Protein–RNA interactions for Protein: Q05787

HRD3, ERAD-associated E3 ubiquitin-protein ligase component HRD3, yeastyeast

Predictions only

Length 833 aa.

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Protein RNA Prediction (catRAPID) Interaction (RIP-Chip)
Gene UniProt Accession Gene Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score Detected Interaction
HRD3Q05787 KHA1YJL094C 2622 nt3.04□□□□□ -1.92
HRD3Q05787 YCG1YDR325W 3108 nt3.03□□□□□ -1.92
HRD3Q05787 YHL005CYHL005C 393 nt3.03□□□□□ -1.92
HRD3Q05787 YJL222W-BYJL222W-B 138 nt3.03□□□□□ -1.92
HRD3Q05787 SRL3YKR091W 741 nt3.03□□□□□ -1.92
HRD3Q05787 YNL179CYNL179C 438 nt3.03□□□□□ -1.92
HRD3Q05787 YOR199WYOR199W 330 nt3.03□□□□□ -1.92
HRD3Q05787 UTP13YLR222C 2454 nt3.03□□□□□ -1.92
HRD3Q05787 DRS2YAL026C 4068 nt3.03□□□□□ -1.93
HRD3Q05787 RAD5YLR032W 3510 nt3.02□□□□□ -1.93
HRD3Q05787 YLR001CYLR001C 2589 nt3.02□□□□□ -1.93
HRD3Q05787 YER038W-AYER038W-A 381 nt3.02□□□□□ -1.93
HRD3Q05787 YAL064W-BYAL064W-B 381 nt3.02□□□□□ -1.93
HRD3Q05787 BSC3YLR465C 309 nt3.02□□□□□ -1.93
HRD3Q05787 TVP18YMR071C 504 nt3.02□□□□□ -1.93
HRD3Q05787 HHF2YNL030W 312 nt3.02□□□□□ -1.93
HRD3Q05787 HHT2YNL031C 411 nt3.02□□□□□ -1.93
HRD3Q05787 RPL23AYBL087C 414 nt3.02□□□□□ -1.93
HRD3Q05787 RSM19YNR037C 276 nt3.02□□□□□ -1.93
HRD3Q05787 SPO14YKR031C 5052 nt3.02□□□□□ -1.93
HRD3Q05787 HFM1YGL251C 3564 nt3.01□□□□□ -1.93
HRD3Q05787 ARK1YNL020C 1917 nt3.01□□□□□ -1.93
HRD3Q05787 STP2YHR006W 1626 nt3.01□□□□□ -1.93
HRD3Q05787 USE1YGL098W 738 nt3.01□□□□□ -1.93
HRD3Q05787 YOL159C-AYOL159C-A 273 nt3.01□□□□□ -1.93
HRD3Q05787 HSP10YOR020C 321 nt3.01□□□□□ -1.93
HRD3Q05787 YPL197CYPL197C 414 nt3.01□□□□□ -1.93
HRD3Q05787 URB2YJR041C 3525 nt3□□□□□ -1.93
HRD3Q05787 YCR081C-AYCR081C-A 237 nt3□□□□□ -1.93
HRD3Q05787 RPB9YGL070C 369 nt3□□□□□ -1.93
HRD3Q05787 RTT102YGR275W 474 nt3□□□□□ -1.93
HRD3Q05787 RPL40BYKR094C 387 nt3□□□□□ -1.93
HRD3Q05787 TEN1YLR010C 483 nt3□□□□□ -1.93
HRD3Q05787 YOL150CYOL150C 312 nt3□□□□□ -1.93
HRD3Q05787 PFY1YOR122C 381 nt3□□□□□ -1.93
HRD3Q05787 HEM4YOR278W 828 nt3□□□□□ -1.93
HRD3Q05787 YPL039WYPL039W 951 nt3□□□□□ -1.93
HRD3Q05787 PFK26YIL107C 2484 nt2.99□□□□□ -1.93
HRD3Q05787 YDR194W-AYDR194W-A 153 nt2.99□□□□□ -1.93
HRD3Q05787 SMA2YML066C 1110 nt2.99□□□□□ -1.93
HRD3Q05787 VBA4YDR119W 2307 nt2.99□□□□□ -1.93
HRD3Q05787 ILS1YBL076C 3219 nt2.98□□□□□ -1.93
HRD3Q05787 YSP2YDR326C 4317 nt2.98□□□□□ -1.93
HRD3Q05787 MSH2YOL090W 2895 nt2.98□□□□□ -1.93
HRD3Q05787 YDL240C-AYDL240C-A 138 nt2.98□□□□□ -1.93
HRD3Q05787 LIF1YGL090W 1266 nt2.98□□□□□ -1.93
HRD3Q05787 VOA1YGR106C 798 nt2.98□□□□□ -1.93
HRD3Q05787 RNR4YGR180C 1038 nt2.98□□□□□ -1.93
HRD3Q05787 LSM8YJR022W 330 nt2.98□□□□□ -1.93
HRD3Q05787 YJR079WYJR079W 330 nt2.98□□□□□ -1.93
HRD3Q05787 RPS28BYLR264W 204 nt2.98□□□□□ -1.93
HRD3Q05787 RPS1AYLR441C 768 nt2.98□□□□□ -1.93
HRD3Q05787 RPL6AYML073C 531 nt2.98□□□□□ -1.93
HRD3Q05787 RPS12YOR369C 432 nt2.98□□□□□ -1.93
HRD3Q05787 RPS23BYPR132W 438 nt2.98□□□□□ -1.93
HRD3Q05787 SEN54YPL083C 1404 nt2.98□□□□□ -1.93
HRD3Q05787 MSB2YGR014W 3921 nt2.98□□□□□ -1.93
HRD3Q05787 YIL169CYIL169C 2988 nt2.98□□□□□ -1.93
HRD3Q05787 MNT3YIL014W 1893 nt2.98□□□□□ -1.93
HRD3Q05787 YAK1YJL141C 2424 nt2.98□□□□□ -1.93
HRD3Q05787 REG1YDR028C 3045 nt2.98□□□□□ -1.93
HRD3Q05787 NMA111YNL123W 2994 nt2.97□□□□□ -1.93
HRD3Q05787 YER039C-AYER039C-A 219 nt2.97□□□□□ -1.93
HRD3Q05787 YGL165CYGL165C 579 nt2.97□□□□□ -1.93
HRD3Q05787 LSM2YBL026W 288 nt2.97□□□□□ -1.93
HRD3Q05787 YPL080CYPL080C 327 nt2.97□□□□□ -1.93
HRD3Q05787 TSC3YBR058C-A 243 nt2.97□□□□□ -1.93
HRD3Q05787 TFC1YBR123C 1950 nt2.97□□□□□ -1.93
HRD3Q05787 ATP22YDR350C 2055 nt2.97□□□□□ -1.93
HRD3Q05787 POL2YNL262W 6669 nt2.97□□□□□ -1.93
HRD3Q05787 STN1YDR082W 1485 nt2.96□□□□□ -1.93
HRD3Q05787 CSR2YPR030W 3366 nt2.96□□□□□ -1.94
HRD3Q05787 ORC1YML065W 2745 nt2.96□□□□□ -1.94
HRD3Q05787 YKL136WYKL136W 399 nt2.96□□□□□ -1.94
HRD3Q05787 PRE8YML092C 753 nt2.96□□□□□ -1.94
HRD3Q05787 BNI4YNL233W 2679 nt2.96□□□□□ -1.94
HRD3Q05787 VAS1YGR094W 3315 nt2.96□□□□□ -1.94
HRD3Q05787 RNH70YGR276C 1662 nt2.95□□□□□ -1.94
HRD3Q05787 MSL5YLR116W 1431 nt2.95□□□□□ -1.94
HRD3Q05787 RPL27BYDR471W 411 nt2.95□□□□□ -1.94
HRD3Q05787 SDH7YDR511W 402 nt2.95□□□□□ -1.94
HRD3Q05787 RRT13YER066W 558 nt2.95□□□□□ -1.94
HRD3Q05787 YIL115W-AYIL115W-A 372 nt2.95□□□□□ -1.94
HRD3Q05787 YLR434CYLR434C 384 nt2.95□□□□□ -1.94
HRD3Q05787 FUN30YAL019W 3396 nt2.95□□□□□ -1.94
HRD3Q05787 YDR034C-DYDR034C-D 5313 nt2.95□□□□□ -1.94
HRD3Q05787 BFR1YOR198C 1413 nt2.94□□□□□ -1.94
HRD3Q05787 BIT61YJL058C 1632 nt2.94□□□□□ -1.94
HRD3Q05787 MYO5YMR109W 3660 nt2.94□□□□□ -1.94
HRD3Q05787 AST2YER101C 1293 nt2.94□□□□□ -1.94
HRD3Q05787 RPL29YFR032C-A 180 nt2.94□□□□□ -1.94
HRD3Q05787 RAD6YGL058W 519 nt2.94□□□□□ -1.94
HRD3Q05787 SIP18YMR175W 240 nt2.94□□□□□ -1.94
HRD3Q05787 ZEO1YOL109W 342 nt2.94□□□□□ -1.94
HRD3Q05787 RPS7AYOR096W 573 nt2.94□□□□□ -1.94
HRD3Q05787 YOR105WYOR105W 327 nt2.94□□□□□ -1.94
HRD3Q05787 GCD6YDR211W 2139 nt2.93□□□□□ -1.94
HRD3Q05787 FLO1YAR050W 4614 nt2.93□□□□□ -1.94
HRD3Q05787 PMR1YGL167C 2853 nt2.93□□□□□ -1.94
HRD3Q05787 KIN82YCR091W 2163 nt2.93□□□□□ -1.94
Retrieved 100 of 7,029 protein–RNA pairs in 60.6 ms