Protein–RNA interactions for Protein: Q07988

YLR040C, Cell wall protein YLR040C, yeastyeast

Predictions only

Length 224 aa.

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Protein RNA Prediction (catRAPID) Interaction (RIP-Chip)
Gene UniProt Accession Gene Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score Detected Interaction
YLR040CQ07988 YER023C-AYER023C-A 213 nt3.35□□□□□ -1.87
YLR040CQ07988 ERG28YER044C 447 nt3.35□□□□□ -1.87
YLR040CQ07988 HMF1YER057C 390 nt3.35□□□□□ -1.87
YLR040CQ07988 YER091C-AYER091C-A 222 nt3.35□□□□□ -1.87
YLR040CQ07988 AST2YER101C 1293 nt3.35□□□□□ -1.87
YLR040CQ07988 YBL008W-AYBL008W-A 240 nt3.35□□□□□ -1.87
YLR040CQ07988 PFY1YOR122C 381 nt3.35□□□□□ -1.87
YLR040CQ07988 snR51snR51 107 nt3.35□□□□□ -1.87
YLR040CQ07988 HEF3YNL014W 3135 nt3.35□□□□□ -1.87
YLR040CQ07988 NDD1YOR372C 1665 nt3.35□□□□□ -1.87
YLR040CQ07988 GPI1YGR216C 1830 nt3.35□□□□□ -1.87
YLR040CQ07988 NUP159YIL115C 4383 nt3.35□□□□□ -1.87
YLR040CQ07988 SPA2YLL021W 4401 nt3.35□□□□□ -1.87
YLR040CQ07988 RDS1YCR106W 2499 nt3.34□□□□□ -1.87
YLR040CQ07988 EMP70YLR083C 2004 nt3.34□□□□□ -1.87
YLR040CQ07988 URA2YJL130C 6645 nt3.34□□□□□ -1.87
YLR040CQ07988 YDL180WYDL180W 1644 nt3.34□□□□□ -1.87
YLR040CQ07988 YDR061WYDR061W 1620 nt3.34□□□□□ -1.87
YLR040CQ07988 YER066C-AYER066C-A 501 nt3.34□□□□□ -1.87
YLR040CQ07988 NOP19YGR251W 591 nt3.34□□□□□ -1.87
YLR040CQ07988 HYR1YIR037W 492 nt3.34□□□□□ -1.87
YLR040CQ07988 LSM2YBL026W 288 nt3.34□□□□□ -1.87
YLR040CQ07988 SLM6YBR266C 453 nt3.34□□□□□ -1.87
YLR040CQ07988 SSM4YIL030C 3960 nt3.34□□□□□ -1.87
YLR040CQ07988 ARG5,6YER069W 2592 nt3.34□□□□□ -1.88
YLR040CQ07988 YBP1YBR216C 2025 nt3.34□□□□□ -1.88
YLR040CQ07988 TAF1YGR274C 3201 nt3.34□□□□□ -1.88
YLR040CQ07988 BAR1YIL015W 1764 nt3.33□□□□□ -1.88
YLR040CQ07988 YSW1YBR148W 1830 nt3.33□□□□□ -1.88
YLR040CQ07988 RPS26BYER131W 360 nt3.33□□□□□ -1.88
YLR040CQ07988 IGO2YHR132W-A 396 nt3.33□□□□□ -1.88
YLR040CQ07988 RPS21BYJL136C 264 nt3.33□□□□□ -1.88
YLR040CQ07988 ANB1YJR047C 474 nt3.33□□□□□ -1.88
YLR040CQ07988 YPL142CYPL142C 318 nt3.33□□□□□ -1.88
YLR040CQ07988 KIN82YCR091W 2163 nt3.33□□□□□ -1.88
YLR040CQ07988 PEX1YKL197C 3132 nt3.33□□□□□ -1.88
YLR040CQ07988 VIP1YLR410W 3441 nt3.33□□□□□ -1.88
YLR040CQ07988 RPN2YIL075C 2838 nt3.33□□□□□ -1.88
YLR040CQ07988 SSP1YHR184W 1716 nt3.33□□□□□ -1.88
YLR040CQ07988 YKL100CYKL100C 1764 nt3.33□□□□□ -1.88
YLR040CQ07988 IRC10YOL015W 1761 nt3.33□□□□□ -1.88
YLR040CQ07988 CPA2YJR109C 3357 nt3.32□□□□□ -1.88
YLR040CQ07988 STU1YBL034C 4542 nt3.32□□□□□ -1.88
YLR040CQ07988 ATP8Q0080 147 nt3.32□□□□□ -1.88
YLR040CQ07988 YGL063C-AYGL063C-A 150 nt3.32□□□□□ -1.88
YLR040CQ07988 PAU13YHL046C 363 nt3.32□□□□□ -1.88
YLR040CQ07988 MRP8YKL142W 660 nt3.32□□□□□ -1.88
YLR040CQ07988 YOL019W-AYOL019W-A 153 nt3.32□□□□□ -1.88
YLR040CQ07988 YPL238CYPL238C 390 nt3.32□□□□□ -1.88
YLR040CQ07988 BYE1YKL005C 1785 nt3.32□□□□□ -1.88
YLR040CQ07988 HBT1YDL223C 3141 nt3.32□□□□□ -1.88
YLR040CQ07988 SRB4YER022W 2064 nt3.31□□□□□ -1.88
YLR040CQ07988 ALG8YOR067C 1734 nt3.31□□□□□ -1.88
YLR040CQ07988 YCK3YER123W 1575 nt3.31□□□□□ -1.88
YLR040CQ07988 CDC36YDL165W 576 nt3.31□□□□□ -1.88
YLR040CQ07988 ARF1YDL192W 546 nt3.31□□□□□ -1.88
YLR040CQ07988 AIM26YKL037W 357 nt3.31□□□□□ -1.88
YLR040CQ07988 SMA2YML066C 1110 nt3.31□□□□□ -1.88
YLR040CQ07988 PRE8YML092C 753 nt3.31□□□□□ -1.88
YLR040CQ07988 IRC23YOR044W 474 nt3.31□□□□□ -1.88
YLR040CQ07988 YPL229WYPL229W 621 nt3.31□□□□□ -1.88
YLR040CQ07988 MSD1YPL104W 1977 nt3.31□□□□□ -1.88
YLR040CQ07988 RPL29YFR032C-A 180 nt3.3□□□□□ -1.88
YLR040CQ07988 tV(CAC)DtV(CAC)D 73 nt3.3□□□□□ -1.88
YLR040CQ07988 tV(CAC)HtV(CAC)H 73 nt3.3□□□□□ -1.88
YLR040CQ07988 GTT2YLL060C 702 nt3.3□□□□□ -1.88
YLR040CQ07988 RSF2YJR127C 4143 nt3.29□□□□□ -1.88
YLR040CQ07988 RRN6YBL014C 2685 nt3.29□□□□□ -1.88
YLR040CQ07988 ATP22YDR350C 2055 nt3.29□□□□□ -1.88
YLR040CQ07988 SEA4YBL104C 3117 nt3.29□□□□□ -1.88
YLR040CQ07988 YDR169C-AYDR169C-A 150 nt3.29□□□□□ -1.88
YLR040CQ07988 YFR056CYFR056C 369 nt3.29□□□□□ -1.88
YLR040CQ07988 RPL30YGL030W 318 nt3.29□□□□□ -1.88
YLR040CQ07988 RAD6YGL058W 519 nt3.29□□□□□ -1.88
YLR040CQ07988 YMR307C-AYMR307C-A 195 nt3.29□□□□□ -1.88
YLR040CQ07988 CWH41YGL027C 2502 nt3.29□□□□□ -1.88
YLR040CQ07988 SNX41YDR425W 1878 nt3.28□□□□□ -1.88
YLR040CQ07988 YEL018C-AYEL018C-A 534 nt3.28□□□□□ -1.88
YLR040CQ07988 YEL032C-AYEL032C-A 162 nt3.28□□□□□ -1.88
YLR040CQ07988 ISD11YER048W-A 285 nt3.28□□□□□ -1.88
YLR040CQ07988 RPC10YHR143W-A 213 nt3.28□□□□□ -1.88
YLR040CQ07988 YKL111CYKL111C 336 nt3.28□□□□□ -1.88
YLR040CQ07988 RPL37AYLR185W 267 nt3.28□□□□□ -1.88
YLR040CQ07988 RPB11YOL005C 363 nt3.28□□□□□ -1.88
YLR040CQ07988 YPR108W-AYPR108W-A 213 nt3.28□□□□□ -1.88
YLR040CQ07988 ALA1YOR335C 2877 nt3.27□□□□□ -1.89
YLR040CQ07988 RPB9YGL070C 369 nt3.27□□□□□ -1.89
YLR040CQ07988 LSM1YJL124C 519 nt3.27□□□□□ -1.89
YLR040CQ07988 PFD1YJL179W 330 nt3.27□□□□□ -1.89
YLR040CQ07988 YJL182CYJL182C 318 nt3.27□□□□□ -1.89
YLR040CQ07988 SHH3YMR118C 591 nt3.27□□□□□ -1.89
YLR040CQ07988 RPL9BYNL067W 576 nt3.27□□□□□ -1.89
YLR040CQ07988 RPS8AYBL072C 603 nt3.27□□□□□ -1.89
YLR040CQ07988 YBL073WYBL073W 312 nt3.27□□□□□ -1.89
YLR040CQ07988 YBR085C-AYBR085C-A 258 nt3.27□□□□□ -1.89
YLR040CQ07988 SPT10YJL127C 1923 nt3.27□□□□□ -1.89
YLR040CQ07988 SQS1YNL224C 2304 nt3.26□□□□□ -1.89
YLR040CQ07988 TLC1TLC1 1301 nt3.26□□□□□ -1.89
YLR040CQ07988 SLA1YBL007C 3735 nt3.26□□□□□ -1.89
YLR040CQ07988 MDN1YLR106C 14733 nt3.26□□□□□ -1.89
Retrieved 100 of 7,029 protein–RNA pairs in 73.1 ms