RNA–Protein interactions for RNA: ENST00000349953.7

PARD3B-201, Transcript of par-3 family cell polarity regulator beta, humanhuman

APPRIS ALT2 TSL 1 (best) BASIC

Gene PARD3B, Length 3,315 nt, Biotype protein coding, Subcellular localisation Cytoplasm, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
PARD3B-201ENST00000349953 NISCHQ9Y2I1 1504 aa24.56■■□□□ 1.52
PARD3B-201ENST00000349953 SHROOM4Q9ULL8 1493 aa21.21■□□□□ 0.99
PARD3B-201ENST00000349953 DCAF8L2P0C7V8 631 aa20.86■□□□□ 0.93
PARD3B-201ENST00000349953 CCDC180Q9P1Z9 1646 aa20.78■□□□□ 0.92
PARD3B-201ENST00000349953 ZCCHC6Q5VYS8 1495 aaKnown RBP20.71■□□□□ 0.91
PARD3B-201ENST00000349953 SUPT5HO00267 1087 aaKnown RBP20.66■□□□□ 0.9
PARD3B-201ENST00000349953 DCAF1Q9Y4B6 1507 aa19.93■□□□□ 0.78
PARD3B-201ENST00000349953 ABCC9O60706 1549 aa19.84■□□□□ 0.77
PARD3B-201ENST00000349953 CHIC1Q5VXU3 224 aa19.82■□□□□ 0.76
PARD3B-201ENST00000349953 SCRIBQ14160 1630 aa19.78■□□□□ 0.76
PARD3B-201ENST00000349953 MYO15BQ96JP2 1530 aa19.78■□□□□ 0.76
PARD3B-201ENST00000349953 RSF1Q96T23 1441 aaPredicted RBP19.44■□□□□ 0.7
PARD3B-201ENST00000349953 LOC105371045A0A1W2PR82 267 aa19.41■□□□□ 0.7
PARD3B-201ENST00000349953 CECR2Q9BXF3 1484 aa19.36■□□□□ 0.69
PARD3B-201ENST00000349953 NACADO15069 1562 aa19.32■□□□□ 0.68
PARD3B-201ENST00000349953 RB1CC1Q8TDY2 1594 aa19.26■□□□□ 0.67
PARD3B-201ENST00000349953 EHMT2Q96KQ7 1210 aa19.2■□□□□ 0.66
PARD3B-201ENST00000349953 MROH2BQ7Z745 1585 aa19.2■□□□□ 0.66
PARD3B-201ENST00000349953 FAM9AQ8IZU1 332 aaPredicted RBP19.18■□□□□ 0.66
PARD3B-201ENST00000349953 PCGF6Q9BYE7 350 aa19.13■□□□□ 0.65
PARD3B-201ENST00000349953 TRIM41Q8WV44 630 aa19.1■□□□□ 0.65
PARD3B-201ENST00000349953 WIZO95785 1651 aa19.1■□□□□ 0.65
PARD3B-201ENST00000349953 PABPN1Q86U42 306 aaKnown RBP eCLIP19.06■□□□□ 0.64
PARD3B-201ENST00000349953 UNC13AQ9UPW8 1703 aa18.89■□□□□ 0.62
PARD3B-201ENST00000349953 BAZ1AQ9NRL2 1556 aaPredicted RBP18.83■□□□□ 0.6
PARD3B-201ENST00000349953 HRCP23327 699 aa18.8■□□□□ 0.6
PARD3B-201ENST00000349953 PPARGC1BQ86YN6 1023 aaKnown RBP18.76■□□□□ 0.59
PARD3B-201ENST00000349953 SMARCA4P51532 1647 aa18.74■□□□□ 0.59
PARD3B-201ENST00000349953 BICRAQ9NZM4 1560 aa18.69■□□□□ 0.58
PARD3B-201ENST00000349953 CCDC88BA6NC98 1476 aa18.68■□□□□ 0.58
PARD3B-201ENST00000349953 ABCC8Q09428 1581 aa18.68■□□□□ 0.58
PARD3B-201ENST00000349953 TOP2AP11388 1531 aaKnown RBP18.64■□□□□ 0.57
PARD3B-201ENST00000349953 EIF4G1Q04637 1599 aaKnown RBP18.6■□□□□ 0.57
PARD3B-201ENST00000349953 SMARCA2P51531 1590 aa18.6■□□□□ 0.57
PARD3B-201ENST00000349953 TRIM26Q12899 539 aaPredicted RBP18.59■□□□□ 0.57
PARD3B-201ENST00000349953 TTBK1Q5TCY1 1321 aaPredicted RBP18.48■□□□□ 0.55
PARD3B-201ENST00000349953 SOGA1O94964 1423 aa18.46■□□□□ 0.55
PARD3B-201ENST00000349953 RUSC2Q8N2Y8 1516 aa18.43■□□□□ 0.54
PARD3B-201ENST00000349953 ATAD2BQ9ULI0 1458 aa18.36■□□□□ 0.53
PARD3B-201ENST00000349953 BAZ1BQ9UIG0 1483 aaKnown RBP18.3■□□□□ 0.52
PARD3B-201ENST00000349953 UBTFP17480 764 aaKnown RBP18.27■□□□□ 0.52
PARD3B-201ENST00000349953 PEG3Q9GZU2 1588 aa18.26■□□□□ 0.51
PARD3B-201ENST00000349953 WRNQ14191 1432 aaPredicted RBP eCLIP18.26■□□□□ 0.51
PARD3B-201ENST00000349953 CSRNP3Q8WYN3 585 aa18.25■□□□□ 0.51
PARD3B-201ENST00000349953 RANGAP1P46060 587 aaPredicted RBP18.23■□□□□ 0.51
PARD3B-201ENST00000349953 SYNJ1O43426 1573 aa18.21■□□□□ 0.51
PARD3B-201ENST00000349953 CEP162Q5TB80 1403 aa18.18■□□□□ 0.5
PARD3B-201ENST00000349953 HNRNPUL2-BSCL2H3BQZ7 746 aaPredicted RBP18.13■□□□□ 0.49
PARD3B-201ENST00000349953 TNIKQ9UKE5 1360 aa18.07■□□□□ 0.48
PARD3B-201ENST00000349953 GOLGA3Q08378 1498 aa18.01■□□□□ 0.47
PARD3B-201ENST00000349953 EEA1Q15075 1411 aa18■□□□□ 0.47
PARD3B-201ENST00000349953 RAPGEF2Q9Y4G8 1499 aa17.97■□□□□ 0.47
PARD3B-201ENST00000349953 CCER1Q8TC90 406 aaPredicted RBP17.95■□□□□ 0.46
PARD3B-201ENST00000349953 NCAPD3P42695 1498 aa17.95■□□□□ 0.46
PARD3B-201ENST00000349953 ZEB1P37275 1124 aaPredicted RBP17.91■□□□□ 0.46
PARD3B-201ENST00000349953 CEP164Q9UPV0 1460 aa17.91■□□□□ 0.46
PARD3B-201ENST00000349953 CLIP1P30622 1438 aa17.88■□□□□ 0.45
PARD3B-201ENST00000349953 TOP2BQ02880 1626 aa17.87■□□□□ 0.45
PARD3B-201ENST00000349953 HMGXB3Q12766 1538 aa17.87■□□□□ 0.45
PARD3B-201ENST00000349953 CUX1P39880 1505 aa17.86■□□□□ 0.45
PARD3B-201ENST00000349953 HNRNPUL2Q1KMD3 747 aaKnown RBP17.83■□□□□ 0.44
PARD3B-201ENST00000349953 KIF21BO75037 1637 aa17.82■□□□□ 0.44
PARD3B-201ENST00000349953 CFTRP13569 1480 aa17.79■□□□□ 0.44
PARD3B-201ENST00000349953 BIVM-ERCC5R4GMW8 1640 aa17.77■□□□□ 0.43
PARD3B-201ENST00000349953 CC2D2AQ9P2K1 1620 aa17.72■□□□□ 0.43
PARD3B-201ENST00000349953 VPS8Q8N3P4 1428 aa17.71■□□□□ 0.43
PARD3B-201ENST00000349953 DNAJC5BQ9UF47 199 aa17.71■□□□□ 0.43
PARD3B-201ENST00000349953 APLP2Q06481 763 aa17.7■□□□□ 0.42
PARD3B-201ENST00000349953 PRXQ9BXM0 1461 aa17.68■□□□□ 0.42
PARD3B-201ENST00000349953 CADPSQ9ULU8 1353 aa17.68■□□□□ 0.42
PARD3B-201ENST00000349953 KIF27Q86VH2 1401 aa17.66■□□□□ 0.42
PARD3B-201ENST00000349953 KANK4Q5T7N3 995 aaPredicted RBP17.65■□□□□ 0.42
PARD3B-201ENST00000349953 CUX2O14529 1486 aa17.64■□□□□ 0.41
PARD3B-201ENST00000349953 NESP48681 1621 aa17.64■□□□□ 0.41
PARD3B-201ENST00000349953 ARAP1Q96P48 1450 aa17.61■□□□□ 0.41
PARD3B-201ENST00000349953 FGD5Q6ZNL6 1462 aa17.59■□□□□ 0.41
PARD3B-201ENST00000349953 P3H3Q8IVL6 736 aa17.57■□□□□ 0.4
PARD3B-201ENST00000349953 IGF1RP08069 1367 aa17.56■□□□□ 0.4
PARD3B-201ENST00000349953 ERICH3Q5RHP9 1530 aa17.55■□□□□ 0.4
PARD3B-201ENST00000349953 RAD54L2Q9Y4B4 1467 aa17.54■□□□□ 0.4
PARD3B-201ENST00000349953 FANCD2Q9BXW9 1451 aa17.53■□□□□ 0.4
PARD3B-201ENST00000349953 ITGAEP38570 1179 aa17.52■□□□□ 0.39
PARD3B-201ENST00000349953 ARHGAP35Q9NRY4 1499 aa17.5■□□□□ 0.39
PARD3B-201ENST00000349953 CARMIL1Q5VZK9 1371 aa17.48■□□□□ 0.39
PARD3B-201ENST00000349953 ATP1B4Q9UN42 357 aaPredicted RBP17.47■□□□□ 0.39
PARD3B-201ENST00000349953 PRDM2Q13029 1718 aa17.46■□□□□ 0.39
PARD3B-201ENST00000349953 DIEXFQ68CQ4 756 aaKnown RBP17.44■□□□□ 0.38
PARD3B-201ENST00000349953 POLA1P09884 1462 aaPredicted RBP17.4■□□□□ 0.38
PARD3B-201ENST00000349953 TOPBP1Q92547 1522 aa17.38■□□□□ 0.37
PARD3B-201ENST00000349953 TDRD9Q8NDG6 1382 aaKnown RBP17.36■□□□□ 0.37
PARD3B-201ENST00000349953 PELP1Q8IZL8 1130 aaKnown RBP17.35■□□□□ 0.37
PARD3B-201ENST00000349953 URB2Q14146 1524 aaKnown RBP17.32■□□□□ 0.36
PARD3B-201ENST00000349953 FHOD3Q2V2M9 1422 aa17.32■□□□□ 0.36
PARD3B-201ENST00000349953 DNMBPQ6XZF7 1577 aa17.32■□□□□ 0.36
PARD3B-201ENST00000349953 ZNF316A6NFI3 1004 aaPredicted RBP17.31■□□□□ 0.36
PARD3B-201ENST00000349953 SCAF1Q9H7N4 1312 aaKnown RBP17.31■□□□□ 0.36
PARD3B-201ENST00000349953 ABCA10Q8WWZ4 1543 aa17.26■□□□□ 0.35
PARD3B-201ENST00000349953 DHX57Q6P158 1386 aaKnown RBP17.26■□□□□ 0.35
PARD3B-201ENST00000349953 CCNB3Q8WWL7 1395 aa17.26■□□□□ 0.35
PARD3B-201ENST00000349953 FAM50AQ14320 339 aaKnown RBP17.24■□□□□ 0.35
Retrieved 100 of 20,778 RNA–protein pairs in 7.4 ms