RNA–Protein interactions for RNA: ENST00000355231.9

HMBOX1-202, Transcript of homeobox containing 1, humanhuman

TSL 5 BASIC

Gene HMBOX1, Length 1,694 nt, Biotype protein coding, Subcellular localisation Cytoplasm, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
HMBOX1-202ENST00000355231 AEBP2Q6ZN18 517 aaPredicted RBP12.15□□□□□ -0.46
HMBOX1-202ENST00000355231 CHIC1Q5VXU3 224 aa11.71□□□□□ -0.53
HMBOX1-202ENST00000355231 POTEDQ86YR6 584 aa10.8□□□□□ -0.68
HMBOX1-202ENST00000355231 PHF23Q9BUL5 403 aaPredicted RBP10.4□□□□□ -0.74
HMBOX1-202ENST00000355231 NISCHQ9Y2I1 1504 aa10.16□□□□□ -0.78
HMBOX1-202ENST00000355231 SENP3Q9H4L4 574 aaPredicted RBP10.13□□□□□ -0.79
HMBOX1-202ENST00000355231 FOXD1Q16676 465 aa9.52□□□□□ -0.89
HMBOX1-202ENST00000355231 PLPPR3Q6T4P5 718 aa9.42□□□□□ -0.9
HMBOX1-202ENST00000355231 MSH5O43196 834 aa9.29□□□□□ -0.92
HMBOX1-202ENST00000355231 PPP6R1Q9UPN7 881 aa9.2□□□□□ -0.94
HMBOX1-202ENST00000355231 ADRA2BP18089 450 aa9.13□□□□□ -0.95
HMBOX1-202ENST00000355231 ABCC9O60706 1549 aa9.11□□□□□ -0.95
HMBOX1-202ENST00000355231 CCDC180Q9P1Z9 1646 aa8.97□□□□□ -0.97
HMBOX1-202ENST00000355231 PIAS4Q8N2W9 510 aaPredicted RBP8.89□□□□□ -0.99
HMBOX1-202ENST00000355231 MYT1Q01538 1121 aa8.83□□□□□ -1
HMBOX1-202ENST00000355231 PELP1Q8IZL8 1130 aaKnown RBP8.83□□□□□ -1
HMBOX1-202ENST00000355231 DNAJC5BQ9UF47 199 aa8.68□□□□□ -1.02
HMBOX1-202ENST00000355231 DCAF8L2P0C7V8 631 aa8.66□□□□□ -1.02
HMBOX1-202ENST00000355231 RB1CC1Q8TDY2 1594 aa8.58□□□□□ -1.04
HMBOX1-202ENST00000355231 PABPN1Q86U42 306 aaKnown RBP eCLIP8.57□□□□□ -1.04
HMBOX1-202ENST00000355231 DNAJC5Q9H3Z4 198 aa8.57□□□□□ -1.04
HMBOX1-202ENST00000355231 NACADO15069 1562 aa8.55□□□□□ -1.04
HMBOX1-202ENST00000355231 CACNB1Q02641 598 aaPredicted RBP8.54□□□□□ -1.04
HMBOX1-202ENST00000355231 TTBK1Q5TCY1 1321 aaPredicted RBP8.53□□□□□ -1.04
HMBOX1-202ENST00000355231 MYO15BQ96JP2 1530 aa8.45□□□□□ -1.06
HMBOX1-202ENST00000355231 BICRAQ9NZM4 1560 aa8.41□□□□□ -1.06
HMBOX1-202ENST00000355231 ZCCHC6Q5VYS8 1495 aaKnown RBP8.41□□□□□ -1.06
HMBOX1-202ENST00000355231 UNC13AQ9UPW8 1703 aa8.35□□□□□ -1.07
HMBOX1-202ENST00000355231 PPP4R3CPQ6ZMV5 832 aa8.35□□□□□ -1.07
HMBOX1-202ENST00000355231 DCAF1Q9Y4B6 1507 aa8.35□□□□□ -1.07
HMBOX1-202ENST00000355231 MAPK8IP2Q13387 824 aaPredicted RBP8.33□□□□□ -1.08
HMBOX1-202ENST00000355231 SCRIBQ14160 1630 aa8.27□□□□□ -1.09
HMBOX1-202ENST00000355231 POTEHQ6S545 545 aa8.26□□□□□ -1.09
HMBOX1-202ENST00000355231 SHROOM4Q9ULL8 1493 aa8.19□□□□□ -1.1
HMBOX1-202ENST00000355231 CECR2Q9BXF3 1484 aa8.19□□□□□ -1.1
HMBOX1-202ENST00000355231 CC2D2AQ9P2K1 1620 aa8.18□□□□□ -1.1
HMBOX1-202ENST00000355231 KCNA4P22459 653 aa8.18□□□□□ -1.1
HMBOX1-202ENST00000355231 EIF4G1Q04637 1599 aaKnown RBP8.16□□□□□ -1.1
HMBOX1-202ENST00000355231 SCAF1Q9H7N4 1312 aaKnown RBP8.16□□□□□ -1.1
HMBOX1-202ENST00000355231 DMRT2Q9Y5R5 561 aa8.14□□□□□ -1.11
HMBOX1-202ENST00000355231 CNKSR2Q8WXI2 1034 aa8.08□□□□□ -1.12
HMBOX1-202ENST00000355231 ERICH6Q7L0X2 663 aa8.05□□□□□ -1.12
HMBOX1-202ENST00000355231 NPM3O75607 178 aaKnown RBP8.04□□□□□ -1.12
HMBOX1-202ENST00000355231 NCBP3Q53F19 620 aaKnown RBP7.99□□□□□ -1.13
HMBOX1-202ENST00000355231 HOXD11P31277 338 aaPredicted RBP7.97□□□□□ -1.13
HMBOX1-202ENST00000355231 NCAPD3P42695 1498 aa7.96□□□□□ -1.13
HMBOX1-202ENST00000355231 ATAD2BQ9ULI0 1458 aa7.95□□□□□ -1.14
HMBOX1-202ENST00000355231 RNF216Q9NWF9 866 aaPredicted RBP7.95□□□□□ -1.14
HMBOX1-202ENST00000355231 SLC24A1O60721 1099 aa7.92□□□□□ -1.14
HMBOX1-202ENST00000355231 SMARCA4P51532 1647 aa7.87□□□□□ -1.15
HMBOX1-202ENST00000355231 MROH2BQ7Z745 1585 aa7.86□□□□□ -1.15
HMBOX1-202ENST00000355231 NESP48681 1621 aa7.85□□□□□ -1.15
HMBOX1-202ENST00000355231 APLP2Q06481 763 aa7.84□□□□□ -1.15
HMBOX1-202ENST00000355231 SMARCA2P51531 1590 aa7.84□□□□□ -1.15
HMBOX1-202ENST00000355231 HRCP23327 699 aa7.83□□□□□ -1.16
HMBOX1-202ENST00000355231 BAZ1AQ9NRL2 1556 aaPredicted RBP7.83□□□□□ -1.16
HMBOX1-202ENST00000355231 HMGXB3Q12766 1538 aa7.82□□□□□ -1.16
HMBOX1-202ENST00000355231 BAZ1BQ9UIG0 1483 aaKnown RBP7.82□□□□□ -1.16
HMBOX1-202ENST00000355231 ERCC6Q03468 1493 aa7.8□□□□□ -1.16
HMBOX1-202ENST00000355231 PRKCSHP14314 528 aaPredicted RBP7.8□□□□□ -1.16
HMBOX1-202ENST00000355231 PEG3Q9GZU2 1588 aa7.79□□□□□ -1.16
HMBOX1-202ENST00000355231 CUX2O14529 1486 aa7.77□□□□□ -1.17
HMBOX1-202ENST00000355231 RNF39Q9H2S5 420 aa7.75□□□□□ -1.17
HMBOX1-202ENST00000355231 SUPT5HO00267 1087 aaKnown RBP7.74□□□□□ -1.17
HMBOX1-202ENST00000355231 RSF1Q96T23 1441 aaPredicted RBP7.74□□□□□ -1.17
HMBOX1-202ENST00000355231 CADPSQ9ULU8 1353 aa7.74□□□□□ -1.17
HMBOX1-202ENST00000355231 TRIM41Q8WV44 630 aa7.73□□□□□ -1.17
HMBOX1-202ENST00000355231 WIZO95785 1651 aa7.72□□□□□ -1.17
HMBOX1-202ENST00000355231 PDS5BQ9NTI5 1447 aa7.7□□□□□ -1.18
HMBOX1-202ENST00000355231 DCAF8L1A6NGE4 600 aa7.7□□□□□ -1.18
HMBOX1-202ENST00000355231 LAMC3Q9Y6N6 1575 aa7.69□□□□□ -1.18
HMBOX1-202ENST00000355231 SLC4A1APQ9BWU0 796 aaKnown RBP7.68□□□□□ -1.18
HMBOX1-202ENST00000355231 THOC2Q8NI27 1593 aaKnown RBP7.67□□□□□ -1.18
HMBOX1-202ENST00000355231 C1QBPQ07021 282 aaKnown RBP7.66□□□□□ -1.18
HMBOX1-202ENST00000355231 DAXXQ9UER7 740 aaPredicted RBP7.66□□□□□ -1.18
HMBOX1-202ENST00000355231 SLC4A2P04920 1241 aa7.65□□□□□ -1.18
HMBOX1-202ENST00000355231 BCL11AQ9H165 835 aa7.63□□□□□ -1.19
HMBOX1-202ENST00000355231 CFTRP13569 1480 aa7.63□□□□□ -1.19
HMBOX1-202ENST00000355231 KIF21AQ7Z4S6 1674 aa7.63□□□□□ -1.19
HMBOX1-202ENST00000355231 MRC2Q9UBG0 1479 aa7.62□□□□□ -1.19
HMBOX1-202ENST00000355231 FANCD2Q9BXW9 1451 aa7.61□□□□□ -1.19
HMBOX1-202ENST00000355231 CENPBP07199 599 aaPredicted RBP7.61□□□□□ -1.19
HMBOX1-202ENST00000355231 ILDR1Q86SU0 546 aaPredicted RBP7.61□□□□□ -1.19
HMBOX1-202ENST00000355231 TOP2AP11388 1531 aaKnown RBP7.6□□□□□ -1.19
HMBOX1-202ENST00000355231 CCDC88BA6NC98 1476 aa7.59□□□□□ -1.19
HMBOX1-202ENST00000355231 ZBTB22O15209 634 aa7.59□□□□□ -1.19
HMBOX1-202ENST00000355231 CEP164Q9UPV0 1460 aa7.59□□□□□ -1.19
HMBOX1-202ENST00000355231 WDR62O43379 1518 aa7.59□□□□□ -1.2
HMBOX1-202ENST00000355231 URB2Q14146 1524 aaKnown RBP7.57□□□□□ -1.2
HMBOX1-202ENST00000355231 OSCARQ8IYS5 282 aa7.51□□□□□ -1.21
HMBOX1-202ENST00000355231 ZNF608Q9ULD9 1512 aaPredicted RBP7.5□□□□□ -1.21
HMBOX1-202ENST00000355231 GRWD1Q9BQ67 446 aaKnown RBP eCLIP7.5□□□□□ -1.211e-10■□□□□ 10.8
HMBOX1-202ENST00000355231 U3KPZ7 1027 aaPredicted RBP7.48□□□□□ -1.21
HMBOX1-202ENST00000355231 TOPBP1Q92547 1522 aa7.47□□□□□ -1.21
HMBOX1-202ENST00000355231 CSRNP3Q8WYN3 585 aa7.46□□□□□ -1.22
HMBOX1-202ENST00000355231 EHMT2Q96KQ7 1210 aa7.45□□□□□ -1.22
HMBOX1-202ENST00000355231 AQRO60306 1485 aaKnown RBP eCLIP7.45□□□□□ -1.222e-6■■■■□ 20.6
HMBOX1-202ENST00000355231 IFT140Q96RY7 1462 aa7.45□□□□□ -1.22
HMBOX1-202ENST00000355231 FOXD4L1Q9NU39 408 aa7.44□□□□□ -1.22
HMBOX1-202ENST00000355231 ZEB1P37275 1124 aaPredicted RBP7.44□□□□□ -1.22
Retrieved 100 of 20,778 RNA–protein pairs in 36.8 ms