RNA–Protein interactions for RNA: ENST00000620040.4

DMD-230, Transcript of dystrophin, humanhuman

APPRIS ALT2 TSL 5 BASIC

Gene DMD, Length 13,746 nt, Biotype protein coding.

Download Table  
RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
DMD-230ENST00000620040 PELP1Q8IZL8 1130 aaKnown RBP7.04□□□□□ -1.28
DMD-230ENST00000620040 MYT1Q01538 1121 aa7.02□□□□□ -1.29
DMD-230ENST00000620040 NISCHQ9Y2I1 1504 aa6.88□□□□□ -1.31
DMD-230ENST00000620040 CCER1Q8TC90 406 aaPredicted RBP6.67□□□□□ -1.34
DMD-230ENST00000620040 ERICH6Q7L0X2 663 aa6.62□□□□□ -1.35
DMD-230ENST00000620040 CENPBP07199 599 aaPredicted RBP6.6□□□□□ -1.35
DMD-230ENST00000620040 TTBK1Q5TCY1 1321 aaPredicted RBP6.52□□□□□ -1.37
DMD-230ENST00000620040 ZEB1P37275 1124 aaPredicted RBP6.5□□□□□ -1.37
DMD-230ENST00000620040 YTHDC1Q96MU7 727 aaKnown RBP6.49□□□□□ -1.37
DMD-230ENST00000620040 NEFLP07196 543 aa6.38□□□□□ -1.39
DMD-230ENST00000620040 HRCP23327 699 aa6.37□□□□□ -1.39
DMD-230ENST00000620040 DCAF8L2P0C7V8 631 aa6.36□□□□□ -1.39
DMD-230ENST00000620040 SUPT5HO00267 1087 aaKnown RBP6.33□□□□□ -1.4
DMD-230ENST00000620040 APLP2Q06481 763 aa6.33□□□□□ -1.4
DMD-230ENST00000620040 PCGF6Q9BYE7 350 aa6.27□□□□□ -1.41
DMD-230ENST00000620040 DAXXQ9UER7 740 aaPredicted RBP6.25□□□□□ -1.41
DMD-230ENST00000620040 EHMT2Q96KQ7 1210 aa6.22□□□□□ -1.41
DMD-230ENST00000620040 CCDC180Q9P1Z9 1646 aa6.21□□□□□ -1.42
DMD-230ENST00000620040 RTL5Q5HYW3 569 aaPredicted RBP6.2□□□□□ -1.42
DMD-230ENST00000620040 FAM9AQ8IZU1 332 aaPredicted RBP6.14□□□□□ -1.43
DMD-230ENST00000620040 GLIPR1L2Q4G1C9 344 aa6.14□□□□□ -1.43
DMD-230ENST00000620040 DCAF1Q9Y4B6 1507 aa6.11□□□□□ -1.43
DMD-230ENST00000620040 ZNF316A6NFI3 1004 aaPredicted RBP6.09□□□□□ -1.44
DMD-230ENST00000620040 MYT1LQ9UL68 1186 aa6.09□□□□□ -1.44
DMD-230ENST00000620040 TRIM26Q12899 539 aaPredicted RBP6.08□□□□□ -1.44
DMD-230ENST00000620040 SHROOM4Q9ULL8 1493 aa6.07□□□□□ -1.44
DMD-230ENST00000620040 CLSPNQ9HAW4 1339 aa6.04□□□□□ -1.44
DMD-230ENST00000620040 PPARGC1BQ86YN6 1023 aaKnown RBP6.02□□□□□ -1.45
DMD-230ENST00000620040 MYO15BQ96JP2 1530 aa5.98□□□□□ -1.45
DMD-230ENST00000620040 ACIN1Q9UKV3 1341 aaKnown RBP5.98□□□□□ -1.45
DMD-230ENST00000620040 SCAF1Q9H7N4 1312 aaKnown RBP5.95□□□□□ -1.46
DMD-230ENST00000620040 CDK11AQ9UQ88 783 aaPredicted RBP5.95□□□□□ -1.46
DMD-230ENST00000620040 TRIM41Q8WV44 630 aa5.94□□□□□ -1.46
DMD-230ENST00000620040 DIEXFQ68CQ4 756 aaKnown RBP5.94□□□□□ -1.46
DMD-230ENST00000620040 GTF3C3Q9Y5Q9 886 aa5.92□□□□□ -1.46
DMD-230ENST00000620040 ANP32AP39687 249 aaKnown RBP5.91□□□□□ -1.46
DMD-230ENST00000620040 EIF5BO60841 1220 aaKnown RBP5.91□□□□□ -1.46
DMD-230ENST00000620040 ANP32BQ92688 251 aaKnown RBP5.89□□□□□ -1.47
DMD-230ENST00000620040 CHIC1Q5VXU3 224 aa5.89□□□□□ -1.47
DMD-230ENST00000620040 UBTFP17480 764 aaKnown RBP5.86□□□□□ -1.47
DMD-230ENST00000620040 TNNT2P45379 298 aaPredicted RBP5.82□□□□□ -1.48
DMD-230ENST00000620040 ZCCHC6Q5VYS8 1495 aaKnown RBP5.8□□□□□ -1.48
DMD-230ENST00000620040 BCL11AQ9H165 835 aa5.8□□□□□ -1.48
DMD-230ENST00000620040 ZBTB47Q9UFB7 747 aaPredicted RBP5.79□□□□□ -1.48
DMD-230ENST00000620040 ATP1B4Q9UN42 357 aaPredicted RBP5.79□□□□□ -1.48
DMD-230ENST00000620040 NEUROD1Q13562 356 aa5.78□□□□□ -1.48
DMD-230ENST00000620040 RANGAP1P46060 587 aaPredicted RBP5.78□□□□□ -1.48
DMD-230ENST00000620040 ANP32EQ9BTT0 268 aa5.78□□□□□ -1.48
DMD-230ENST00000620040 ANP32CO43423 234 aa5.78□□□□□ -1.48
DMD-230ENST00000620040 BCANQ96GW7 911 aa5.76□□□□□ -1.49
DMD-230ENST00000620040 TRIM44Q96DX7 344 aaPredicted RBP5.76□□□□□ -1.49
DMD-230ENST00000620040 UPF2Q9HAU5 1272 aaKnown RBP5.75□□□□□ -1.49
DMD-230ENST00000620040 NCLP19338 710 aaKnown RBP5.74□□□□□ -1.49
DMD-230ENST00000620040 POLR3GLQ9BT43 218 aa5.74□□□□□ -1.49
DMD-230ENST00000620040 NACADO15069 1562 aa5.74□□□□□ -1.49
DMD-230ENST00000620040 EEA1Q15075 1411 aa5.73□□□□□ -1.49
DMD-230ENST00000620040 ERICH6BQ5W0A0 696 aa5.72□□□□□ -1.49
DMD-230ENST00000620040 CDK11BP21127 795 aaKnown RBP5.71□□□□□ -1.5
DMD-230ENST00000620040 HNRNPUL2-BSCL2H3BQZ7 746 aaPredicted RBP5.7□□□□□ -1.5
DMD-230ENST00000620040 CANXP27824 592 aaKnown RBP5.7□□□□□ -1.5
DMD-230ENST00000620040 HSP90AA1P07900 732 aaKnown RBP5.7□□□□□ -1.5
DMD-230ENST00000620040 HNRNPUL2Q1KMD3 747 aaKnown RBP5.69□□□□□ -1.5
DMD-230ENST00000620040 NEFMP07197 916 aa5.69□□□□□ -1.5
DMD-230ENST00000620040 DDRGK1Q96HY6 314 aa5.68□□□□□ -1.5
DMD-230ENST00000620040 NPM2Q86SE8 214 aaKnown RBP5.67□□□□□ -1.5
DMD-230ENST00000620040 LOC105371045A0A1W2PR82 267 aa5.66□□□□□ -1.5
DMD-230ENST00000620040 NBR1Q14596 966 aa5.65□□□□□ -1.5
DMD-230ENST00000620040 FKBP8Q14318 412 aa5.65□□□□□ -1.5
DMD-230ENST00000620040 ITGAEP38570 1179 aa5.65□□□□□ -1.5
DMD-230ENST00000620040 CNGB1Q14028 1251 aaPredicted RBP5.65□□□□□ -1.51
DMD-230ENST00000620040 RTN4Q9NQC3 1192 aaKnown RBP5.64□□□□□ -1.51
DMD-230ENST00000620040 BECN1Q14457 450 aa5.63□□□□□ -1.51
DMD-230ENST00000620040 PPM1GO15355 546 aaPredicted RBP5.63□□□□□ -1.51
DMD-230ENST00000620040 AMER1Q5JTC6 1135 aaPredicted RBP5.62□□□□□ -1.51
DMD-230ENST00000620040 ZBTB4Q9P1Z0 1013 aaPredicted RBP5.62□□□□□ -1.51
DMD-230ENST00000620040 GOLGA6L22H0YM25 854 aa5.61□□□□□ -1.51
DMD-230ENST00000620040 SLC4A1APQ9BWU0 796 aaKnown RBP5.61□□□□□ -1.51
DMD-230ENST00000620040 GOLGA6L2Q8N9W4 650 aaPredicted RBP5.6□□□□□ -1.51
DMD-230ENST00000620040 NAP1L5Q96NT1 182 aaPredicted RBP5.6□□□□□ -1.51
DMD-230ENST00000620040 CCDC136Q96JN2 1154 aa5.6□□□□□ -1.51
DMD-230ENST00000620040 RB1CC1Q8TDY2 1594 aa5.6□□□□□ -1.51
DMD-230ENST00000620040 BAZ1BQ9UIG0 1483 aaKnown RBP5.58□□□□□ -1.52
DMD-230ENST00000620040 PRKCSHP14314 528 aaPredicted RBP5.58□□□□□ -1.52
DMD-230ENST00000620040 ABCC9O60706 1549 aa5.57□□□□□ -1.52
DMD-230ENST00000620040 CHAF1AQ13111 956 aaPredicted RBP5.56□□□□□ -1.52
DMD-230ENST00000620040 L1TD1Q5T7N2 865 aaKnown RBP5.56□□□□□ -1.52
DMD-230ENST00000620040 DNTTIP2Q5QJE6 756 aaKnown RBP5.55□□□□□ -1.52
DMD-230ENST00000620040 HNRNPUQ00839 825 aaKnown RBP eCLIP5.55□□□□□ -1.52
DMD-230ENST00000620040 FAM50AQ14320 339 aaKnown RBP5.55□□□□□ -1.52
DMD-230ENST00000620040 GOLGA6L6A8MZA4 724 aa5.55□□□□□ -1.52
DMD-230ENST00000620040 PTMAP06454 111 aaKnown RBP5.55□□□□□ -1.52
DMD-230ENST00000620040 SUPT16HQ9Y5B9 1047 aaKnown RBP5.54□□□□□ -1.52
DMD-230ENST00000620040 BAZ1AQ9NRL2 1556 aaPredicted RBP5.54□□□□□ -1.52
DMD-230ENST00000620040 TRIM52Q96A61 297 aa5.54□□□□□ -1.52
DMD-230ENST00000620040 CSRNP3Q8WYN3 585 aa5.54□□□□□ -1.52
DMD-230ENST00000620040 NOP58Q9Y2X3 529 aaKnown RBP5.54□□□□□ -1.52
DMD-230ENST00000620040 ZNF326Q5BKZ1 582 aaKnown RBP5.54□□□□□ -1.52
DMD-230ENST00000620040 ARXQ96QS3 562 aa5.54□□□□□ -1.52
DMD-230ENST00000620040 SLC24A1O60721 1099 aa5.52□□□□□ -1.53
DMD-230ENST00000620040 NRDCO43847 1150 aa5.52□□□□□ -1.53
Retrieved 100 of 20,778 RNA–protein pairs in 37 ms