Protein–RNA interactions for Protein: Q07807

PUF3, mRNA-binding protein PUF3, yeastyeast

Known RBP RIP-Chip data

Length 879 aa.

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Protein RNA Prediction (catRAPID) Interaction (RIP-Chip)
Gene UniProt Accession Gene Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score Detected Interaction
PUF3Q07807 BYE1YKL005C 1785 nt3.93□□□□□ -1.78
PUF3Q07807 RKM1YPL208W 1752 nt3.93□□□□□ -1.78
PUF3Q07807 FKH2YNL068C 2589 nt3.93□□□□□ -1.78
PUF3Q07807 NUP85YJR042W 2235 nt3.93□□□□□ -1.78
PUF3Q07807 YPR003CYPR003C 2265 nt3.92□□□□□ -1.78
PUF3Q07807 YCR081C-AYCR081C-A 237 nt3.92□□□□□ -1.78
PUF3Q07807 YDL062WYDL062W 426 nt3.92□□□□□ -1.78
PUF3Q07807 RPL40AYIL148W 387 nt3.92□□□□□ -1.78
PUF3Q07807 YJL150WYJL150W 303 nt3.92□□□□□ -1.78
PUF3Q07807 YNL179CYNL179C 438 nt3.92□□□□□ -1.78
PUF3Q07807 TRK1YJL129C 3708 nt3.92□□□□□ -1.78 RIP-Chip
PUF3Q07807 OAF3YKR064W 2592 nt3.92□□□□□ -1.78
PUF3Q07807 IMH1YLR309C 2736 nt3.91□□□□□ -1.78
PUF3Q07807 ERG28YER044C 447 nt3.91□□□□□ -1.78
PUF3Q07807 PXR1YGR280C 816 nt3.91□□□□□ -1.78
PUF3Q07807 YJL135WYJL135W 318 nt3.91□□□□□ -1.78
PUF3Q07807 RPS21BYJL136C 264 nt3.91□□□□□ -1.78
PUF3Q07807 VAC14YLR386W 2643 nt3.91□□□□□ -1.78
PUF3Q07807 ASI1YMR119W 1875 nt3.91□□□□□ -1.78
PUF3Q07807 HUB1YNR032C-A 222 nt3.91□□□□□ -1.78
PUF3Q07807 YPL080CYPL080C 327 nt3.91□□□□□ -1.78
PUF3Q07807 MCM7YBR202W 2538 nt3.91□□□□□ -1.78
PUF3Q07807 YKL100CYKL100C 1764 nt3.91□□□□□ -1.78
PUF3Q07807 SWH1YAR042W 3567 nt3.91□□□□□ -1.78
PUF3Q07807 POL1YNL102W 4407 nt3.9□□□□□ -1.78
PUF3Q07807 YEL1YBL060W 2064 nt3.9□□□□□ -1.78 RIP-Chip
PUF3Q07807 ECM16YMR128W 3804 nt3.9□□□□□ -1.79
PUF3Q07807 APL4YPR029C 2499 nt3.89□□□□□ -1.79
PUF3Q07807 YER088C-AYER088C-A 324 nt3.89□□□□□ -1.79
PUF3Q07807 YBL028CYBL028C 321 nt3.89□□□□□ -1.79
PUF3Q07807 YBR064WYBR064W 429 nt3.89□□□□□ -1.79
PUF3Q07807 RDS1YCR106W 2499 nt3.89□□□□□ -1.79
PUF3Q07807 APE2YKL157W 2859 nt3.89□□□□□ -1.79
PUF3Q07807 SIN4YNL236W 2925 nt3.89□□□□□ -1.79
PUF3Q07807 MNL1YHR204W 2391 nt3.89□□□□□ -1.79
PUF3Q07807 SEC6YIL068C 2418 nt3.89□□□□□ -1.79
PUF3Q07807 IOC2YLR095C 2439 nt3.89□□□□□ -1.79
PUF3Q07807 PRP39YML046W 1890 nt3.88□□□□□ -1.79
PUF3Q07807 PRM15YMR278W 1869 nt3.88□□□□□ -1.79
PUF3Q07807 GPI14YJR013W 1212 nt3.88□□□□□ -1.79
PUF3Q07807 TVP18YMR071C 504 nt3.88□□□□□ -1.79
PUF3Q07807 YOL085W-AYOL085W-A 213 nt3.88□□□□□ -1.79
PUF3Q07807 YOR008C-AYOR008C-A 225 nt3.88□□□□□ -1.79
PUF3Q07807 PFY1YOR122C 381 nt3.88□□□□□ -1.79
PUF3Q07807 IRC3YDR332W 2070 nt3.88□□□□□ -1.79
PUF3Q07807 PCF11YDR228C 1881 nt3.88□□□□□ -1.79
PUF3Q07807 SNX41YDR425W 1878 nt3.88□□□□□ -1.79
PUF3Q07807 KRI1YNL308C 1776 nt3.87□□□□□ -1.79
PUF3Q07807 OSW7YFR039C 1533 nt3.87□□□□□ -1.79
PUF3Q07807 NPR2YEL062W 1848 nt3.87□□□□□ -1.79 RIP-Chip
PUF3Q07807 AIP1YMR092C 1848 nt3.87□□□□□ -1.79
PUF3Q07807 HTL1YCR020W-B 237 nt3.87□□□□□ -1.79
PUF3Q07807 YGR164WYGR164W 336 nt3.87□□□□□ -1.79
PUF3Q07807 BAT1YHR208W 1182 nt3.87□□□□□ -1.79
PUF3Q07807 URM1YIL008W 300 nt3.87□□□□□ -1.79
PUF3Q07807 YMR230W-AYMR230W-A 189 nt3.87□□□□□ -1.79
PUF3Q07807 LCB4YOR171C 1875 nt3.87□□□□□ -1.79
PUF3Q07807 RAD61YDR014W 1944 nt3.87□□□□□ -1.79
PUF3Q07807 SPT6YGR116W 4356 nt3.87□□□□□ -1.79
PUF3Q07807 CDC45YLR103C 1953 nt3.87□□□□□ -1.79
PUF3Q07807 FLO10YKR102W 3510 nt3.87□□□□□ -1.79
PUF3Q07807 ZDS1YMR273C 2748 nt3.86□□□□□ -1.79
PUF3Q07807 MVP1YMR004W 1536 nt3.86□□□□□ -1.79
PUF3Q07807 EMC1YCL045C 2283 nt3.86□□□□□ -1.79
PUF3Q07807 YEL018C-AYEL018C-A 534 nt3.86□□□□□ -1.79
PUF3Q07807 GEP4YHR100C 558 nt3.86□□□□□ -1.79
PUF3Q07807 RPC10YHR143W-A 213 nt3.86□□□□□ -1.79
PUF3Q07807 MRP8YKL142W 660 nt3.86□□□□□ -1.79
PUF3Q07807 YPL142CYPL142C 318 nt3.86□□□□□ -1.79
PUF3Q07807 YPR136CYPR136C 513 nt3.86□□□□□ -1.79
PUF3Q07807 KIN82YCR091W 2163 nt3.86□□□□□ -1.79
PUF3Q07807 TRS120YDR407C 3870 nt3.86□□□□□ -1.79 RIP-Chip
PUF3Q07807 CHD1YER164W 4407 nt3.86□□□□□ -1.79
PUF3Q07807 YLR001CYLR001C 2589 nt3.85□□□□□ -1.79
PUF3Q07807 SLA1YBL007C 3735 nt3.85□□□□□ -1.79
PUF3Q07807 RPL35AYDL191W 363 nt3.85□□□□□ -1.79
PUF3Q07807 IES6YEL044W 501 nt3.85□□□□□ -1.79
PUF3Q07807 YGL074CYGL074C 327 nt3.85□□□□□ -1.79
PUF3Q07807 GTT2YLL060C 702 nt3.85□□□□□ -1.79
PUF3Q07807 RPL26AYLR344W 384 nt3.85□□□□□ -1.79
PUF3Q07807 LSM2YBL026W 288 nt3.85□□□□□ -1.79
PUF3Q07807 NTC20YBR188C 423 nt3.85□□□□□ -1.79
PUF3Q07807 SMI1YGR229C 1518 nt3.85□□□□□ -1.79
PUF3Q07807 YPR022CYPR022C 3402 nt3.85□□□□□ -1.79 RIP-Chip
PUF3Q07807 COP1YDL145C 3606 nt3.84□□□□□ -1.79
PUF3Q07807 EMP70YLR083C 2004 nt3.84□□□□□ -1.79
PUF3Q07807 TIF4631YGR162W 2859 nt3.84□□□□□ -1.79
PUF3Q07807 snR55snR55 98 nt3.84□□□□□ -1.79
PUF3Q07807 ADK1YDR226W 669 nt3.84□□□□□ -1.79
PUF3Q07807 BCD1YHR040W 1101 nt3.84□□□□□ -1.79
PUF3Q07807 TMA22YJR014W 597 nt3.84□□□□□ -1.79
PUF3Q07807 HSK3YKL138C-A 210 nt3.84□□□□□ -1.79
PUF3Q07807 YOR050CYOR050C 348 nt3.84□□□□□ -1.79
PUF3Q07807 FRE4YNR060W 2160 nt3.84□□□□□ -1.79
PUF3Q07807 YKL050CYKL050C 2769 nt3.84□□□□□ -1.8
PUF3Q07807 BEM4YPL161C 1902 nt3.83□□□□□ -1.8
PUF3Q07807 YKL222CYKL222C 2118 nt3.83□□□□□ -1.8
PUF3Q07807 NRP1YDL167C 2160 nt3.83□□□□□ -1.8
PUF3Q07807 VID27YNL212W 2349 nt3.83□□□□□ -1.8
PUF3Q07807 ERB1YMR049C 2424 nt3.83□□□□□ -1.8
Retrieved 100 of 7,029 protein–RNA pairs in 34.7 ms