Protein–RNA interactions for Protein: Q9P2X8

LINC00474, Putative uncharacterized protein encoded by LINC00474, humanhuman

Predictions only

Length 69 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
LINC00474Q9P2X8 SNAP23-214ENST00000567094 834 ntTSL 3 BASIC13.39□□□□□ -0.27
LINC00474Q9P2X8 DISC1-224ENST00000639374 1071 ntAPPRIS ALT2 TSL 1 (best) BASIC13.39□□□□□ -0.27
LINC00474Q9P2X8 CNIH2-201ENST00000311445 1356 ntAPPRIS P2 TSL 1 (best) BASIC13.39□□□□□ -0.27
LINC00474Q9P2X8 AC132008.2-203ENST00000418868 1552 ntTSL 1 (best) BASIC13.39□□□□□ -0.27
LINC00474Q9P2X8 SLC41A3-201ENST00000315891 1797 ntTSL 1 (best) BASIC13.39□□□□□ -0.27
LINC00474Q9P2X8 TANGO2-212ENST00000434570 2180 ntTSL 2 BASIC13.39□□□□□ -0.27
LINC00474Q9P2X8 RAB1A-204ENST00000409892 2254 ntTSL 2 BASIC13.39□□□□□ -0.27
LINC00474Q9P2X8 GATAD1-201ENST00000287957 3361 ntAPPRIS P1 TSL 1 (best) BASIC13.39□□□□□ -0.27
LINC00474Q9P2X8 LTBP4-201ENST00000204005 5032 ntAPPRIS ALT2 TSL 1 (best) BASIC13.39□□□□□ -0.27
LINC00474Q9P2X8 NUDT4-202ENST00000415493 4839 ntAPPRIS ALT1 TSL 1 (best) BASIC13.39□□□□□ -0.27
LINC00474Q9P2X8 SLC16A10-202ENST00000368851 2508 ntAPPRIS P1 TSL 1 (best) BASIC13.39□□□□□ -0.27
LINC00474Q9P2X8 GFER-201ENST00000248114 2345 ntAPPRIS P1 TSL 1 (best) BASIC13.39□□□□□ -0.27
LINC00474Q9P2X8 NELFCD-213ENST00000602795 2305 ntAPPRIS P1 TSL 1 (best) BASIC13.39□□□□□ -0.27
LINC00474Q9P2X8 SHANK1-202ENST00000359082 6459 ntTSL 5 BASIC13.39□□□□□ -0.27
LINC00474Q9P2X8 BCKDK-201ENST00000219794 2128 ntAPPRIS P1 TSL 1 (best) BASIC13.39□□□□□ -0.27
LINC00474Q9P2X8 LIMS2-201ENST00000324938 2111 ntAPPRIS P3 TSL 1 (best) BASIC13.39□□□□□ -0.27
LINC00474Q9P2X8 ERLIN1-203ENST00000421367 5792 ntAPPRIS P1 TSL 1 (best) BASIC13.39□□□□□ -0.27
LINC00474Q9P2X8 TM7SF2-201ENST00000279263 1722 ntAPPRIS P1 TSL 1 (best) BASIC13.39□□□□□ -0.27
LINC00474Q9P2X8 ADGRG2-210ENST00000379878 4803 ntTSL 1 (best) BASIC13.38□□□□□ -0.27
LINC00474Q9P2X8 TFG-201ENST00000240851 1978 ntAPPRIS P3 TSL 1 (best) BASIC13.38□□□□□ -0.27
LINC00474Q9P2X8 CCNL1-203ENST00000461804 1998 ntTSL 2 BASIC13.38□□□□□ -0.27
LINC00474Q9P2X8 KCNH2-201ENST00000262186 4286 ntAPPRIS P1 TSL 1 (best) BASIC13.38□□□□□ -0.27
LINC00474Q9P2X8 TMEM17-201ENST00000335390 1797 ntAPPRIS P1 TSL 1 (best) BASIC13.38□□□□□ -0.27
LINC00474Q9P2X8 TTYH1-203ENST00000376531 1763 ntTSL 1 (best) BASIC13.38□□□□□ -0.27
LINC00474Q9P2X8 AP000547.3-201ENST00000592918 1576 ntTSL 1 (best) BASIC13.38□□□□□ -0.27
LINC00474Q9P2X8 BCAT2-207ENST00000597011 1579 ntTSL 5 BASIC13.38□□□□□ -0.27
LINC00474Q9P2X8 GATA1-202ENST00000376670 1497 ntAPPRIS P1 TSL 1 (best) BASIC13.38□□□□□ -0.27
LINC00474Q9P2X8 COMT-202ENST00000361682 2437 ntAPPRIS P3 TSL 1 (best) BASIC13.38□□□□□ -0.27
LINC00474Q9P2X8 RARRES2-201ENST00000223271 740 ntAPPRIS P1 TSL 1 (best) BASIC13.38□□□□□ -0.27
LINC00474Q9P2X8 DTYMK-201ENST00000305784 1232 ntAPPRIS P1 TSL 1 (best) BASIC13.38□□□□□ -0.27
LINC00474Q9P2X8 UMAD1-202ENST00000463725 559 ntTSL 4 BASIC13.38□□□□□ -0.27
LINC00474Q9P2X8 AC137761.2-201ENST00000561729 223 ntBASIC13.38□□□□□ -0.27
LINC00474Q9P2X8 AC145350.3-201ENST00000569033 163 ntBASIC13.38□□□□□ -0.27
LINC00474Q9P2X8 POC1B-209ENST00000549035 2038 ntTSL 2 BASIC13.38□□□□□ -0.27
LINC00474Q9P2X8 AC084757.3-201ENST00000558061 1943 ntTSL 3 BASIC13.38□□□□□ -0.27
LINC00474Q9P2X8 TRIM3-202ENST00000359518 3042 ntAPPRIS P1 TSL 5 BASIC13.38□□□□□ -0.27
LINC00474Q9P2X8 ILDR2-205ENST00000526687 2299 ntTSL 5 BASIC13.38□□□□□ -0.27
LINC00474Q9P2X8 PSPH-202ENST00000395471 2178 ntAPPRIS P1 TSL 1 (best) BASIC13.38□□□□□ -0.27
LINC00474Q9P2X8 ST3GAL3-207ENST00000353126 1969 ntTSL 5 BASIC13.38□□□□□ -0.27
LINC00474Q9P2X8 OAF-201ENST00000328965 2525 ntAPPRIS P2 TSL 1 (best) BASIC13.38□□□□□ -0.27
LINC00474Q9P2X8 PTPA-223ENST00000452489 2526 ntTSL 1 (best) BASIC13.38□□□□□ -0.27
LINC00474Q9P2X8 KCTD13-207ENST00000568000 2528 ntAPPRIS P1 TSL 1 (best) BASIC13.38□□□□□ -0.27
LINC00474Q9P2X8 SPOP-206ENST00000504102 1865 ntAPPRIS P1 TSL 1 (best) BASIC13.38□□□□□ -0.27
LINC00474Q9P2X8 MOK-226ENST00000522874 1890 ntAPPRIS ALT2 TSL 5 BASIC13.38□□□□□ -0.27
LINC00474Q9P2X8 MIF4GD-202ENST00000325102 1306 ntAPPRIS P1 TSL 2 BASIC13.38□□□□□ -0.27
LINC00474Q9P2X8 CXXC4-201ENST00000394767 5565 ntAPPRIS P1 TSL 5 BASIC13.37□□□□□ -0.27
LINC00474Q9P2X8 MAP1LC3A-201ENST00000360668 1574 ntAPPRIS P1 TSL 1 (best) BASIC13.37□□□□□ -0.27
LINC00474Q9P2X8 TXNRD2-203ENST00000400519 3155 ntAPPRIS ALT2 TSL 1 (best) BASIC13.37□□□□□ -0.27
LINC00474Q9P2X8 HLA-G-204ENST00000376828 1490 ntAPPRIS ALT2 BASIC13.37□□□□□ -0.27
LINC00474Q9P2X8 MRGPRF-203ENST00000441623 2282 ntAPPRIS P1 TSL 2 BASIC13.37□□□□□ -0.27
LINC00474Q9P2X8 C7orf26-201ENST00000344417 2182 ntAPPRIS P1 TSL 2 BASIC13.37□□□□□ -0.27
LINC00474Q9P2X8 WWC2-AS2-201ENST00000578387 2183 ntBASIC13.37□□□□□ -0.27
LINC00474Q9P2X8 ZSCAN18-217ENST00000601144 2190 ntAPPRIS P3 TSL 1 (best) BASIC13.37□□□□□ -0.27
LINC00474Q9P2X8 ATE1-AS1-201ENST00000437593 951 ntTSL 2 BASIC13.37□□□□□ -0.27
LINC00474Q9P2X8 AC093833.1-201ENST00000442821 553 ntTSL 5 BASIC13.37□□□□□ -0.27
LINC00474Q9P2X8 AC106820.5-201ENST00000566085 789 ntTSL 3 BASIC13.37□□□□□ -0.27
LINC00474Q9P2X8 SEPT4-215ENST00000580809 952 ntTSL 1 (best) BASIC13.37□□□□□ -0.27
LINC00474Q9P2X8 AC011825.4-201ENST00000582233 473 ntTSL 2 BASIC13.37□□□□□ -0.27
LINC00474Q9P2X8 TYMP-202ENST00000395678 1614 ntAPPRIS P3 TSL 1 (best) BASIC13.37□□□□□ -0.27
LINC00474Q9P2X8 GUSB-201ENST00000304895 2300 ntAPPRIS P1 TSL 1 (best) BASIC13.37□□□□□ -0.27
LINC00474Q9P2X8 TAPT1-201ENST00000405303 4591 ntAPPRIS P1 TSL 1 (best) BASIC13.37□□□□□ -0.27
LINC00474Q9P2X8 ORAI1-202ENST00000617316 2138 ntAPPRIS P1 TSL 1 (best) BASIC13.37□□□□□ -0.27
LINC00474Q9P2X8 MAPT-209ENST00000446361 5345 ntAPPRIS ALT2 TSL 1 (best) BASIC13.37□□□□□ -0.27
LINC00474Q9P2X8 RAPH1-210ENST00000453034 2394 ntAPPRIS ALT2 TSL 1 (best) BASIC13.37□□□□□ -0.27
LINC00474Q9P2X8 TMEM132A-202ENST00000453848 3346 ntAPPRIS ALT2 TSL 1 (best) BASIC13.37□□□□□ -0.27
LINC00474Q9P2X8 ENTPD5-206ENST00000556242 1437 ntTSL 5 BASIC13.37□□□□□ -0.27
LINC00474Q9P2X8 SOAT2-201ENST00000301466 2044 ntAPPRIS P1 TSL 1 (best) BASIC13.37□□□□□ -0.27
LINC00474Q9P2X8 COL8A2-203ENST00000481785 2036 ntTSL 1 (best) BASIC13.37□□□□□ -0.27
LINC00474Q9P2X8 PXK-211ENST00000484288 2031 ntTSL 1 (best) BASIC13.37□□□□□ -0.27
LINC00474Q9P2X8 TERF1-202ENST00000276603 1677 ntAPPRIS P4 TSL 1 (best) BASIC13.37□□□□□ -0.27
LINC00474Q9P2X8 CPXM2-204ENST00000615851 2512 ntTSL 5 BASIC13.37□□□□□ -0.27
LINC00474Q9P2X8 RUNX2-202ENST00000371432 5487 ntAPPRIS ALT2 TSL 5 BASIC13.36□□□□□ -0.27
LINC00474Q9P2X8 GPR137-201ENST00000313074 1485 ntTSL 5 BASIC13.36□□□□□ -0.27
LINC00474Q9P2X8 GPR137-203ENST00000411458 1495 ntTSL 2 BASIC13.36□□□□□ -0.27
LINC00474Q9P2X8 ZNF213-201ENST00000396878 3313 ntAPPRIS P1 TSL 1 (best) BASIC13.36□□□□□ -0.27
LINC00474Q9P2X8 IRX4-201ENST00000231357 2221 ntAPPRIS P1 TSL 1 (best) BASIC13.36□□□□□ -0.27
LINC00474Q9P2X8 GAS2L1P2-201ENST00000436355 1356 ntBASIC13.36□□□□□ -0.27
LINC00474Q9P2X8 DIO3-201ENST00000510508 2102 ntAPPRIS P1 BASIC13.36□□□□□ -0.27
LINC00474Q9P2X8 SH2B2-202ENST00000536178 2113 ntAPPRIS P1 TSL 1 (best) BASIC13.36□□□□□ -0.27
LINC00474Q9P2X8 Z98882.1-201ENST00000622160 2253 ntBASIC13.36□□□□□ -0.27
LINC00474Q9P2X8 ME2-206ENST00000638410 2289 ntTSL 5 BASIC13.36□□□□□ -0.27
LINC00474Q9P2X8 ME2-210ENST00000639255 2262 ntTSL 5 BASIC13.36□□□□□ -0.27
LINC00474Q9P2X8 CXXC5-201ENST00000302517 2658 ntAPPRIS P1 TSL 1 (best) BASIC13.36□□□□□ -0.27
LINC00474Q9P2X8 BAALC-205ENST00000438105 2662 ntTSL 1 (best) BASIC13.36□□□□□ -0.27
LINC00474Q9P2X8 EMC7-201ENST00000256545 1155 ntAPPRIS P1 TSL 1 (best) BASIC13.36□□□□□ -0.27
LINC00474Q9P2X8 GP9-201ENST00000307395 889 ntAPPRIS P1 TSL 1 (best) BASIC13.36□□□□□ -0.27
LINC00474Q9P2X8 KRT18P5-201ENST00000436075 1291 ntBASIC13.36□□□□□ -0.27
LINC00474Q9P2X8 COL19A1-203ENST00000478620 589 ntTSL 1 (best) BASIC13.36□□□□□ -0.27
LINC00474Q9P2X8 YJEFN3-203ENST00000514277 995 ntTSL 1 (best) BASIC13.36□□□□□ -0.27
LINC00474Q9P2X8 SGMS1-210ENST00000619438 1680 ntTSL 5 BASIC13.36□□□□□ -0.27
LINC00474Q9P2X8 CDKN2C-203ENST00000396148 2086 ntAPPRIS P1 TSL 1 (best) BASIC13.36□□□□□ -0.27
LINC00474Q9P2X8 PXYLP1-203ENST00000502783 2066 ntTSL 2 BASIC13.36□□□□□ -0.27
LINC00474Q9P2X8 EMX2-201ENST00000442245 2710 ntTSL 2 BASIC13.36□□□□□ -0.27
LINC00474Q9P2X8 PPP1R12B-212ENST00000480184 1808 ntTSL 1 (best) BASIC13.36□□□□□ -0.27
LINC00474Q9P2X8 TPD52L1-203ENST00000368402 1308 ntTSL 1 (best) BASIC13.36□□□□□ -0.27
LINC00474Q9P2X8 PLCB2-204ENST00000557821 4517 ntAPPRIS ALT1 TSL 1 (best) BASIC13.36□□□□□ -0.27
LINC00474Q9P2X8 VRK2-201ENST00000340157 1888 ntAPPRIS P3 TSL 1 (best) BASIC13.36□□□□□ -0.27
LINC00474Q9P2X8 CHRNA4-207ENST00000615287 5643 ntTSL 5 BASIC13.36□□□□□ -0.27
LINC00474Q9P2X8 CLN8-213ENST00000637156 1897 ntAPPRIS P1 TSL 5 BASIC13.36□□□□□ -0.27
LINC00474Q9P2X8 TMEM25-205ENST00000411589 2442 ntAPPRIS ALT2 TSL 2 BASIC13.35□□□□□ -0.27
Retrieved 100 of 98,524 protein–RNA pairs in 128.9 ms