RNA–Protein interactions for RNA: ENST00000580336.1

LINC00470-205, long intergenic non-protein coding RNA 470, humanhuman

TSL 2

Gene LINC00470, Length 408 nt, Biotype lincRNA.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
LINC00470-205ENST00000580336 AEBP2Q6ZN18 517 aaPredicted RBP24.18■■□□□ 1.46
LINC00470-205ENST00000580336 CHIC1Q5VXU3 224 aa22.93■■□□□ 1.26
LINC00470-205ENST00000580336 SENP3Q9H4L4 574 aaPredicted RBP20.76■□□□□ 0.91
LINC00470-205ENST00000580336 PHF23Q9BUL5 403 aaPredicted RBP20.44■□□□□ 0.86
LINC00470-205ENST00000580336 FOXD1Q16676 465 aa19.29■□□□□ 0.68
LINC00470-205ENST00000580336 PLPPR3Q6T4P5 718 aa18.35■□□□□ 0.53
LINC00470-205ENST00000580336 MSH5O43196 834 aa18.17■□□□□ 0.5
LINC00470-205ENST00000580336 PIAS4Q8N2W9 510 aaPredicted RBP18.11■□□□□ 0.49
LINC00470-205ENST00000580336 ADRA2BP18089 450 aa17.93■□□□□ 0.46
LINC00470-205ENST00000580336 PPP6R1Q9UPN7 881 aa17.93■□□□□ 0.46
LINC00470-205ENST00000580336 POTEDQ86YR6 584 aa17.82■□□□□ 0.44
LINC00470-205ENST00000580336 SCAF1Q9H7N4 1312 aaKnown RBP16.51■□□□□ 0.23
LINC00470-205ENST00000580336 MAPK8IP2Q13387 824 aaPredicted RBP16.48■□□□□ 0.23
LINC00470-205ENST00000580336 DMRT2Q9Y5R5 561 aa16.4■□□□□ 0.22
LINC00470-205ENST00000580336 PPP4R3CPQ6ZMV5 832 aa16.05■□□□□ 0.16
LINC00470-205ENST00000580336 DCAF8L1A6NGE4 600 aa15.92■□□□□ 0.14
LINC00470-205ENST00000580336 CNKSR2Q8WXI2 1034 aa15.78■□□□□ 0.12
LINC00470-205ENST00000580336 HOXD11P31277 338 aaPredicted RBP15.73■□□□□ 0.11
LINC00470-205ENST00000580336 CACNB1Q02641 598 aaPredicted RBP15.69■□□□□ 0.1
LINC00470-205ENST00000580336 RNF216Q9NWF9 866 aaPredicted RBP15.64■□□□□ 0.09
LINC00470-205ENST00000580336 NCBP3Q53F19 620 aaKnown RBP15.49■□□□□ 0.07
LINC00470-205ENST00000580336 RNF39Q9H2S5 420 aa15.42■□□□□ 0.06
LINC00470-205ENST00000580336 C1QBPQ07021 282 aaKnown RBP15.24■□□□□ 0.03
LINC00470-205ENST00000580336 DNAJC5BQ9UF47 199 aa15.18■□□□□ 0.02
LINC00470-205ENST00000580336 NPM3O75607 178 aaKnown RBP15.16■□□□□ 0.02
LINC00470-205ENST00000580336 KCNA4P22459 653 aa15.14■□□□□ 0.01
LINC00470-205ENST00000580336 GRWD1Q9BQ67 446 aaKnown RBP eCLIP15.14■□□□□ 0.01
LINC00470-205ENST00000580336 U3KPZ7 1027 aaPredicted RBP14.7□□□□□ -0.06
LINC00470-205ENST00000580336 CAPN15O75808 1086 aa14.62□□□□□ -0.07
LINC00470-205ENST00000580336 SPINK5Q9NQ38 1064 aaPredicted RBP14.53□□□□□ -0.08
LINC00470-205ENST00000580336 SLC4A2P04920 1241 aa14.45□□□□□ -0.1
LINC00470-205ENST00000580336 APLP2Q06481 763 aa14.43□□□□□ -0.1
LINC00470-205ENST00000580336 DSG3P32926 999 aa14.42□□□□□ -0.1
LINC00470-205ENST00000580336 HNRNPUL2-BSCL2H3BQZ7 746 aaPredicted RBP14.36□□□□□ -0.11
LINC00470-205ENST00000580336 TRHP20396 242 aaPredicted RBP14.36□□□□□ -0.11
LINC00470-205ENST00000580336 HNRNPUL2Q1KMD3 747 aaKnown RBP14.36□□□□□ -0.11
LINC00470-205ENST00000580336 SLC4A1APQ9BWU0 796 aaKnown RBP14.3□□□□□ -0.12
LINC00470-205ENST00000580336 ZNF219Q9P2Y4 722 aaPredicted RBP14.3□□□□□ -0.12
LINC00470-205ENST00000580336 SAMD1Q6SPF0 538 aaPredicted RBP14.25□□□□□ -0.13
LINC00470-205ENST00000580336 ABCB7O75027 752 aa14.24□□□□□ -0.13
LINC00470-205ENST00000580336 MYCNP04198 464 aaPredicted RBP14.09□□□□□ -0.15
LINC00470-205ENST00000580336 ZBTB22O15209 634 aa14.03□□□□□ -0.16
LINC00470-205ENST00000580336 EHMT2Q96KQ7 1210 aa14□□□□□ -0.17
LINC00470-205ENST00000580336 POTEHQ6S545 545 aa13.99□□□□□ -0.17
LINC00470-205ENST00000580336 POLA2Q14181 598 aa13.89□□□□□ -0.19
LINC00470-205ENST00000580336 FOXD4L1Q9NU39 408 aa13.89□□□□□ -0.19
LINC00470-205ENST00000580336 RBM42Q9BTD8 480 aaKnown RBP13.87□□□□□ -0.19
LINC00470-205ENST00000580336 CSRNP3Q8WYN3 585 aa13.82□□□□□ -0.2
LINC00470-205ENST00000580336 ATF5Q9Y2D1 282 aaPredicted RBP13.67□□□□□ -0.22
LINC00470-205ENST00000580336 ZBTB12Q9Y330 459 aaPredicted RBP13.66□□□□□ -0.22
LINC00470-205ENST00000580336 CHRDL2Q6WN34 429 aa13.55□□□□□ -0.24
LINC00470-205ENST00000580336 AKT1S1Q96B36 256 aa13.48□□□□□ -0.25
LINC00470-205ENST00000580336 OSCARQ8IYS5 282 aa13.46□□□□□ -0.25
LINC00470-205ENST00000580336 ATXN8OSP0DMR3 200 aa13.43□□□□□ -0.26
LINC00470-205ENST00000580336 REM2Q8IYK8 340 aaPredicted RBP13.34□□□□□ -0.27
LINC00470-205ENST00000580336 FBLN2P98095 1184 aa13.31□□□□□ -0.28
LINC00470-205ENST00000580336 PITPNM1O00562 1244 aa13.2□□□□□ -0.3
LINC00470-205ENST00000580336 SPDYE2BA6NHP3 402 aa13.18□□□□□ -0.3
LINC00470-205ENST00000580336 SPDYE6P0CI01 402 aa13.18□□□□□ -0.3
LINC00470-205ENST00000580336 SPDYE2Q495Y8 402 aa13.18□□□□□ -0.3
LINC00470-205ENST00000580336 PIP4P2Q8N4L2 257 aa13.18□□□□□ -0.3
LINC00470-205ENST00000580336 SP7Q8TDD2 431 aaPredicted RBP13.07□□□□□ -0.32
LINC00470-205ENST00000580336 HAX1O00165 279 aa13.06□□□□□ -0.32
LINC00470-205ENST00000580336 FXR2P51116 673 aaKnown RBP eCLIP13.05□□□□□ -0.32
LINC00470-205ENST00000580336 ZNF692Q9BU19 519 aaPredicted RBP13.05□□□□□ -0.32
LINC00470-205ENST00000580336 CLEC11AQ9Y240 323 aa13.04□□□□□ -0.32
LINC00470-205ENST00000580336 MKRN4PQ13434 485 aaPredicted RBP13.03□□□□□ -0.32
LINC00470-205ENST00000580336 SPDYE1Q8NFV5 336 aaPredicted RBP13□□□□□ -0.33
LINC00470-205ENST00000580336 SSUH2Q9Y2M2 353 aa12.93□□□□□ -0.34
LINC00470-205ENST00000580336 PRKAR2AP13861 404 aaKnown RBP12.9□□□□□ -0.34
LINC00470-205ENST00000580336 PABPN1Q86U42 306 aaKnown RBP eCLIP12.84□□□□□ -0.35
LINC00470-205ENST00000580336 PRR29P0C7W0 189 aa12.78□□□□□ -0.36
LINC00470-205ENST00000580336 EVX2Q03828 476 aa12.73□□□□□ -0.37
LINC00470-205ENST00000580336 CHADLQ6NUI6 762 aa12.73□□□□□ -0.37
LINC00470-205ENST00000580336 C19orf67A6NJJ6 358 aa12.65□□□□□ -0.38
LINC00470-205ENST00000580336 GABBR2O75899 941 aa12.51□□□□□ -0.41
LINC00470-205ENST00000580336 FARP1Q9Y4F1 1045 aaPredicted RBP12.51□□□□□ -0.41
LINC00470-205ENST00000580336 CD44P16070 742 aaKnown RBP12.5□□□□□ -0.41
LINC00470-205ENST00000580336 SPDYE4A6NLX3 237 aa12.49□□□□□ -0.41
LINC00470-205ENST00000580336 STAG3Q9UJ98 1225 aa12.49□□□□□ -0.41
LINC00470-205ENST00000580336 FKBP8Q14318 412 aa12.46□□□□□ -0.41
LINC00470-205ENST00000580336 CREBZFQ9NS37 354 aa12.34□□□□□ -0.43
LINC00470-205ENST00000580336 ZRANB1Q9UGI0 708 aa12.32□□□□□ -0.44
LINC00470-205ENST00000580336 CLCN6P51797 869 aa12.31□□□□□ -0.44
LINC00470-205ENST00000580336 PAK3O75914 559 aaPredicted RBP12.29□□□□□ -0.44
LINC00470-205ENST00000580336 LHX8Q68G74 356 aa12.27□□□□□ -0.45
LINC00470-205ENST00000580336 DCBLD2Q96PD2 775 aa12.27□□□□□ -0.45
LINC00470-205ENST00000580336 ZNF579Q8NAF0 562 aaKnown RBP12.24□□□□□ -0.45
LINC00470-205ENST00000580336 NPM1P06748 294 aaKnown RBP eCLIP12.23□□□□□ -0.45
LINC00470-205ENST00000580336 PROM2Q8N271 834 aa12.21□□□□□ -0.45
LINC00470-205ENST00000580336 POTEIP0CG38 1075 aa12.17□□□□□ -0.46
LINC00470-205ENST00000580336 GALR2O43603 387 aaPredicted RBP12.11□□□□□ -0.47
LINC00470-205ENST00000580336 PHF12Q96QT6 1004 aa12.11□□□□□ -0.47
LINC00470-205ENST00000580336 PLEKHG5O94827 1062 aa12.06□□□□□ -0.48
LINC00470-205ENST00000580336 MNX1P50219 401 aaPredicted RBP12.05□□□□□ -0.48
LINC00470-205ENST00000580336 TSPYL2Q9H2G4 693 aaPredicted RBP12□□□□□ -0.49
LINC00470-205ENST00000580336 MIER1Q8N108 512 aa11.97□□□□□ -0.49
LINC00470-205ENST00000580336 MS4A3Q96HJ5 214 aa11.93□□□□□ -0.5
LINC00470-205ENST00000580336 PLCD3Q8N3E9 789 aa11.9□□□□□ -0.5
LINC00470-205ENST00000580336 CCDC61Q9Y6R9 512 aa11.84□□□□□ -0.51
Retrieved 100 of 20,778 RNA–protein pairs in 81.5 ms