Protein–RNA interactions for Protein: P38854

TDA11, Topoisomerase I damage affected protein 11, yeastyeast

Predictions only

Length 504 aa.

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Protein RNA Prediction (catRAPID) Interaction (RIP-Chip)
Gene UniProt Accession Gene Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score Detected Interaction
TDA11P38854 YBR062CYBR062C 543 nt2.1□□□□□ -2.07
TDA11P38854 SAG1YJR004C 1953 nt2.1□□□□□ -2.07
TDA11P38854 PRK1YIL095W 2433 nt2.1□□□□□ -2.07
TDA11P38854 SMC6YLR383W 3345 nt2.1□□□□□ -2.07
TDA11P38854 YIL166CYIL166C 1629 nt2.09□□□□□ -2.07
TDA11P38854 BRE1YDL074C 2103 nt2.09□□□□□ -2.07
TDA11P38854 SHS1YDL225W 1656 nt2.09□□□□□ -2.07
TDA11P38854 YCR100CYCR100C 951 nt2.09□□□□□ -2.07
TDA11P38854 STE2YFL026W 1296 nt2.09□□□□□ -2.07
TDA11P38854 YET1YKL065C 621 nt2.09□□□□□ -2.07
TDA11P38854 YAL066WYAL066W 309 nt2.09□□□□□ -2.07
TDA11P38854 GIM5YML094W 492 nt2.09□□□□□ -2.07
TDA11P38854 YNR021WYNR021W 1215 nt2.09□□□□□ -2.07
TDA11P38854 DGK1YOR311C 873 nt2.09□□□□□ -2.07
TDA11P38854 SIR4YDR227W 4077 nt2.08□□□□□ -2.08
TDA11P38854 INP53YOR109W 3324 nt2.08□□□□□ -2.08
TDA11P38854 SDC1YDR469W 528 nt2.08□□□□□ -2.08
TDA11P38854 RSM28YDR494W 1086 nt2.08□□□□□ -2.08
TDA11P38854 RRF1YHR038W 693 nt2.08□□□□□ -2.08
TDA11P38854 COX3Q0275 810 nt2.08□□□□□ -2.08
TDA11P38854 ATP7YKL016C 525 nt2.08□□□□□ -2.08
TDA11P38854 ICY1YMR195W 384 nt2.08□□□□□ -2.08
TDA11P38854 ARR2YPR200C 393 nt2.08□□□□□ -2.08
TDA11P38854 AME1YBR211C 975 nt2.08□□□□□ -2.08
TDA11P38854 PRP6YBR055C 2700 nt2.08□□□□□ -2.08
TDA11P38854 TOR2YKL203C 7425 nt2.08□□□□□ -2.08
TDA11P38854 MRP10YDL045W-A 288 nt2.07□□□□□ -2.08
TDA11P38854 TIM9YEL020W-A 264 nt2.07□□□□□ -2.08
TDA11P38854 NTF2YER009W 378 nt2.07□□□□□ -2.08
TDA11P38854 MIX23YBL107C 591 nt2.07□□□□□ -2.08
TDA11P38854 RBL2YOR265W 321 nt2.07□□□□□ -2.08
TDA11P38854 SRL4YPL033C 846 nt2.07□□□□□ -2.08
TDA11P38854 SUS1YBR111W-A 291 nt2.07□□□□□ -2.08
TDA11P38854 UBR1YGR184C 5853 nt2.07□□□□□ -2.08
TDA11P38854 YRR1YOR162C 2433 nt2.07□□□□□ -2.08
TDA11P38854 SLN1YIL147C 3663 nt2.06□□□□□ -2.08
TDA11P38854 RRP12YPL012W 3687 nt2.06□□□□□ -2.08
TDA11P38854 NUP100YKL068W 2880 nt2.06□□□□□ -2.08
TDA11P38854 GCN2YDR283C 4980 nt2.06□□□□□ -2.08
TDA11P38854 YER158W-AYER158W-A 216 nt2.06□□□□□ -2.08
TDA11P38854 YHR071C-AYHR071C-A 321 nt2.06□□□□□ -2.08
TDA11P38854 BRX1YOL077C 876 nt2.06□□□□□ -2.08
TDA11P38854 SFG1YOR315W 1041 nt2.06□□□□□ -2.08
TDA11P38854 PSO2YMR137C 1986 nt2.06□□□□□ -2.08
TDA11P38854 MGA2YIR033W 3342 nt2.06□□□□□ -2.08
TDA11P38854 SEC16YPL085W 6588 nt2.06□□□□□ -2.08
TDA11P38854 YCR013CYCR013C 648 nt2.05□□□□□ -2.08
TDA11P38854 RPS17BYDR447C 411 nt2.05□□□□□ -2.08
TDA11P38854 YER189WYER189W 369 nt2.05□□□□□ -2.08
TDA11P38854 THG1YGR024C 714 nt2.05□□□□□ -2.08
TDA11P38854 RPS17AYML024W 411 nt2.05□□□□□ -2.08
TDA11P38854 YNL046WYNL046W 519 nt2.05□□□□□ -2.08
TDA11P38854 SWM2YNR004W 441 nt2.05□□□□□ -2.08
TDA11P38854 TRM7YBR061C 933 nt2.05□□□□□ -2.08
TDA11P38854 VPS38YLR360W 1320 nt2.05□□□□□ -2.08
TDA11P38854 NUP170YBL079W 4509 nt2.05□□□□□ -2.08
TDA11P38854 SEC31YDL195W 3822 nt2.04□□□□□ -2.08
TDA11P38854 YDR179W-AYDR179W-A 1392 nt2.04□□□□□ -2.08
TDA11P38854 YDR261W-AYDR261W-A 1317 nt2.04□□□□□ -2.08
TDA11P38854 LOC1YFR001W 615 nt2.04□□□□□ -2.08
TDA11P38854 YBL068W-AYBL068W-A 237 nt2.04□□□□□ -2.08
TDA11P38854 SME1YOR159C 285 nt2.04□□□□□ -2.08
TDA11P38854 SPR2YOR214C 711 nt2.04□□□□□ -2.08
TDA11P38854 YPL119C-AYPL119C-A 264 nt2.04□□□□□ -2.08
TDA11P38854 RSA1YPL193W 1146 nt2.04□□□□□ -2.08
TDA11P38854 YEL043WYEL043W 2871 nt2.04□□□□□ -2.08
TDA11P38854 AFI1YOR129C 2682 nt2.04□□□□□ -2.08
TDA11P38854 UBP1YDL122W 2430 nt2.03□□□□□ -2.08
TDA11P38854 SSQ1YLR369W 1974 nt2.03□□□□□ -2.08
TDA11P38854 SNF12YNR023W 1701 nt2.03□□□□□ -2.08
TDA11P38854 ASG1YIL130W 2895 nt2.03□□□□□ -2.08
TDA11P38854 YGL230CYGL230C 444 nt2.03□□□□□ -2.08
TDA11P38854 PRP38YGR075C 729 nt2.03□□□□□ -2.08
TDA11P38854 YGR242WYGR242W 309 nt2.03□□□□□ -2.08
TDA11P38854 YLR285C-AYLR285C-A 171 nt2.03□□□□□ -2.08
TDA11P38854 DCP1YOL149W 696 nt2.03□□□□□ -2.08
TDA11P38854 YBR277CYBR277C 402 nt2.03□□□□□ -2.08
TDA11P38854 YDR199WYDR199W 366 nt2.02□□□□□ -2.09
TDA11P38854 RPS26BYER131W 360 nt2.02□□□□□ -2.09
TDA11P38854 YHR050W-AYHR050W-A 171 nt2.02□□□□□ -2.09
TDA11P38854 YBL012CYBL012C 402 nt2.02□□□□□ -2.09
TDA11P38854 PAI3YMR174C 207 nt2.02□□□□□ -2.09
TDA11P38854 YOR169CYOR169C 465 nt2.02□□□□□ -2.09
TDA11P38854 YPR145C-AYPR145C-A 237 nt2.02□□□□□ -2.09
TDA11P38854 ADF1YCL058W-A 342 nt2.02□□□□□ -2.09
TDA11P38854 NPR1YNL183C 2373 nt2.02□□□□□ -2.09
TDA11P38854 VPS16YPL045W 2397 nt2.02□□□□□ -2.09
TDA11P38854 YCR099CYCR099C 468 nt2.01□□□□□ -2.09
TDA11P38854 YLR217WYLR217W 324 nt2.01□□□□□ -2.09
TDA11P38854 RIO2YNL207W 1278 nt2.01□□□□□ -2.09
TDA11P38854 MF(ALPHA)1YPL187W 498 nt2.01□□□□□ -2.09
TDA11P38854 YPR089WYPR089W 2667 nt2.01□□□□□ -2.09
TDA11P38854 RAV1YJR033C 4074 nt2.01□□□□□ -2.09
TDA11P38854 NCS2YNL119W 1482 nt2.01□□□□□ -2.09
TDA11P38854 DIS3YOL021C 3006 nt2□□□□□ -2.09
TDA11P38854 snR78snR78 87 nt2□□□□□ -2.09
TDA11P38854 YDR203WYDR203W 318 nt2□□□□□ -2.09
TDA11P38854 CAJ1YER048C 1176 nt2□□□□□ -2.09
TDA11P38854 YGL165CYGL165C 579 nt2□□□□□ -2.09
TDA11P38854 YJL086CYJL086C 369 nt2□□□□□ -2.09
Retrieved 100 of 7,029 protein–RNA pairs in 82.2 ms