RNA–Protein interactions for RNA: YNL044W

YIP3, Transcript of Protein localized to COPII vesicles, yeastyeast

Gene YIP3, Length 531 nt, Biotype protein coding, Subcellular localisation Cell cortex, Cytosol, Endoplasmic reticulum, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (RIP-Chip)
Gene Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score Detected Interaction
YIP3YNL044W MTC1P47018 478 aaKnown RBP16.93■□□□□ 0.3
YIP3YNL044W DRS1P32892 752 aaKnown RBP16.52■□□□□ 0.24
YIP3YNL044W FAP1P53971 965 aa14.47□□□□□ -0.09
YIP3YNL044W DIP2Q12220 943 aaPredicted RBP14.22□□□□□ -0.13
YIP3YNL044W BFR2Q06631 534 aaKnown RBP14.08□□□□□ -0.16
YIP3YNL044W ISW2Q08773 1120 aa13.9□□□□□ -0.18
YIP3YNL044W AVT3P36062 692 aa13.89□□□□□ -0.19
YIP3YNL044W PRI1P10363 409 aa13.87□□□□□ -0.19
YIP3YNL044W RPG1P38249 964 aaKnown RBP13.71□□□□□ -0.21
YIP3YNL044W AAD16Q02895 342 aa13.7□□□□□ -0.22
YIP3YNL044W RSE1Q04693 1361 aaKnown RBP13.57□□□□□ -0.24
YIP3YNL044W PRY3P47033 881 aa13.55□□□□□ -0.24
YIP3YNL044W TSR3Q12094 313 aaKnown RBP13.15□□□□□ -0.3
YIP3YNL044W RPL17AP05740 184 aaKnown RBP13.09□□□□□ -0.31
YIP3YNL044W RPL17BP46990 184 aaKnown RBP13.09□□□□□ -0.31
YIP3YNL044W REB1P21538 810 aa12.98□□□□□ -0.33
YIP3YNL044W TFA1P36100 482 aa12.88□□□□□ -0.35
YIP3YNL044W YCK3P39962 524 aa12.77□□□□□ -0.37
YIP3YNL044W HAA1Q12753 694 aaKnown RBP12.76□□□□□ -0.37
YIP3YNL044W MRPL32P25348 183 aa12.65□□□□□ -0.38
YIP3YNL044W SPT21P35209 758 aa12.55□□□□□ -0.4
YIP3YNL044W RIM101P33400 625 aa12.28□□□□□ -0.44
YIP3YNL044W YKR023WP36119 530 aaKnown RBP12.25□□□□□ -0.45
YIP3YNL044W CDC27P38042 758 aa12.12□□□□□ -0.47
YIP3YNL044W HOP09932 586 aa12.01□□□□□ -0.49
YIP3YNL044W TFC8Q12308 588 aa12.01□□□□□ -0.49
YIP3YNL044W DCD1P06773 312 aa11.94□□□□□ -0.5
YIP3YNL044W YGL015CP33199 130 aa11.93□□□□□ -0.5
YIP3YNL044W OXP1P28273 1286 aa11.87□□□□□ -0.51
YIP3YNL044W YIL055CP40523 627 aaKnown RBP11.74□□□□□ -0.53
YIP3YNL044W UBP10P53874 792 aaPredicted RBP11.71□□□□□ -0.53
YIP3YNL044W PTP3P40048 928 aa11.7□□□□□ -0.54
YIP3YNL044W MAP2P38174 421 aaKnown RBP11.67□□□□□ -0.54
YIP3YNL044W YAH1Q12184 172 aaKnown RBP11.65□□□□□ -0.54
YIP3YNL044W BCH2P36122 765 aa11.64□□□□□ -0.55
YIP3YNL044W SCY1P53009 804 aa11.57□□□□□ -0.56
YIP3YNL044W RSM7P47150 247 aa11.54□□□□□ -0.56
YIP3YNL044W SSP1P38871 571 aa11.52□□□□□ -0.57
YIP3YNL044W YLR271WQ06152 274 aa11.47□□□□□ -0.57
YIP3YNL044W EPS1P40557 701 aa11.42□□□□□ -0.58
YIP3YNL044W ARP8Q12386 881 aaKnown RBP RIP-Chip data11.41□□□□□ -0.58not detected
YIP3YNL044W SLX5P32828 619 aaKnown RBP11.39□□□□□ -0.59
YIP3YNL044W AI2P03876 854 aa11.38□□□□□ -0.59
YIP3YNL044W BBC1P47068 1157 aa11.37□□□□□ -0.59
YIP3YNL044W BDF1P35817 686 aa11.34□□□□□ -0.59
YIP3YNL044W TIF4632P39936 914 aaKnown RBP11.24□□□□□ -0.61
YIP3YNL044W PSD2P53037 1138 aaKnown RBP11.22□□□□□ -0.61
YIP3YNL044W MGA2P40578 1113 aa11.17□□□□□ -0.62
YIP3YNL044W TGL3P40308 642 aa11.15□□□□□ -0.62
YIP3YNL044W CST9Q06032 482 aa11.1□□□□□ -0.63
YIP3YNL044W MRM1P25270 412 aa11.01□□□□□ -0.65
YIP3YNL044W NSR1P27476 414 aaKnown RBP RIP-Chip data10.88□□□□□ -0.67not detected
YIP3YNL044W RTG3P38165 486 aa10.83□□□□□ -0.68
YIP3YNL044W YAP5P40574 245 aa10.82□□□□□ -0.68
YIP3YNL044W YOR238WQ08634 303 aa10.79□□□□□ -0.68
YIP3YNL044W RCR1P38212 213 aa10.76□□□□□ -0.69
YIP3YNL044W MST1P07236 462 aa10.75□□□□□ -0.69
YIP3YNL044W VPS29P38759 282 aa10.73□□□□□ -0.69
YIP3YNL044W YMR1P47147 688 aaKnown RBP RIP-Chip data10.7□□□□□ -0.7not detected
YIP3YNL044W PIB1Q06651 286 aa10.65□□□□□ -0.7
YIP3YNL044W DBP1P24784 617 aaKnown RBP10.63□□□□□ -0.71
YIP3YNL044W RAM2P29703 316 aa10.62□□□□□ -0.71
YIP3YNL044W UBP9P39967 754 aa10.62□□□□□ -0.71
YIP3YNL044W BUD31P25337 157 aaPredicted RBP10.61□□□□□ -0.71
YIP3YNL044W STS1P38637 319 aa10.61□□□□□ -0.71
YIP3YNL044W YFR006WP43590 535 aa10.6□□□□□ -0.71
YIP3YNL044W GTT3P39996 337 aa10.57□□□□□ -0.72
YIP3YNL044W MAK11P20484 414 aaKnown RBP10.53□□□□□ -0.72
YIP3YNL044W YBL029C-AQ3E756 94 aa10.49□□□□□ -0.73
YIP3YNL044W VMA1P17255 1071 aaKnown RBP10.47□□□□□ -0.73
YIP3YNL044W WSC3Q12215 556 aa10.45□□□□□ -0.74
YIP3YNL044W DMA1P38823 416 aa10.42□□□□□ -0.74
YIP3YNL044W RQC2Q12532 1038 aaKnown RBP10.42□□□□□ -0.74
YIP3YNL044W VNX1P42839 908 aa10.4□□□□□ -0.74
YIP3YNL044W MIF2P35201 549 aa10.39□□□□□ -0.75
YIP3YNL044W COQ8P27697 501 aa10.37□□□□□ -0.75
YIP3YNL044W SAM3Q08986 587 aa10.37□□□□□ -0.75
YIP3YNL044W YOL036WQ08206 761 aa10.35□□□□□ -0.75
YIP3YNL044W MSB4Q12317 492 aa10.34□□□□□ -0.75
YIP3YNL044W EDS1P38073 919 aa10.33□□□□□ -0.76
YIP3YNL044W SPP1Q03012 353 aa10.33□□□□□ -0.76
YIP3YNL044W SET4P42948 560 aa10.32□□□□□ -0.76
YIP3YNL044W SET1P38827 1080 aaKnown RBP10.3□□□□□ -0.76
YIP3YNL044W TIF11P38912 153 aaKnown RBP10.29□□□□□ -0.76
YIP3YNL044W PTC3P34221 468 aaKnown RBP10.28□□□□□ -0.76
YIP3YNL044W GYP5Q12344 894 aa10.27□□□□□ -0.77
YIP3YNL044W EAP1P36041 632 aaKnown RBP10.25□□□□□ -0.77
YIP3YNL044W NOP53Q12080 455 aaKnown RBP10.25□□□□□ -0.77
YIP3YNL044W GRE2Q12068 342 aaKnown RBP10.24□□□□□ -0.77
YIP3YNL044W ABP1P15891 592 aaKnown RBP10.23□□□□□ -0.77
YIP3YNL044W ULI1P43604 169 aa10.23□□□□□ -0.77
YIP3YNL044W ATH1P48016 1211 aa10.2□□□□□ -0.78
YIP3YNL044W SIS1P25294 352 aaKnown RBP10.19□□□□□ -0.78
YIP3YNL044W DCW1P36091 449 aa10.18□□□□□ -0.78
YIP3YNL044W TRP5P00931 707 aaKnown RBP10.17□□□□□ -0.78
YIP3YNL044W GUT1P32190 709 aa10.17□□□□□ -0.78
YIP3YNL044W HTA1P04911 132 aaKnown RBP10.16□□□□□ -0.78
YIP3YNL044W HTA2P04912 132 aa10.16□□□□□ -0.78
YIP3YNL044W IOC2Q12072 812 aa10.15□□□□□ -0.78
YIP3YNL044W IFH1P39520 1085 aa10.13□□□□□ -0.79
Retrieved 100 of 5,963 RNA–protein pairs in 12.8 ms