Protein–RNA interactions for Protein: Q08285

RRP40, Exosome complex component RRP40, yeastyeast

Known RBP Predictions only

Length 240 aa.

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Protein RNA Prediction (catRAPID) Interaction (RIP-Chip)
Gene UniProt Accession Gene Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score Detected Interaction
RRP40Q08285 UFD4YKL010C 4452 nt1.97□□□□□ -2.09
RRP40Q08285 UBP2YOR124C 3819 nt1.97□□□□□ -2.09
RRP40Q08285 CBS2YDR197W 1170 nt1.97□□□□□ -2.09
RRP40Q08285 OST5YGL226C-A 261 nt1.97□□□□□ -2.09
RRP40Q08285 TWF1YGR080W 999 nt1.97□□□□□ -2.09
RRP40Q08285 YHL002C-AYHL002C-A 489 nt1.97□□□□□ -2.09
RRP40Q08285 SVP26YHR181W 687 nt1.97□□□□□ -2.09
RRP40Q08285 YPT52YKR014C 705 nt1.97□□□□□ -2.09
RRP40Q08285 RNP1YLL046C 750 nt1.97□□□□□ -2.09
RRP40Q08285 ECI1YLR284C 843 nt1.97□□□□□ -2.09
RRP40Q08285 YMR320WYMR320W 306 nt1.97□□□□□ -2.09
RRP40Q08285 YIP3YNL044W 531 nt1.97□□□□□ -2.09
RRP40Q08285 SGT1YOR057W 1188 nt1.97□□□□□ -2.09
RRP40Q08285 MF(ALPHA)1YPL187W 498 nt1.97□□□□□ -2.09
RRP40Q08285 MSS18YPR134W 807 nt1.97□□□□□ -2.09
RRP40Q08285 SHG1YBR258C 429 nt1.97□□□□□ -2.09
RRP40Q08285 BFR1YOR198C 1413 nt1.97□□□□□ -2.09
RRP40Q08285 PUT3YKL015W 2940 nt1.97□□□□□ -2.09
RRP40Q08285 FKS1YLR342W 5631 nt1.97□□□□□ -2.09
RRP40Q08285 TRZ1YKR079C 2517 nt1.96□□□□□ -2.09
RRP40Q08285 YDR034C-CYDR034C-C 1317 nt1.96□□□□□ -2.1
RRP40Q08285 YLR410W-AYLR410W-A 1317 nt1.96□□□□□ -2.1
RRP40Q08285 SRP1YNL189W 1629 nt1.96□□□□□ -2.1
RRP40Q08285 CBF2YGR140W 2871 nt1.96□□□□□ -2.1
RRP40Q08285 YCR090CYCR090C 549 nt1.96□□□□□ -2.1
RRP40Q08285 YEA4YEL004W 1029 nt1.96□□□□□ -2.1
RRP40Q08285 EMP24YGL200C 612 nt1.96□□□□□ -2.1
RRP40Q08285 RFA3YJL173C 369 nt1.96□□□□□ -2.1
RRP40Q08285 UTP30YKR060W 825 nt1.96□□□□□ -2.1
RRP40Q08285 YLL044WYLL044W 447 nt1.96□□□□□ -2.1
RRP40Q08285 RMP1YLR145W 606 nt1.96□□□□□ -2.1
RRP40Q08285 RRT16YNL105W 429 nt1.96□□□□□ -2.1
RRP40Q08285 INO80YGL150C 4470 nt1.95□□□□□ -2.1
RRP40Q08285 YRR1YOR162C 2433 nt1.95□□□□□ -2.1
RRP40Q08285 ATC1YDR184C 885 nt1.95□□□□□ -2.1
RRP40Q08285 ADK1YDR226W 669 nt1.95□□□□□ -2.1
RRP40Q08285 YER119C-AYER119C-A 372 nt1.95□□□□□ -2.1
RRP40Q08285 GLC7YER133W 939 nt1.95□□□□□ -2.1
RRP40Q08285 CTK2YJL006C 972 nt1.95□□□□□ -2.1
RRP40Q08285 AIM23YJL131C 1071 nt1.95□□□□□ -2.1
RRP40Q08285 DGR1YNL130C-A 147 nt1.95□□□□□ -2.1
RRP40Q08285 CUR1YPR158W 759 nt1.95□□□□□ -2.1
RRP40Q08285 YCL023CYCL023C 348 nt1.95□□□□□ -2.1
RRP40Q08285 SSQ1YLR369W 1974 nt1.95□□□□□ -2.1
RRP40Q08285 COS111YBR203W 2775 nt1.95□□□□□ -2.1
RRP40Q08285 ALY1YKR021W 2748 nt1.95□□□□□ -2.1
RRP40Q08285 KAP123YER110C 3342 nt1.94□□□□□ -2.1
RRP40Q08285 UBC13YDR092W 462 nt1.94□□□□□ -2.1
RRP40Q08285 YDR262WYDR262W 819 nt1.94□□□□□ -2.1
RRP40Q08285 YER189WYER189W 369 nt1.94□□□□□ -2.1
RRP40Q08285 YHR071C-AYHR071C-A 321 nt1.94□□□□□ -2.1
RRP40Q08285 GPX1YKL026C 504 nt1.94□□□□□ -2.1
RRP40Q08285 NEJ1YLR265C 1029 nt1.94□□□□□ -2.1
RRP40Q08285 MRPS8YMR158W 468 nt1.94□□□□□ -2.1
RRP40Q08285 SIP18YMR175W 240 nt1.94□□□□□ -2.1
RRP40Q08285 VAM3YOR106W 852 nt1.94□□□□□ -2.1
RRP40Q08285 PEX27YOR193W 1131 nt1.94□□□□□ -2.1
RRP40Q08285 RSA1YPL193W 1146 nt1.94□□□□□ -2.1
RRP40Q08285 SLM4YBR077C 489 nt1.94□□□□□ -2.1
RRP40Q08285 YFR016CYFR016C 3702 nt1.94□□□□□ -2.1
RRP40Q08285 SSP1YHR184W 1716 nt1.94□□□□□ -2.1
RRP40Q08285 CST9YLR394W 1449 nt1.93□□□□□ -2.1
RRP40Q08285 TIF35YDR429C 825 nt1.93□□□□□ -2.1
RRP40Q08285 YHR022CYHR022C 771 nt1.93□□□□□ -2.1
RRP40Q08285 FYV4YHR059W 393 nt1.93□□□□□ -2.1
RRP40Q08285 LSM12YHR121W 564 nt1.93□□□□□ -2.1
RRP40Q08285 CMC1YKL137W 336 nt1.93□□□□□ -2.1
RRP40Q08285 PAU8YAL068C 363 nt1.93□□□□□ -2.1
RRP40Q08285 PAU20YOL161C 363 nt1.93□□□□□ -2.1
RRP40Q08285 PEP12YOR036W 867 nt1.93□□□□□ -2.1
RRP40Q08285 RRP15YPR143W 753 nt1.93□□□□□ -2.1
RRP40Q08285 APA1YCL050C 966 nt1.93□□□□□ -2.1
RRP40Q08285 MFB1YDR219C 1398 nt1.93□□□□□ -2.1
RRP40Q08285 SCH9YHR205W 2475 nt1.93□□□□□ -2.1
RRP40Q08285 NGG1YDR176W 2109 nt1.93□□□□□ -2.1
RRP40Q08285 YDR338CYDR338C 2088 nt1.92□□□□□ -2.1
RRP40Q08285 AGC1YPR021C 2709 nt1.92□□□□□ -2.1
RRP40Q08285 GPI17YDR434W 1605 nt1.92□□□□□ -2.1
RRP40Q08285 ELG1YOR144C 2376 nt1.92□□□□□ -2.1
RRP40Q08285 NUP100YKL068W 2880 nt1.92□□□□□ -2.1
RRP40Q08285 SLU7YDR088C 1149 nt1.92□□□□□ -2.1
RRP40Q08285 DAD4YDR320C-A 219 nt1.92□□□□□ -2.1
RRP40Q08285 PCL5YHR071W 690 nt1.92□□□□□ -2.1
RRP40Q08285 RPS17AYML024W 411 nt1.92□□□□□ -2.1
RRP40Q08285 YBL062WYBL062W 381 nt1.92□□□□□ -2.1
RRP40Q08285 NEO1YIL048W 3456 nt1.92□□□□□ -2.1
RRP40Q08285 UBR1YGR184C 5853 nt1.92□□□□□ -2.1
RRP40Q08285 GYP5YPL249C 2685 nt1.92□□□□□ -2.1
RRP40Q08285 STI1YOR027W 1770 nt1.91□□□□□ -2.1
RRP40Q08285 PCK1YKR097W 1650 nt1.91□□□□□ -2.1
RRP40Q08285 MIC19YFR011C 513 nt1.91□□□□□ -2.1
RRP40Q08285 IKI1YHR187W 930 nt1.91□□□□□ -2.1
RRP40Q08285 RPS30AYLR287C-A 192 nt1.91□□□□□ -2.1
RRP40Q08285 SME1YOR159C 285 nt1.91□□□□□ -2.1
RRP40Q08285 USO1YDL058W 5373 nt1.9□□□□□ -2.1
RRP40Q08285 MGM1YOR211C 2646 nt1.9□□□□□ -2.1
RRP40Q08285 SDC1YDR469W 528 nt1.9□□□□□ -2.11
RRP40Q08285 ACB1YGR037C 264 nt1.9□□□□□ -2.11
RRP40Q08285 BTN2YGR142W 1233 nt1.9□□□□□ -2.11
RRP40Q08285 SMD2YLR275W 333 nt1.9□□□□□ -2.11
Retrieved 100 of 7,029 protein–RNA pairs in 107.7 ms