RNA–Protein interactions for RNA: ENST00000423414.5

LINC-PINT-202, long intergenic non-protein coding RNA, p53 induced transcript, humanhuman

TSL 4

Gene LINC-PINT, Length 616 nt, Biotype antisense RNA, Subcellular localisation Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
LINC-PINT-202ENST00000423414 NISCHQ9Y2I1 1504 aa56.14■■■■■ 6.58
LINC-PINT-202ENST00000423414 CCDC180Q9P1Z9 1646 aa49.91■■■■■ 5.58
LINC-PINT-202ENST00000423414 ABCC9O60706 1549 aa49.14■■■■■ 5.46
LINC-PINT-202ENST00000423414 RB1CC1Q8TDY2 1594 aa47.08■■■■■ 5.13
LINC-PINT-202ENST00000423414 NACADO15069 1562 aa47.01■■■■■ 5.12
LINC-PINT-202ENST00000423414 DCAF8L2P0C7V8 631 aa46.92■■■■■ 5.1
LINC-PINT-202ENST00000423414 ZCCHC6Q5VYS8 1495 aaKnown RBP46.7■■■■■ 5.07
LINC-PINT-202ENST00000423414 MYO15BQ96JP2 1530 aa46.68■■■■■ 5.06
LINC-PINT-202ENST00000423414 DCAF1Q9Y4B6 1507 aa46.41■■■■■ 5.02
LINC-PINT-202ENST00000423414 UNC13AQ9UPW8 1703 aa46.11■■■■■ 4.97
LINC-PINT-202ENST00000423414 PABPN1Q86U42 306 aaKnown RBP eCLIP45.94■■■■■ 4.94
LINC-PINT-202ENST00000423414 BICRAQ9NZM4 1560 aa45.84■■■■■ 4.93
LINC-PINT-202ENST00000423414 SCRIBQ14160 1630 aa45.56■■■■■ 4.88
LINC-PINT-202ENST00000423414 DNAJC5BQ9UF47 199 aa45.5■■■■■ 4.87
LINC-PINT-202ENST00000423414 SHROOM4Q9ULL8 1493 aa45.15■■■■■ 4.82
LINC-PINT-202ENST00000423414 EIF4G1Q04637 1599 aaKnown RBP44.56■■■■■ 4.72
LINC-PINT-202ENST00000423414 CC2D2AQ9P2K1 1620 aa44.43■■■■■ 4.7
LINC-PINT-202ENST00000423414 CECR2Q9BXF3 1484 aa44.16■■■■■ 4.66
LINC-PINT-202ENST00000423414 SMARCA4P51532 1647 aa43.58■■■■■ 4.57
LINC-PINT-202ENST00000423414 NCAPD3P42695 1498 aa43.45■■■■■ 4.55
LINC-PINT-202ENST00000423414 BAZ1AQ9NRL2 1556 aaPredicted RBP43.45■■■■■ 4.55
LINC-PINT-202ENST00000423414 ATAD2BQ9ULI0 1458 aa43.45■■■■■ 4.55
LINC-PINT-202ENST00000423414 MROH2BQ7Z745 1585 aa43.3■■■■■ 4.52
LINC-PINT-202ENST00000423414 SMARCA2P51531 1590 aa43.29■■■■■ 4.52
LINC-PINT-202ENST00000423414 PEG3Q9GZU2 1588 aa43.17■■■■■ 4.5
LINC-PINT-202ENST00000423414 HMGXB3Q12766 1538 aa43.15■■■■■ 4.5
LINC-PINT-202ENST00000423414 BAZ1BQ9UIG0 1483 aaKnown RBP42.99■■■■■ 4.47
LINC-PINT-202ENST00000423414 WIZO95785 1651 aa42.79■■■■■ 4.44
LINC-PINT-202ENST00000423414 RSF1Q96T23 1441 aaPredicted RBP42.72■■■■■ 4.43
LINC-PINT-202ENST00000423414 NESP48681 1621 aa42.52■■■■■ 4.4
LINC-PINT-202ENST00000423414 TOP2AP11388 1531 aaKnown RBP42.27■■■■■ 4.36
LINC-PINT-202ENST00000423414 ERCC6Q03468 1493 aa42.27■■■■■ 4.36
LINC-PINT-202ENST00000423414 LAMC3Q9Y6N6 1575 aa42.25■■■■■ 4.35
LINC-PINT-202ENST00000423414 CADPSQ9ULU8 1353 aa42.15■■■■■ 4.34
LINC-PINT-202ENST00000423414 PDS5BQ9NTI5 1447 aa41.97■■■■■ 4.31
LINC-PINT-202ENST00000423414 CUX2O14529 1486 aa41.94■■■■■ 4.3
LINC-PINT-202ENST00000423414 KIF21AQ7Z4S6 1674 aa41.93■■■■■ 4.3
LINC-PINT-202ENST00000423414 CFTRP13569 1480 aa41.87■■■■■ 4.29
LINC-PINT-202ENST00000423414 THOC2Q8NI27 1593 aaKnown RBP41.86■■■■■ 4.29
LINC-PINT-202ENST00000423414 CCDC88BA6NC98 1476 aa41.85■■■■■ 4.29
LINC-PINT-202ENST00000423414 FANCD2Q9BXW9 1451 aa41.65■■■■■ 4.26
LINC-PINT-202ENST00000423414 MRC2Q9UBG0 1479 aa41.59■■■■■ 4.25
LINC-PINT-202ENST00000423414 CEP164Q9UPV0 1460 aa41.57■■■■■ 4.25
LINC-PINT-202ENST00000423414 WDR62O43379 1518 aa41.48■■■■■ 4.23
LINC-PINT-202ENST00000423414 PRDM2Q13029 1718 aa41.41■■■■■ 4.22
LINC-PINT-202ENST00000423414 SUPT5HO00267 1087 aaKnown RBP41.39■■■■■ 4.22
LINC-PINT-202ENST00000423414 URB2Q14146 1524 aaKnown RBP41.31■■■■■ 4.2
LINC-PINT-202ENST00000423414 DNAJC5Q9H3Z4 198 aa41.04■■■■■ 4.16
LINC-PINT-202ENST00000423414 TOPBP1Q92547 1522 aa40.98■■■■■ 4.15
LINC-PINT-202ENST00000423414 ABCC8Q09428 1581 aa40.86■■■■■ 4.13
LINC-PINT-202ENST00000423414 DNMBPQ6XZF7 1577 aa40.86■■■■■ 4.13
LINC-PINT-202ENST00000423414 IFT140Q96RY7 1462 aa40.72■■■■■ 4.11
LINC-PINT-202ENST00000423414 ZNF608Q9ULD9 1512 aaPredicted RBP40.67■■■■■ 4.1
LINC-PINT-202ENST00000423414 CUX1P39880 1505 aa40.62■■■■■ 4.09
LINC-PINT-202ENST00000423414 POLA1P09884 1462 aaPredicted RBP40.62■■■■■ 4.09
LINC-PINT-202ENST00000423414 TARBP1Q13395 1621 aaKnown RBP40.58■■■■■ 4.09
LINC-PINT-202ENST00000423414 RAD54L2Q9Y4B4 1467 aa40.48■■■■■ 4.07
LINC-PINT-202ENST00000423414 FGD5Q6ZNL6 1462 aa40.47■■■■■ 4.07
LINC-PINT-202ENST00000423414 SOGA1O94964 1423 aa40.42■■■■■ 4.06
LINC-PINT-202ENST00000423414 EIF4G3O43432 1585 aaKnown RBP40.4■■■■■ 4.06
LINC-PINT-202ENST00000423414 AQRO60306 1485 aaKnown RBP eCLIP40.39■■■■■ 4.06
LINC-PINT-202ENST00000423414 TDRD9Q8NDG6 1382 aaKnown RBP40.27■■■■■ 4.04
LINC-PINT-202ENST00000423414 WRNQ14191 1432 aaPredicted RBP eCLIP40.2■■■■■ 4.03
LINC-PINT-202ENST00000423414 OSCARQ8IYS5 282 aa40.19■■■■■ 4.02
LINC-PINT-202ENST00000423414 SYNJ1O43426 1573 aa40.18■■■■■ 4.02
LINC-PINT-202ENST00000423414 TOP2BQ02880 1626 aa40.15■■■■■ 4.02
LINC-PINT-202ENST00000423414 WDR97A6NE52 1622 aa40.14■■■■■ 4.02
LINC-PINT-202ENST00000423414 BIVM-ERCC5R4GMW8 1640 aa40.14■■■■■ 4.02
LINC-PINT-202ENST00000423414 ABCA10Q8WWZ4 1543 aa40.06■■■■■ 4
LINC-PINT-202ENST00000423414 GRIN2BQ13224 1484 aa39.95■■■■□ 3.99
LINC-PINT-202ENST00000423414 SNAPC4Q5SXM2 1469 aa39.95■■■■□ 3.99
LINC-PINT-202ENST00000423414 GAPVD1Q14C86 1478 aa39.94■■■■□ 3.98
LINC-PINT-202ENST00000423414 CHD1O14646 1710 aa39.94■■■■□ 3.98
LINC-PINT-202ENST00000423414 ABCA5Q8WWZ7 1642 aa39.93■■■■□ 3.98
LINC-PINT-202ENST00000423414 MAGI1Q96QZ7 1491 aaPredicted RBP39.86■■■■□ 3.97
LINC-PINT-202ENST00000423414 FBLN2P98095 1184 aa39.85■■■■□ 3.97
LINC-PINT-202ENST00000423414 PBRM1Q86U86 1689 aa39.83■■■■□ 3.97
LINC-PINT-202ENST00000423414 SYNJ2O15056 1496 aa39.73■■■■□ 3.95
LINC-PINT-202ENST00000423414 CHMP7Q8WUX9 453 aaPredicted RBP39.7■■■■□ 3.95
LINC-PINT-202ENST00000423414 RIMBP3CA6NJZ7 1639 aa39.6■■■■□ 3.93
LINC-PINT-202ENST00000423414 RIMBP3BA6NNM3 1639 aa39.6■■■■□ 3.93
LINC-PINT-202ENST00000423414 RIMBP3Q9UFD9 1639 aa39.6■■■■□ 3.93
LINC-PINT-202ENST00000423414 ARHGEF11O15085 1522 aa39.57■■■■□ 3.93
LINC-PINT-202ENST00000423414 CLASP1Q7Z460 1538 aa39.55■■■■□ 3.92
LINC-PINT-202ENST00000423414 ERICH3Q5RHP9 1530 aa39.55■■■■□ 3.92
LINC-PINT-202ENST00000423414 ADAMTS12P58397 1594 aa39.55■■■■□ 3.92
LINC-PINT-202ENST00000423414 TRIM41Q8WV44 630 aa39.51■■■■□ 3.92
LINC-PINT-202ENST00000423414 FHAD1B1AJZ9 1412 aa39.47■■■■□ 3.91
LINC-PINT-202ENST00000423414 GRIN2AQ12879 1464 aa39.46■■■■□ 3.91
LINC-PINT-202ENST00000423414 KIF27Q86VH2 1401 aa39.35■■■■□ 3.89
LINC-PINT-202ENST00000423414 IGF1RP08069 1367 aa39.34■■■■□ 3.89
LINC-PINT-202ENST00000423414 NUP160Q12769 1436 aa39.33■■■■□ 3.89
LINC-PINT-202ENST00000423414 CEP170Q5SW79 1584 aa39.31■■■■□ 3.88
LINC-PINT-202ENST00000423414 ARAP1Q96P48 1450 aa39.27■■■■□ 3.88
LINC-PINT-202ENST00000423414 CYB5RLQ6IPT4 315 aa39.22■■■■□ 3.87
LINC-PINT-202ENST00000423414 CUL7Q14999 1698 aa39.09■■■■□ 3.85
LINC-PINT-202ENST00000423414 RUSC2Q8N2Y8 1516 aa39.09■■■■□ 3.85
LINC-PINT-202ENST00000423414 ERCC6L2Q5T890 1561 aa39.06■■■■□ 3.84
LINC-PINT-202ENST00000423414 SHROOM2Q13796 1616 aa39.05■■■■□ 3.84
LINC-PINT-202ENST00000423414 CARMIL1Q5VZK9 1371 aa39.03■■■■□ 3.84
Retrieved 100 of 20,778 RNA–protein pairs in 72.5 ms