RNA–Protein interactions for RNA: ENST00000358768.6

PARD3B-203, Transcript of par-3 family cell polarity regulator beta, humanhuman

TSL 1 (best) BASIC

Gene PARD3B, Length 3,432 nt, Biotype protein coding, Subcellular localisation Cytoplasm, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
PARD3B-203ENST00000358768 NISCHQ9Y2I1 1504 aa23.51■■□□□ 1.35
PARD3B-203ENST00000358768 CCDC180Q9P1Z9 1646 aa20.25■□□□□ 0.83
PARD3B-203ENST00000358768 ZCCHC6Q5VYS8 1495 aaKnown RBP19.9■□□□□ 0.78
PARD3B-203ENST00000358768 SHROOM4Q9ULL8 1493 aa19.52■□□□□ 0.72
PARD3B-203ENST00000358768 DCAF1Q9Y4B6 1507 aa19.44■□□□□ 0.7
PARD3B-203ENST00000358768 SUPT5HO00267 1087 aaKnown RBP18.99■□□□□ 0.63
PARD3B-203ENST00000358768 DCAF8L2P0C7V8 631 aa18.97■□□□□ 0.63
PARD3B-203ENST00000358768 MYO15BQ96JP2 1530 aa18.96■□□□□ 0.63
PARD3B-203ENST00000358768 ABCC9O60706 1549 aa18.76■□□□□ 0.59
PARD3B-203ENST00000358768 SCRIBQ14160 1630 aa18.7■□□□□ 0.58
PARD3B-203ENST00000358768 NACADO15069 1562 aa18.64■□□□□ 0.57
PARD3B-203ENST00000358768 CHIC1Q5VXU3 224 aa18.59■□□□□ 0.57
PARD3B-203ENST00000358768 RSF1Q96T23 1441 aaPredicted RBP18.47■□□□□ 0.55
PARD3B-203ENST00000358768 RB1CC1Q8TDY2 1594 aa18.32■□□□□ 0.52
PARD3B-203ENST00000358768 UNC13AQ9UPW8 1703 aa18.28■□□□□ 0.52
PARD3B-203ENST00000358768 CECR2Q9BXF3 1484 aa18.27■□□□□ 0.52
PARD3B-203ENST00000358768 MROH2BQ7Z745 1585 aa18.24■□□□□ 0.51
PARD3B-203ENST00000358768 WIZO95785 1651 aa18.17■□□□□ 0.5
PARD3B-203ENST00000358768 BAZ1AQ9NRL2 1556 aaPredicted RBP18.09■□□□□ 0.49
PARD3B-203ENST00000358768 EIF4G1Q04637 1599 aaKnown RBP18.04■□□□□ 0.48
PARD3B-203ENST00000358768 SMARCA4P51532 1647 aa17.99■□□□□ 0.47
PARD3B-203ENST00000358768 BICRAQ9NZM4 1560 aa17.96■□□□□ 0.47
PARD3B-203ENST00000358768 LOC105371045A0A1W2PR82 267 aa17.92■□□□□ 0.46
PARD3B-203ENST00000358768 TOP2AP11388 1531 aaKnown RBP17.89■□□□□ 0.45
PARD3B-203ENST00000358768 SMARCA2P51531 1590 aa17.81■□□□□ 0.44
PARD3B-203ENST00000358768 PEG3Q9GZU2 1588 aa17.76■□□□□ 0.43
PARD3B-203ENST00000358768 TRIM41Q8WV44 630 aa17.76■□□□□ 0.43
PARD3B-203ENST00000358768 CCDC88BA6NC98 1476 aa17.73■□□□□ 0.43
PARD3B-203ENST00000358768 HRCP23327 699 aa17.65■□□□□ 0.42
PARD3B-203ENST00000358768 PCGF6Q9BYE7 350 aa17.63■□□□□ 0.41
PARD3B-203ENST00000358768 ABCC8Q09428 1581 aa17.6■□□□□ 0.41
PARD3B-203ENST00000358768 PABPN1Q86U42 306 aaKnown RBP eCLIP17.57■□□□□ 0.4
PARD3B-203ENST00000358768 FAM9AQ8IZU1 332 aaPredicted RBP17.49■□□□□ 0.39
PARD3B-203ENST00000358768 ATAD2BQ9ULI0 1458 aa17.49■□□□□ 0.39
PARD3B-203ENST00000358768 PPARGC1BQ86YN6 1023 aaKnown RBP17.47■□□□□ 0.39
PARD3B-203ENST00000358768 TRIM26Q12899 539 aaPredicted RBP17.45■□□□□ 0.38
PARD3B-203ENST00000358768 BAZ1BQ9UIG0 1483 aaKnown RBP17.35■□□□□ 0.37
PARD3B-203ENST00000358768 SOGA1O94964 1423 aa17.35■□□□□ 0.37
PARD3B-203ENST00000358768 SYNJ1O43426 1573 aa17.35■□□□□ 0.37
PARD3B-203ENST00000358768 RUSC2Q8N2Y8 1516 aa17.32■□□□□ 0.36
PARD3B-203ENST00000358768 WRNQ14191 1432 aaPredicted RBP eCLIP17.27■□□□□ 0.36
PARD3B-203ENST00000358768 EEA1Q15075 1411 aa17.27■□□□□ 0.36
PARD3B-203ENST00000358768 HMGXB3Q12766 1538 aa17.26■□□□□ 0.35
PARD3B-203ENST00000358768 EHMT2Q96KQ7 1210 aa17.23■□□□□ 0.35
PARD3B-203ENST00000358768 NCAPD3P42695 1498 aa17.21■□□□□ 0.35
PARD3B-203ENST00000358768 BIVM-ERCC5R4GMW8 1640 aa17.2■□□□□ 0.34
PARD3B-203ENST00000358768 TNIKQ9UKE5 1360 aa17.19■□□□□ 0.34
PARD3B-203ENST00000358768 KIF21BO75037 1637 aa17.18■□□□□ 0.34
PARD3B-203ENST00000358768 TOP2BQ02880 1626 aa17.18■□□□□ 0.34
PARD3B-203ENST00000358768 CEP162Q5TB80 1403 aa17.16■□□□□ 0.34
PARD3B-203ENST00000358768 CSRNP3Q8WYN3 585 aa17.13■□□□□ 0.33
PARD3B-203ENST00000358768 GOLGA3Q08378 1498 aa17.11■□□□□ 0.33
PARD3B-203ENST00000358768 PRDM2Q13029 1718 aa17.11■□□□□ 0.33
PARD3B-203ENST00000358768 CEP164Q9UPV0 1460 aa17.05■□□□□ 0.32
PARD3B-203ENST00000358768 CFTRP13569 1480 aa17.02■□□□□ 0.31
PARD3B-203ENST00000358768 CUX1P39880 1505 aa17.01■□□□□ 0.31
PARD3B-203ENST00000358768 RAPGEF2Q9Y4G8 1499 aa16.96■□□□□ 0.31
PARD3B-203ENST00000358768 PELP1Q8IZL8 1130 aaKnown RBP16.95■□□□□ 0.3
PARD3B-203ENST00000358768 ZEB1P37275 1124 aaPredicted RBP16.94■□□□□ 0.3
PARD3B-203ENST00000358768 ERICH3Q5RHP9 1530 aa16.92■□□□□ 0.3
PARD3B-203ENST00000358768 PRXQ9BXM0 1461 aa16.91■□□□□ 0.3
PARD3B-203ENST00000358768 CC2D2AQ9P2K1 1620 aa16.87■□□□□ 0.29
PARD3B-203ENST00000358768 UBTFP17480 764 aaKnown RBP16.87■□□□□ 0.29
PARD3B-203ENST00000358768 CLIP1P30622 1438 aa16.85■□□□□ 0.29
PARD3B-203ENST00000358768 VPS8Q8N3P4 1428 aa16.82■□□□□ 0.28
PARD3B-203ENST00000358768 CADPSQ9ULU8 1353 aa16.76■□□□□ 0.27
PARD3B-203ENST00000358768 ARAP1Q96P48 1450 aa16.75■□□□□ 0.27
PARD3B-203ENST00000358768 KIF27Q86VH2 1401 aa16.73■□□□□ 0.27
PARD3B-203ENST00000358768 SCAF1Q9H7N4 1312 aaKnown RBP16.72■□□□□ 0.27
PARD3B-203ENST00000358768 HNRNPUL2-BSCL2H3BQZ7 746 aaPredicted RBP16.71■□□□□ 0.27
PARD3B-203ENST00000358768 FGD5Q6ZNL6 1462 aa16.66■□□□□ 0.26
PARD3B-203ENST00000358768 TTBK1Q5TCY1 1321 aaPredicted RBP16.65■□□□□ 0.26
PARD3B-203ENST00000358768 IGF1RP08069 1367 aa16.62■□□□□ 0.25
PARD3B-203ENST00000358768 ARHGAP35Q9NRY4 1499 aa16.61■□□□□ 0.25
PARD3B-203ENST00000358768 FANCD2Q9BXW9 1451 aa16.61■□□□□ 0.25
PARD3B-203ENST00000358768 DNMBPQ6XZF7 1577 aa16.61■□□□□ 0.25
PARD3B-203ENST00000358768 CUX2O14529 1486 aa16.6■□□□□ 0.25
PARD3B-203ENST00000358768 CCER1Q8TC90 406 aaPredicted RBP16.59■□□□□ 0.25
PARD3B-203ENST00000358768 WDR97A6NE52 1622 aa16.59■□□□□ 0.25
PARD3B-203ENST00000358768 NESP48681 1621 aa16.56■□□□□ 0.24
PARD3B-203ENST00000358768 TOPBP1Q92547 1522 aa16.54■□□□□ 0.24
PARD3B-203ENST00000358768 LAMC3Q9Y6N6 1575 aa16.53■□□□□ 0.24
PARD3B-203ENST00000358768 ABCA10Q8WWZ4 1543 aa16.53■□□□□ 0.24
PARD3B-203ENST00000358768 POLA1P09884 1462 aaPredicted RBP16.51■□□□□ 0.23
PARD3B-203ENST00000358768 CARMIL1Q5VZK9 1371 aa16.48■□□□□ 0.23
PARD3B-203ENST00000358768 RAD54L2Q9Y4B4 1467 aa16.47■□□□□ 0.23
PARD3B-203ENST00000358768 RRBP1Q9P2E9 1410 aaKnown RBP16.47■□□□□ 0.23
PARD3B-203ENST00000358768 KANK4Q5T7N3 995 aaPredicted RBP16.47■□□□□ 0.23
PARD3B-203ENST00000358768 MAP3K1Q13233 1512 aa16.46■□□□□ 0.23
PARD3B-203ENST00000358768 RANGAP1P46060 587 aaPredicted RBP16.46■□□□□ 0.23
PARD3B-203ENST00000358768 URB2Q14146 1524 aaKnown RBP16.46■□□□□ 0.23
PARD3B-203ENST00000358768 CUL7Q14999 1698 aa16.46■□□□□ 0.23
PARD3B-203ENST00000358768 CTTNBP2Q8WZ74 1663 aa16.45■□□□□ 0.22
PARD3B-203ENST00000358768 ABCA5Q8WWZ7 1642 aa16.44■□□□□ 0.22
PARD3B-203ENST00000358768 TIAM1Q13009 1591 aa16.43■□□□□ 0.22
PARD3B-203ENST00000358768 CFAP43Q8NDM7 1665 aa16.43■□□□□ 0.22
PARD3B-203ENST00000358768 KIF21AQ7Z4S6 1674 aa16.43■□□□□ 0.22
PARD3B-203ENST00000358768 HNRNPUL2Q1KMD3 747 aaKnown RBP16.39■□□□□ 0.21
PARD3B-203ENST00000358768 APLP2Q06481 763 aa16.38■□□□□ 0.21
PARD3B-203ENST00000358768 PCF11O94913 1555 aaKnown RBP16.37■□□□□ 0.21
Retrieved 100 of 20,778 RNA–protein pairs in 118.6 ms