RNA–Protein interactions for RNA: ENST00000479853.1

SDHAF3-203, Transcript of succinate dehydrogenase complex assembly factor 3, humanhuman

TSL 2

Gene SDHAF3, Length 774 nt, Biotype processed transcript, Subcellular localisation Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SDHAF3-203ENST00000479853 AEBP2Q6ZN18 517 aaPredicted RBP25.55■■□□□ 1.68
SDHAF3-203ENST00000479853 CHIC1Q5VXU3 224 aa24.17■■□□□ 1.46
SDHAF3-203ENST00000479853 SENP3Q9H4L4 574 aaPredicted RBP21.72■■□□□ 1.07
SDHAF3-203ENST00000479853 PHF23Q9BUL5 403 aaPredicted RBP21.45■■□□□ 1.02
SDHAF3-203ENST00000479853 FOXD1Q16676 465 aa20.29■□□□□ 0.84
SDHAF3-203ENST00000479853 PLPPR3Q6T4P5 718 aa19.23■□□□□ 0.67
SDHAF3-203ENST00000479853 MSH5O43196 834 aa18.97■□□□□ 0.63
SDHAF3-203ENST00000479853 PPP6R1Q9UPN7 881 aa18.95■□□□□ 0.62
SDHAF3-203ENST00000479853 PIAS4Q8N2W9 510 aaPredicted RBP18.86■□□□□ 0.61
SDHAF3-203ENST00000479853 ADRA2BP18089 450 aa18.82■□□□□ 0.6
SDHAF3-203ENST00000479853 POTEDQ86YR6 584 aa18.66■□□□□ 0.58
SDHAF3-203ENST00000479853 MAPK8IP2Q13387 824 aaPredicted RBP17.32■□□□□ 0.36
SDHAF3-203ENST00000479853 DMRT2Q9Y5R5 561 aa17.26■□□□□ 0.35
SDHAF3-203ENST00000479853 SCAF1Q9H7N4 1312 aaKnown RBP17.17■□□□□ 0.34
SDHAF3-203ENST00000479853 PPP4R3CPQ6ZMV5 832 aa16.85■□□□□ 0.29
SDHAF3-203ENST00000479853 HOXD11P31277 338 aaPredicted RBP16.64■□□□□ 0.25
SDHAF3-203ENST00000479853 CNKSR2Q8WXI2 1034 aa16.56■□□□□ 0.24
SDHAF3-203ENST00000479853 RNF216Q9NWF9 866 aaPredicted RBP16.45■□□□□ 0.22
SDHAF3-203ENST00000479853 DCAF8L1A6NGE4 600 aa16.33■□□□□ 0.2
SDHAF3-203ENST00000479853 CACNB1Q02641 598 aaPredicted RBP16.24■□□□□ 0.19
SDHAF3-203ENST00000479853 RNF39Q9H2S5 420 aa16.24■□□□□ 0.19
SDHAF3-203ENST00000479853 DNAJC5BQ9UF47 199 aa16.14■□□□□ 0.17
SDHAF3-203ENST00000479853 NCBP3Q53F19 620 aaKnown RBP16.12■□□□□ 0.17
SDHAF3-203ENST00000479853 NPM3O75607 178 aaKnown RBP15.97■□□□□ 0.15
SDHAF3-203ENST00000479853 C1QBPQ07021 282 aaKnown RBP15.97■□□□□ 0.15
SDHAF3-203ENST00000479853 GRWD1Q9BQ67 446 aaKnown RBP eCLIP15.69■□□□□ 0.1
SDHAF3-203ENST00000479853 KCNA4P22459 653 aa15.58■□□□□ 0.08
SDHAF3-203ENST00000479853 U3KPZ7 1027 aaPredicted RBP15.47■□□□□ 0.07
SDHAF3-203ENST00000479853 SLC4A2P04920 1241 aa15.32■□□□□ 0.04
SDHAF3-203ENST00000479853 SPINK5Q9NQ38 1064 aaPredicted RBP15.23■□□□□ 0.03
SDHAF3-203ENST00000479853 DSG3P32926 999 aa15.17■□□□□ 0.02
SDHAF3-203ENST00000479853 CAPN15O75808 1086 aa15.11■□□□□ 0.01
SDHAF3-203ENST00000479853 HNRNPUL2-BSCL2H3BQZ7 746 aaPredicted RBP14.92□□□□□ -0.02
SDHAF3-203ENST00000479853 APLP2Q06481 763 aa14.92□□□□□ -0.02
SDHAF3-203ENST00000479853 HNRNPUL2Q1KMD3 747 aaKnown RBP14.92□□□□□ -0.02
SDHAF3-203ENST00000479853 ZNF219Q9P2Y4 722 aaPredicted RBP14.88□□□□□ -0.03
SDHAF3-203ENST00000479853 TRHP20396 242 aaPredicted RBP14.85□□□□□ -0.03
SDHAF3-203ENST00000479853 SAMD1Q6SPF0 538 aaPredicted RBP14.85□□□□□ -0.03
SDHAF3-203ENST00000479853 ABCB7O75027 752 aa14.77□□□□□ -0.05
SDHAF3-203ENST00000479853 MYCNP04198 464 aaPredicted RBP14.74□□□□□ -0.05
SDHAF3-203ENST00000479853 SLC4A1APQ9BWU0 796 aaKnown RBP14.64□□□□□ -0.07
SDHAF3-203ENST00000479853 POTEHQ6S545 545 aa14.58□□□□□ -0.08
SDHAF3-203ENST00000479853 FOXD4L1Q9NU39 408 aa14.56□□□□□ -0.08
SDHAF3-203ENST00000479853 POLA2Q14181 598 aa14.49□□□□□ -0.09
SDHAF3-203ENST00000479853 ATF5Q9Y2D1 282 aaPredicted RBP14.45□□□□□ -0.1
SDHAF3-203ENST00000479853 RBM42Q9BTD8 480 aaKnown RBP14.41□□□□□ -0.1
SDHAF3-203ENST00000479853 ZBTB22O15209 634 aa14.38□□□□□ -0.11
SDHAF3-203ENST00000479853 ZBTB12Q9Y330 459 aaPredicted RBP14.18□□□□□ -0.14
SDHAF3-203ENST00000479853 ATXN8OSP0DMR3 200 aa14.17□□□□□ -0.14
SDHAF3-203ENST00000479853 CHRDL2Q6WN34 429 aa14.13□□□□□ -0.15
SDHAF3-203ENST00000479853 AKT1S1Q96B36 256 aa14.11□□□□□ -0.15
SDHAF3-203ENST00000479853 OSCARQ8IYS5 282 aa14.03□□□□□ -0.16
SDHAF3-203ENST00000479853 REM2Q8IYK8 340 aaPredicted RBP13.96□□□□□ -0.17
SDHAF3-203ENST00000479853 PITPNM1O00562 1244 aa13.81□□□□□ -0.2
SDHAF3-203ENST00000479853 PIP4P2Q8N4L2 257 aa13.81□□□□□ -0.2
SDHAF3-203ENST00000479853 MKRN4PQ13434 485 aaPredicted RBP13.8□□□□□ -0.2
SDHAF3-203ENST00000479853 SPDYE2BA6NHP3 402 aa13.79□□□□□ -0.2
SDHAF3-203ENST00000479853 SPDYE6P0CI01 402 aa13.79□□□□□ -0.2
SDHAF3-203ENST00000479853 SPDYE2Q495Y8 402 aa13.79□□□□□ -0.2
SDHAF3-203ENST00000479853 FXR2P51116 673 aaKnown RBP eCLIP13.77□□□□□ -0.21
SDHAF3-203ENST00000479853 FBLN2P98095 1184 aa13.77□□□□□ -0.21
SDHAF3-203ENST00000479853 SSUH2Q9Y2M2 353 aa13.65□□□□□ -0.22
SDHAF3-203ENST00000479853 SP7Q8TDD2 431 aaPredicted RBP13.64□□□□□ -0.23
SDHAF3-203ENST00000479853 CSRNP3Q8WYN3 585 aa13.64□□□□□ -0.23
SDHAF3-203ENST00000479853 ZNF692Q9BU19 519 aaPredicted RBP13.55□□□□□ -0.24
SDHAF3-203ENST00000479853 SPDYE1Q8NFV5 336 aaPredicted RBP13.52□□□□□ -0.25
SDHAF3-203ENST00000479853 HAX1O00165 279 aa13.48□□□□□ -0.25
SDHAF3-203ENST00000479853 EVX2Q03828 476 aa13.44□□□□□ -0.26
SDHAF3-203ENST00000479853 CLEC11AQ9Y240 323 aa13.42□□□□□ -0.26
SDHAF3-203ENST00000479853 PRKAR2AP13861 404 aaKnown RBP13.41□□□□□ -0.26
SDHAF3-203ENST00000479853 PABPN1Q86U42 306 aaKnown RBP eCLIP13.36□□□□□ -0.27
SDHAF3-203ENST00000479853 C19orf67A6NJJ6 358 aa13.32□□□□□ -0.28
SDHAF3-203ENST00000479853 EHMT2Q96KQ7 1210 aa13.27□□□□□ -0.29
SDHAF3-203ENST00000479853 PRR29P0C7W0 189 aa13.24□□□□□ -0.29
SDHAF3-203ENST00000479853 CHADLQ6NUI6 762 aa13.24□□□□□ -0.29
SDHAF3-203ENST00000479853 GABBR2O75899 941 aa13.1□□□□□ -0.31
SDHAF3-203ENST00000479853 FARP1Q9Y4F1 1045 aaPredicted RBP13.08□□□□□ -0.32
SDHAF3-203ENST00000479853 SPDYE4A6NLX3 237 aa13.02□□□□□ -0.33
SDHAF3-203ENST00000479853 CREBZFQ9NS37 354 aa12.99□□□□□ -0.33
SDHAF3-203ENST00000479853 STAG3Q9UJ98 1225 aa12.99□□□□□ -0.33
SDHAF3-203ENST00000479853 CD44P16070 742 aaKnown RBP12.97□□□□□ -0.33
SDHAF3-203ENST00000479853 CLCN6P51797 869 aa12.9□□□□□ -0.34
SDHAF3-203ENST00000479853 POTEIP0CG38 1075 aa12.88□□□□□ -0.35
SDHAF3-203ENST00000479853 PROM2Q8N271 834 aa12.86□□□□□ -0.35
SDHAF3-203ENST00000479853 ZNF579Q8NAF0 562 aaKnown RBP12.85□□□□□ -0.35
SDHAF3-203ENST00000479853 MNX1P50219 401 aaPredicted RBP12.82□□□□□ -0.36
SDHAF3-203ENST00000479853 LHX8Q68G74 356 aa12.77□□□□□ -0.37
SDHAF3-203ENST00000479853 ZRANB1Q9UGI0 708 aa12.77□□□□□ -0.37
SDHAF3-203ENST00000479853 GALR2O43603 387 aaPredicted RBP12.66□□□□□ -0.38
SDHAF3-203ENST00000479853 NPM1P06748 294 aaKnown RBP eCLIP12.65□□□□□ -0.38
SDHAF3-203ENST00000479853 DCBLD2Q96PD2 775 aa12.63□□□□□ -0.39
SDHAF3-203ENST00000479853 PHF12Q96QT6 1004 aa12.6□□□□□ -0.39
SDHAF3-203ENST00000479853 PAK3O75914 559 aaPredicted RBP12.59□□□□□ -0.39
SDHAF3-203ENST00000479853 CCDC61Q9Y6R9 512 aa12.47□□□□□ -0.41
SDHAF3-203ENST00000479853 PELP1Q8IZL8 1130 aaKnown RBP12.46□□□□□ -0.41
SDHAF3-203ENST00000479853 MS4A3Q96HJ5 214 aa12.46□□□□□ -0.41
SDHAF3-203ENST00000479853 POTEB2H3BUK9 544 aa12.45□□□□□ -0.42
SDHAF3-203ENST00000479853 ASTLQ6HA08 431 aaPredicted RBP12.45□□□□□ -0.42
SDHAF3-203ENST00000479853 TSPYL2Q9H2G4 693 aaPredicted RBP12.4□□□□□ -0.42
SDHAF3-203ENST00000479853 ATMINO43313 823 aaPredicted RBP12.39□□□□□ -0.43
Retrieved 100 of 20,778 RNA–protein pairs in 37.5 ms