RNA–Protein interactions for RNA: ENST00000446015.6

AP1S3-208, Transcript of adaptor related protein complex 1 subunit sigma 3, humanhuman

APPRIS ALT1 TSL 1 (best) BASIC

Gene AP1S3, Length 499 nt, Biotype protein coding, Subcellular localisation Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
AP1S3-208ENST00000446015 AEBP2Q6ZN18 517 aaPredicted RBP20.34■□□□□ 0.85
AP1S3-208ENST00000446015 CHIC1Q5VXU3 224 aa19.96■□□□□ 0.79
AP1S3-208ENST00000446015 SENP3Q9H4L4 574 aaPredicted RBP17.51■□□□□ 0.39
AP1S3-208ENST00000446015 PHF23Q9BUL5 403 aaPredicted RBP17.41■□□□□ 0.38
AP1S3-208ENST00000446015 PLPPR3Q6T4P5 718 aa16.27■□□□□ 0.2
AP1S3-208ENST00000446015 FOXD1Q16676 465 aa16.09■□□□□ 0.17
AP1S3-208ENST00000446015 ADRA2BP18089 450 aa15.36■□□□□ 0.05
AP1S3-208ENST00000446015 PPP6R1Q9UPN7 881 aa15.34■□□□□ 0.05
AP1S3-208ENST00000446015 PIAS4Q8N2W9 510 aaPredicted RBP15.24■□□□□ 0.03
AP1S3-208ENST00000446015 MSH5O43196 834 aa15.06■□□□□ 0
AP1S3-208ENST00000446015 SCAF1Q9H7N4 1312 aaKnown RBP14.33□□□□□ -0.12
AP1S3-208ENST00000446015 PPP4R3CPQ6ZMV5 832 aa14.23□□□□□ -0.13
AP1S3-208ENST00000446015 NCBP3Q53F19 620 aaKnown RBP14□□□□□ -0.17
AP1S3-208ENST00000446015 CNKSR2Q8WXI2 1034 aa13.93□□□□□ -0.18
AP1S3-208ENST00000446015 DMRT2Q9Y5R5 561 aa13.91□□□□□ -0.18
AP1S3-208ENST00000446015 MAPK8IP2Q13387 824 aaPredicted RBP13.89□□□□□ -0.19
AP1S3-208ENST00000446015 POTEDQ86YR6 584 aa13.84□□□□□ -0.19
AP1S3-208ENST00000446015 KCNA4P22459 653 aa13.76□□□□□ -0.21
AP1S3-208ENST00000446015 RNF216Q9NWF9 866 aaPredicted RBP13.68□□□□□ -0.22
AP1S3-208ENST00000446015 NPM3O75607 178 aaKnown RBP13.62□□□□□ -0.23
AP1S3-208ENST00000446015 HOXD11P31277 338 aaPredicted RBP13.61□□□□□ -0.23
AP1S3-208ENST00000446015 DNAJC5BQ9UF47 199 aa13.41□□□□□ -0.26
AP1S3-208ENST00000446015 DCAF8L1A6NGE4 600 aa13.26□□□□□ -0.29
AP1S3-208ENST00000446015 SLC4A1APQ9BWU0 796 aaKnown RBP13.19□□□□□ -0.3
AP1S3-208ENST00000446015 GRWD1Q9BQ67 446 aaKnown RBP eCLIP12.96□□□□□ -0.33
AP1S3-208ENST00000446015 SLC4A2P04920 1241 aa12.82□□□□□ -0.36
AP1S3-208ENST00000446015 FOXD4L1Q9NU39 408 aa12.82□□□□□ -0.36
AP1S3-208ENST00000446015 RNF39Q9H2S5 420 aa12.79□□□□□ -0.36
AP1S3-208ENST00000446015 HNRNPUL2-BSCL2H3BQZ7 746 aaPredicted RBP12.74□□□□□ -0.37
AP1S3-208ENST00000446015 HNRNPUL2Q1KMD3 747 aaKnown RBP12.74□□□□□ -0.37
AP1S3-208ENST00000446015 C1QBPQ07021 282 aaKnown RBP12.73□□□□□ -0.37
AP1S3-208ENST00000446015 MYCNP04198 464 aaPredicted RBP12.71□□□□□ -0.37
AP1S3-208ENST00000446015 APLP2Q06481 763 aa12.68□□□□□ -0.38
AP1S3-208ENST00000446015 U3KPZ7 1027 aaPredicted RBP12.68□□□□□ -0.38
AP1S3-208ENST00000446015 EHMT2Q96KQ7 1210 aa12.64□□□□□ -0.39
AP1S3-208ENST00000446015 SAMD1Q6SPF0 538 aaPredicted RBP12.62□□□□□ -0.39
AP1S3-208ENST00000446015 ZBTB22O15209 634 aa12.59□□□□□ -0.39
AP1S3-208ENST00000446015 CSRNP3Q8WYN3 585 aa12.53□□□□□ -0.4
AP1S3-208ENST00000446015 CACNB1Q02641 598 aaPredicted RBP12.51□□□□□ -0.41
AP1S3-208ENST00000446015 ATXN8OSP0DMR3 200 aa12.46□□□□□ -0.41
AP1S3-208ENST00000446015 ZNF219Q9P2Y4 722 aaPredicted RBP12.39□□□□□ -0.43
AP1S3-208ENST00000446015 CAPN15O75808 1086 aa12.34□□□□□ -0.43
AP1S3-208ENST00000446015 SPINK5Q9NQ38 1064 aaPredicted RBP12.28□□□□□ -0.44
AP1S3-208ENST00000446015 TRHP20396 242 aaPredicted RBP12.23□□□□□ -0.45
AP1S3-208ENST00000446015 DSG3P32926 999 aa12.13□□□□□ -0.47
AP1S3-208ENST00000446015 ATF5Q9Y2D1 282 aaPredicted RBP12.13□□□□□ -0.47
AP1S3-208ENST00000446015 ZBTB12Q9Y330 459 aaPredicted RBP12.04□□□□□ -0.48
AP1S3-208ENST00000446015 POLA2Q14181 598 aa12.02□□□□□ -0.49
AP1S3-208ENST00000446015 ABCB7O75027 752 aa12.01□□□□□ -0.49
AP1S3-208ENST00000446015 FBLN2P98095 1184 aa11.89□□□□□ -0.51
AP1S3-208ENST00000446015 RBM42Q9BTD8 480 aaKnown RBP11.74□□□□□ -0.53
AP1S3-208ENST00000446015 MKRN4PQ13434 485 aaPredicted RBP11.65□□□□□ -0.54
AP1S3-208ENST00000446015 SPDYE2BA6NHP3 402 aa11.62□□□□□ -0.55
AP1S3-208ENST00000446015 SPDYE6P0CI01 402 aa11.62□□□□□ -0.55
AP1S3-208ENST00000446015 SPDYE2Q495Y8 402 aa11.62□□□□□ -0.55
AP1S3-208ENST00000446015 OSCARQ8IYS5 282 aa11.61□□□□□ -0.55
AP1S3-208ENST00000446015 AKT1S1Q96B36 256 aa11.5□□□□□ -0.57
AP1S3-208ENST00000446015 ZNF692Q9BU19 519 aaPredicted RBP11.49□□□□□ -0.57
AP1S3-208ENST00000446015 SPDYE4A6NLX3 237 aa11.48□□□□□ -0.57
AP1S3-208ENST00000446015 SSUH2Q9Y2M2 353 aa11.46□□□□□ -0.57
AP1S3-208ENST00000446015 FKBP8Q14318 412 aa11.38□□□□□ -0.59
AP1S3-208ENST00000446015 PABPN1Q86U42 306 aaKnown RBP eCLIP11.31□□□□□ -0.6
AP1S3-208ENST00000446015 REM2Q8IYK8 340 aaPredicted RBP11.3□□□□□ -0.6
AP1S3-208ENST00000446015 SPDYE1Q8NFV5 336 aaPredicted RBP11.3□□□□□ -0.6
AP1S3-208ENST00000446015 PROM2Q8N271 834 aa11.29□□□□□ -0.6
AP1S3-208ENST00000446015 STAG3Q9UJ98 1225 aa11.27□□□□□ -0.61
AP1S3-208ENST00000446015 FBXO3Q9UK99 471 aa11.18□□□□□ -0.62
AP1S3-208ENST00000446015 PITPNM1O00562 1244 aa11.16□□□□□ -0.62
AP1S3-208ENST00000446015 CHRDL2Q6WN34 429 aa11.14□□□□□ -0.63
AP1S3-208ENST00000446015 CLEC11AQ9Y240 323 aa11.14□□□□□ -0.63
AP1S3-208ENST00000446015 PRR29P0C7W0 189 aa11.08□□□□□ -0.64
AP1S3-208ENST00000446015 PLEKHG5O94827 1062 aa11.02□□□□□ -0.65
AP1S3-208ENST00000446015 FXR2P51116 673 aaKnown RBP eCLIP10.99□□□□□ -0.65
AP1S3-208ENST00000446015 PIP4P2Q8N4L2 257 aa10.94□□□□□ -0.66
AP1S3-208ENST00000446015 ZBTB47Q9UFB7 747 aaPredicted RBP10.94□□□□□ -0.66
AP1S3-208ENST00000446015 POTEHQ6S545 545 aa10.91□□□□□ -0.66
AP1S3-208ENST00000446015 PRKAR2AP13861 404 aaKnown RBP10.9□□□□□ -0.66
AP1S3-208ENST00000446015 VASPP50552 380 aaPredicted RBP10.9□□□□□ -0.66
AP1S3-208ENST00000446015 MIER1Q8N108 512 aa10.89□□□□□ -0.67
AP1S3-208ENST00000446015 PLCD3Q8N3E9 789 aa10.89□□□□□ -0.67
AP1S3-208ENST00000446015 CREBZFQ9NS37 354 aa10.86□□□□□ -0.67
AP1S3-208ENST00000446015 NPM1P06748 294 aaKnown RBP eCLIP10.84□□□□□ -0.67
AP1S3-208ENST00000446015 CHADLQ6NUI6 762 aa10.79□□□□□ -0.68
AP1S3-208ENST00000446015 FARP1Q9Y4F1 1045 aaPredicted RBP10.79□□□□□ -0.68
AP1S3-208ENST00000446015 KLHL34Q8N239 644 aa10.73□□□□□ -0.69
AP1S3-208ENST00000446015 MNX1P50219 401 aaPredicted RBP10.72□□□□□ -0.69
AP1S3-208ENST00000446015 PAK3O75914 559 aaPredicted RBP10.69□□□□□ -0.7
AP1S3-208ENST00000446015 IFNLR1Q8IU57 520 aaPredicted RBP10.66□□□□□ -0.7
AP1S3-208ENST00000446015 SPOCK2Q92563 424 aa10.66□□□□□ -0.7
AP1S3-208ENST00000446015 C19orf67A6NJJ6 358 aa10.62□□□□□ -0.71
AP1S3-208ENST00000446015 HAX1O00165 279 aa10.62□□□□□ -0.71
AP1S3-208ENST00000446015 FAM212AQ96EL1 285 aa10.62□□□□□ -0.71
AP1S3-208ENST00000446015 CD44P16070 742 aaKnown RBP10.6□□□□□ -0.71
AP1S3-208ENST00000446015 CLCN6P51797 869 aa10.58□□□□□ -0.72
AP1S3-208ENST00000446015 NUBP1P53384 320 aa10.58□□□□□ -0.72
AP1S3-208ENST00000446015 GSE1Q14687 1217 aa10.58□□□□□ -0.72
AP1S3-208ENST00000446015 TRIM41Q8WV44 630 aa10.53□□□□□ -0.72
AP1S3-208ENST00000446015 RASEFQ8IZ41 740 aa10.52□□□□□ -0.73
AP1S3-208ENST00000446015 ZRANB1Q9UGI0 708 aa10.52□□□□□ -0.73
AP1S3-208ENST00000446015 ZNF579Q8NAF0 562 aaKnown RBP10.51□□□□□ -0.73
Retrieved 100 of 20,778 RNA–protein pairs in 13.9 ms