RNA–Protein interactions for RNA: ENST00000322349.12

EEA1-201, Transcript of early endosome antigen 1, humanhuman

APPRIS P1 TSL 1 (best) BASIC

Gene EEA1, Length 9,875 nt, Biotype protein coding, Subcellular localisation Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
EEA1-201ENST00000322349 DCAF8L2P0C7V8 631 aa18.25■□□□□ 0.51
EEA1-201ENST00000322349 EHMT2Q96KQ7 1210 aa16.88■□□□□ 0.29
EEA1-201ENST00000322349 SUPT5HO00267 1087 aaKnown RBP16.71■□□□□ 0.27
EEA1-201ENST00000322349 SHROOM4Q9ULL8 1493 aa16.4■□□□□ 0.22
EEA1-201ENST00000322349 TTBK1Q5TCY1 1321 aaPredicted RBP16.2■□□□□ 0.18
EEA1-201ENST00000322349 FAM9AQ8IZU1 332 aaPredicted RBP16.19■□□□□ 0.18
EEA1-201ENST00000322349 APLP2Q06481 763 aa16.17■□□□□ 0.18
EEA1-201ENST00000322349 RANGAP1P46060 587 aaPredicted RBP16.13■□□□□ 0.17
EEA1-201ENST00000322349 ATP1B4Q9UN42 357 aaPredicted RBP16.05■□□□□ 0.16
EEA1-201ENST00000322349 PELP1Q8IZL8 1130 aaKnown RBP15.93■□□□□ 0.14
EEA1-201ENST00000322349 MYT1LQ9UL68 1186 aa15.7■□□□□ 0.1
EEA1-201ENST00000322349 CHIC1Q5VXU3 224 aa15.61■□□□□ 0.09
EEA1-201ENST00000322349 PCGF6Q9BYE7 350 aa15.6■□□□□ 0.09
EEA1-201ENST00000322349 ERICH6Q7L0X2 663 aa15.59■□□□□ 0.09
EEA1-201ENST00000322349 NISCHQ9Y2I1 1504 aa15.45■□□□□ 0.06
EEA1-201ENST00000322349 UBTFP17480 764 aaKnown RBP15.42■□□□□ 0.06
EEA1-201ENST00000322349 HNRNPUL2-BSCL2H3BQZ7 746 aaPredicted RBP15.41■□□□□ 0.06
EEA1-201ENST00000322349 HNRNPUL2Q1KMD3 747 aaKnown RBP15.41■□□□□ 0.06
EEA1-201ENST00000322349 POLR3GLQ9BT43 218 aa15.36■□□□□ 0.05
EEA1-201ENST00000322349 CCER1Q8TC90 406 aaPredicted RBP15.33■□□□□ 0.04
EEA1-201ENST00000322349 TRIM41Q8WV44 630 aa15.3■□□□□ 0.04
EEA1-201ENST00000322349 CNGB1Q14028 1251 aaPredicted RBP15.3■□□□□ 0.04
EEA1-201ENST00000322349 SLC4A1APQ9BWU0 796 aaKnown RBP15.28■□□□□ 0.04
EEA1-201ENST00000322349 PPARGC1BQ86YN6 1023 aaKnown RBP15.25■□□□□ 0.03
EEA1-201ENST00000322349 YTHDC1Q96MU7 727 aaKnown RBP15.23■□□□□ 0.03
EEA1-201ENST00000322349 ITGAEP38570 1179 aa15.19■□□□□ 0.02
EEA1-201ENST00000322349 NEFLP07196 543 aa15.13■□□□□ 0.01
EEA1-201ENST00000322349 CENPBP07199 599 aaPredicted RBP15.08■□□□□ 0
EEA1-201ENST00000322349 MYT1Q01538 1121 aa15.04■□□□□ -0
EEA1-201ENST00000322349 DAXXQ9UER7 740 aaPredicted RBP14.97□□□□□ -0.01
EEA1-201ENST00000322349 SLC24A1O60721 1099 aa14.9□□□□□ -0.02
EEA1-201ENST00000322349 PLPPR3Q6T4P5 718 aa14.84□□□□□ -0.03
EEA1-201ENST00000322349 BCANQ96GW7 911 aa14.83□□□□□ -0.03
EEA1-201ENST00000322349 ZEB1P37275 1124 aaPredicted RBP14.81□□□□□ -0.04
EEA1-201ENST00000322349 BCL11AQ9H165 835 aa14.8□□□□□ -0.04
EEA1-201ENST00000322349 FBLN2P98095 1184 aa14.78□□□□□ -0.04
EEA1-201ENST00000322349 CLSPNQ9HAW4 1339 aa14.74□□□□□ -0.05
EEA1-201ENST00000322349 TRIM52Q96A61 297 aa14.66□□□□□ -0.06
EEA1-201ENST00000322349 FAM50AQ14320 339 aaKnown RBP14.64□□□□□ -0.07
EEA1-201ENST00000322349 PABPN1Q86U42 306 aaKnown RBP eCLIP14.61□□□□□ -0.07
EEA1-201ENST00000322349 ZNF326Q5BKZ1 582 aaKnown RBP14.6□□□□□ -0.07
EEA1-201ENST00000322349 ZNF316A6NFI3 1004 aaPredicted RBP14.59□□□□□ -0.07
EEA1-201ENST00000322349 ARID3CA6NKF2 412 aa14.56□□□□□ -0.08
EEA1-201ENST00000322349 NEUROD1Q13562 356 aa14.51□□□□□ -0.09
EEA1-201ENST00000322349 ZBTB47Q9UFB7 747 aaPredicted RBP14.51□□□□□ -0.09
EEA1-201ENST00000322349 ESF1Q9H501 851 aaKnown RBP14.45□□□□□ -0.1
EEA1-201ENST00000322349 LOC105371045A0A1W2PR82 267 aa14.45□□□□□ -0.1
EEA1-201ENST00000322349 A0A0G2JS52 829 aa14.4□□□□□ -0.1
EEA1-201ENST00000322349 SCAF1Q9H7N4 1312 aaKnown RBP14.39□□□□□ -0.11
EEA1-201ENST00000322349 TRIM26Q12899 539 aaPredicted RBP14.37□□□□□ -0.11
EEA1-201ENST00000322349 CANXP27824 592 aaKnown RBP14.36□□□□□ -0.11
EEA1-201ENST00000322349 STAG3Q9UJ98 1225 aa14.36□□□□□ -0.11
EEA1-201ENST00000322349 PLEKHG5O94827 1062 aa14.36□□□□□ -0.11
EEA1-201ENST00000322349 ZNF777Q9ULD5 760 aaPredicted RBP14.34□□□□□ -0.11
EEA1-201ENST00000322349 CHGAP10645 457 aaKnown RBP14.34□□□□□ -0.11
EEA1-201ENST00000322349 NEFMP07197 916 aa14.34□□□□□ -0.11
EEA1-201ENST00000322349 P3H3Q8IVL6 736 aa14.33□□□□□ -0.12
EEA1-201ENST00000322349 ABCC9O60706 1549 aa14.32□□□□□ -0.12
EEA1-201ENST00000322349 RTL5Q5HYW3 569 aaPredicted RBP14.29□□□□□ -0.12
EEA1-201ENST00000322349 SENP3Q9H4L4 574 aaPredicted RBP14.27□□□□□ -0.13
EEA1-201ENST00000322349 ZBTB7CA1YPR0 619 aa14.21□□□□□ -0.13
EEA1-201ENST00000322349 HRCP23327 699 aa14.21□□□□□ -0.13
EEA1-201ENST00000322349 NPM1P06748 294 aaKnown RBP eCLIP14.18□□□□□ -0.14
EEA1-201ENST00000322349 ANP32CO43423 234 aa14.09□□□□□ -0.15
EEA1-201ENST00000322349 C14orf37Q86TY3 774 aa14.07□□□□□ -0.16
EEA1-201ENST00000322349 GRWD1Q9BQ67 446 aaKnown RBP eCLIP14.06□□□□□ -0.161e-6■■■□□ 17.3
EEA1-201ENST00000322349 DIEXFQ68CQ4 756 aaKnown RBP14.05□□□□□ -0.16
EEA1-201ENST00000322349 NPM2Q86SE8 214 aaKnown RBP14□□□□□ -0.17
EEA1-201ENST00000322349 HAP1P54257 671 aaPredicted RBP14□□□□□ -0.17
EEA1-201ENST00000322349 SALL2Q9Y467 1007 aaPredicted RBP13.99□□□□□ -0.17
EEA1-201ENST00000322349 ARXQ96QS3 562 aa13.98□□□□□ -0.17
EEA1-201ENST00000322349 TULP1O00294 542 aaPredicted RBP13.97□□□□□ -0.17
EEA1-201ENST00000322349 CDK11AQ9UQ88 783 aaPredicted RBP13.95□□□□□ -0.18
EEA1-201ENST00000322349 ARID4BQ4LE39 1312 aaPredicted RBP13.94□□□□□ -0.18
EEA1-201ENST00000322349 HSP90AA1P07900 732 aaKnown RBP13.93□□□□□ -0.18
EEA1-201ENST00000322349 PPP1R15AO75807 674 aaPredicted RBP13.85□□□□□ -0.19
EEA1-201ENST00000322349 KDM2AQ9Y2K7 1162 aa13.85□□□□□ -0.19
EEA1-201ENST00000322349 CHIC2Q9UKJ5 165 aa13.84□□□□□ -0.19
EEA1-201ENST00000322349 TRHP20396 242 aaPredicted RBP13.83□□□□□ -0.2
EEA1-201ENST00000322349 KCNH8Q96L42 1107 aa13.82□□□□□ -0.2
EEA1-201ENST00000322349 CDK11BP21127 795 aaKnown RBP13.82□□□□□ -0.2
EEA1-201ENST00000322349 NPHP1O15259 732 aa13.81□□□□□ -0.2
EEA1-201ENST00000322349 LMOD2Q6P5Q4 547 aa13.8□□□□□ -0.2
EEA1-201ENST00000322349 FAM9BQ8IZU0 186 aa13.77□□□□□ -0.21
EEA1-201ENST00000322349 NCBP3Q53F19 620 aaKnown RBP13.76□□□□□ -0.21
EEA1-201ENST00000322349 TAOK2Q9UL54 1235 aa13.75□□□□□ -0.21
EEA1-201ENST00000322349 CHMP7Q8WUX9 453 aaPredicted RBP13.75□□□□□ -0.21
EEA1-201ENST00000322349 ANP32BQ92688 251 aaKnown RBP13.75□□□□□ -0.21
EEA1-201ENST00000322349 ANP32AP39687 249 aaKnown RBP13.74□□□□□ -0.21
EEA1-201ENST00000322349 WDR43Q15061 677 aaKnown RBP eCLIP13.7□□□□□ -0.22
EEA1-201ENST00000322349 UPF2Q9HAU5 1272 aaKnown RBP13.7□□□□□ -0.22
EEA1-201ENST00000322349 PPM1GO15355 546 aaPredicted RBP13.69□□□□□ -0.22
EEA1-201ENST00000322349 TMC1Q8TDI8 760 aa13.69□□□□□ -0.22
EEA1-201ENST00000322349 GTF3C3Q9Y5Q9 886 aa13.69□□□□□ -0.22
EEA1-201ENST00000322349 TPRNQ4KMQ1 711 aa13.68□□□□□ -0.22
EEA1-201ENST00000322349 TONSLQ96HA7 1378 aa13.65□□□□□ -0.22
EEA1-201ENST00000322349 TSPY4P0CV99 314 aa13.65□□□□□ -0.22
EEA1-201ENST00000322349 TSPY10P0CW01 314 aa13.65□□□□□ -0.22
EEA1-201ENST00000322349 MYH16Q9H6N6 1097 aa13.63□□□□□ -0.23
EEA1-201ENST00000322349 HNRNPUQ00839 825 aaKnown RBP eCLIP13.61□□□□□ -0.23
Retrieved 100 of 20,778 RNA–protein pairs in 86.2 ms