□□□□ 0.67
CCNY-210ENST00000497692 CUL7Q14999 1698 aa19.21■□□□□ 0.67
CCNY-210ENST00000497692 FAM9AQ8IZU1 332 aaPredicted RBP19.2■□□□□ 0.66
CCNY-210ENST00000497692 CARMIL1Q5VZK9 1371 aa19.19■□□□□ 0.66
CCNY-210ENST00000497692 GRIN2AQ12879 1464 aa19.18■□□□□ 0.66
CCNY-210ENST00000497692 DNAJC5Q9H3Z4 198 aa19.16■□□□□ 0.66
CCNY-210ENST00000497692 CSRNP3Q8WYN3 585 aa19.14■□□□□ 0.65
CCNY-210ENST00000497692 EEA1Q15075 1411 aa19.13■□□□□ 0.65
CCNY-210ENST00000497692 CEP170Q5SW79 1584 aa19.1■□□□□ 0.65
CCNY-210ENST00000497692 RAPGEF2Q9Y4G8 1499 aa19.09■□□□□ 0.65
CCNY-210ENST00000497692 NUP160Q12769 1436 aa19.08■□□□□ 0.64
CCNY-210ENST00000497692 CLASP1Q7Z460 1538 aa19.06■□□□□ 0.64
CCNY-210ENST00000497692 PRXQ9BXM0 1461 aa19.05■□□□□ 0.64
CCNY-210ENST00000497692 EHMT2Q96KQ7 1210 aa18.98■□□□□ 0.63
CCNY-210ENST00000497692 KIAA0586Q9BVV6 1533 aa18.95■□□□□ 0.62
Retrieved 100 of 20,778 RNA–protein pairs in 8.8 ms