Protein–RNA interactions for Protein: Q9BRG1

VPS25, Vacuolar protein-sorting-associated protein 25, humanhuman

Predictions only

Length 176 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
VPS25Q9BRG1 C3orf18-203ENST00000426034 2486 ntAPPRIS P1 TSL 1 (best) BASIC14.48□□□□□ -0.09
VPS25Q9BRG1 SSBP3-202ENST00000357475 1533 ntTSL 1 (best) BASIC14.48□□□□□ -0.09
VPS25Q9BRG1 RHOT1-202ENST00000354266 2919 ntTSL 1 (best) BASIC14.48□□□□□ -0.09
VPS25Q9BRG1 OTUD1-201ENST00000376495 2933 ntAPPRIS P1 BASIC14.48□□□□□ -0.09
VPS25Q9BRG1 TCF3-204ENST00000453954 3585 ntTSL 5 BASIC14.48□□□□□ -0.09
VPS25Q9BRG1 HNRNPA3-204ENST00000435711 1731 ntAPPRIS P3 TSL 1 (best) BASIC14.48□□□□□ -0.09
VPS25Q9BRG1 FOLH1-201ENST00000256999 2635 ntAPPRIS P1 TSL 1 (best) BASIC14.48□□□□□ -0.09
VPS25Q9BRG1 CRACR2B-201ENST00000450448 1663 ntTSL 1 (best) BASIC14.48□□□□□ -0.09
VPS25Q9BRG1 UBE2D2-202ENST00000398733 2702 ntAPPRIS P2 TSL 1 (best) BASIC14.48□□□□□ -0.09
VPS25Q9BRG1 GIMAP1-201ENST00000307194 4420 ntAPPRIS P1 TSL 1 (best) BASIC14.48□□□□□ -0.09
VPS25Q9BRG1 FOXD4L1-201ENST00000306507 2491 ntAPPRIS P1 BASIC14.48□□□□□ -0.09
VPS25Q9BRG1 TRAF3-203ENST00000392745 2459 ntAPPRIS P1 TSL 1 (best) BASIC14.48□□□□□ -0.09
VPS25Q9BRG1 BPTF-202ENST00000321892 11292 ntAPPRIS ALT2 TSL 5 BASIC14.48□□□□□ -0.09
VPS25Q9BRG1 FBXO28-201ENST00000366862 5451 ntAPPRIS P1 TSL 1 (best) BASIC14.48□□□□□ -0.09
VPS25Q9BRG1 RBKS-201ENST00000302188 1973 ntAPPRIS P1 TSL 1 (best) BASIC14.47□□□□□ -0.09
VPS25Q9BRG1 FAM189B-210ENST00000621094 1335 ntTSL 1 (best) BASIC14.47□□□□□ -0.09
VPS25Q9BRG1 LRRC25-202ENST00000595840 1924 ntAPPRIS P1 TSL 1 (best) BASIC14.47□□□□□ -0.09
VPS25Q9BRG1 AC139713.2-201ENST00000641328 2723 ntBASIC14.47□□□□□ -0.09
VPS25Q9BRG1 ZCCHC18-203ENST00000537356 2907 ntAPPRIS P1 TSL 5 BASIC14.47□□□□□ -0.09
VPS25Q9BRG1 SCN3B-201ENST00000299333 5665 ntAPPRIS P1 TSL 1 (best) BASIC14.47□□□□□ -0.09
VPS25Q9BRG1 TTLL11-201ENST00000321582 3250 ntAPPRIS P1 TSL 5 BASIC14.47□□□□□ -0.09
VPS25Q9BRG1 CAMK2B-216ENST00000440254 2097 ntAPPRIS P4 TSL 1 (best) BASIC14.47□□□□□ -0.09
VPS25Q9BRG1 FDXR-201ENST00000293195 1875 ntAPPRIS ALT1 TSL 1 (best) BASIC14.47□□□□□ -0.09
VPS25Q9BRG1 NHS-201ENST00000380060 8761 ntAPPRIS P1 TSL 1 (best) BASIC14.47□□□□□ -0.09
VPS25Q9BRG1 PCBD2-201ENST00000254908 1223 ntAPPRIS P1 TSL 1 (best) BASIC14.47□□□□□ -0.09
VPS25Q9BRG1 AL109917.1-201ENST00000412228 906 ntTSL 2 BASIC14.47□□□□□ -0.09
VPS25Q9BRG1 OGG1-203ENST00000302036 2220 ntTSL 1 (best) BASIC14.47□□□□□ -0.09
VPS25Q9BRG1 FXR2-201ENST00000250113 2957 ntAPPRIS P1 TSL 1 (best) BASIC14.47□□□□□ -0.09
VPS25Q9BRG1 PRDM8-203ENST00000504452 3706 ntAPPRIS P1 TSL 5 BASIC14.47□□□□□ -0.09
VPS25Q9BRG1 NSMCE3-201ENST00000332303 4838 ntAPPRIS P1 BASIC14.47□□□□□ -0.09
VPS25Q9BRG1 PCMT1-205ENST00000464889 1984 ntAPPRIS P3 TSL 1 (best) BASIC14.47□□□□□ -0.09
VPS25Q9BRG1 BMP7-201ENST00000395863 4013 ntAPPRIS P1 TSL 1 (best) BASIC14.47□□□□□ -0.09
VPS25Q9BRG1 ACOT2-201ENST00000238651 1774 ntTSL 1 (best) BASIC14.47□□□□□ -0.09
VPS25Q9BRG1 MIOS-202ENST00000405785 3095 ntAPPRIS P1 TSL 5 BASIC14.47□□□□□ -0.09
VPS25Q9BRG1 NBEAL2-205ENST00000450053 8827 ntAPPRIS P1 TSL 2 BASIC14.47□□□□□ -0.09
VPS25Q9BRG1 AC104581.1-201ENST00000324348 2852 ntAPPRIS P1 TSL 2 BASIC14.47□□□□□ -0.09
VPS25Q9BRG1 TMEM203-201ENST00000343666 1557 ntAPPRIS P1 BASIC14.47□□□□□ -0.09
VPS25Q9BRG1 RUFY2-203ENST00000388768 4502 ntTSL 2 BASIC14.47□□□□□ -0.09
VPS25Q9BRG1 LHFPL2-207ENST00000515007 4680 ntAPPRIS P1 TSL 1 (best) BASIC14.47□□□□□ -0.09
VPS25Q9BRG1 B4GALT2-202ENST00000356836 2629 ntAPPRIS P1 TSL 2 BASIC14.46□□□□□ -0.09
VPS25Q9BRG1 AP006623.1-201ENST00000506172 2061 ntTSL 5 BASIC14.46□□□□□ -0.09
VPS25Q9BRG1 AP006284.1-201ENST00000527620 2210 ntTSL 2 BASIC14.46□□□□□ -0.09
VPS25Q9BRG1 ZSWIM7-201ENST00000399277 2008 ntAPPRIS P1 TSL 1 (best) BASIC14.46□□□□□ -0.09
VPS25Q9BRG1 UBAP1-204ENST00000625521 2029 ntTSL 2 BASIC14.46□□□□□ -0.09
VPS25Q9BRG1 ZBTB9-201ENST00000395064 2716 ntAPPRIS P1 TSL 1 (best) BASIC14.46□□□□□ -0.09
VPS25Q9BRG1 LYSMD4-202ENST00000344791 2885 ntTSL 1 (best) BASIC14.46□□□□□ -0.09
VPS25Q9BRG1 KRT5-201ENST00000252242 2531 ntAPPRIS P1 TSL 1 (best) BASIC14.46□□□□□ -0.09
VPS25Q9BRG1 AC007326.2-201ENST00000624224 7579 ntBASIC14.46□□□□□ -0.09
VPS25Q9BRG1 TAF15-215ENST00000605844 2191 ntAPPRIS P3 TSL 1 (best) BASIC14.46□□□□□ -0.09
VPS25Q9BRG1 PGM1-205ENST00000540265 2345 ntTSL 2 BASIC14.46□□□□□ -0.09
VPS25Q9BRG1 PTPRA-205ENST00000399903 3337 ntTSL 5 BASIC14.46□□□□□ -0.09
VPS25Q9BRG1 TMED4-205ENST00000481238 1755 ntTSL 1 (best) BASIC14.46□□□□□ -0.09
VPS25Q9BRG1 AC018470.1-201ENST00000624790 3129 ntBASIC14.46□□□□□ -0.09
VPS25Q9BRG1 LRRC56-201ENST00000270115 2769 ntAPPRIS P1 TSL 1 (best) BASIC14.46□□□□□ -0.09
VPS25Q9BRG1 AC010542.4-201ENST00000563151 1910 ntBASIC14.46□□□□□ -0.09
VPS25Q9BRG1 TMEM184A-201ENST00000297477 6276 ntAPPRIS P1 TSL 1 (best) BASIC14.46□□□□□ -0.09
VPS25Q9BRG1 CDH24-204ENST00000487137 3438 ntAPPRIS P1 TSL 5 BASIC14.46□□□□□ -0.09
VPS25Q9BRG1 LEF1-201ENST00000265165 3068 ntAPPRIS P3 TSL 1 (best) BASIC14.46□□□□□ -0.09
VPS25Q9BRG1 PPAN-202ENST00000393793 1575 ntTSL 5 BASIC14.46□□□□□ -0.09
VPS25Q9BRG1 AP3S1-201ENST00000316788 1730 ntAPPRIS P1 TSL 1 (best) BASIC14.46□□□□□ -0.1
VPS25Q9BRG1 P2RY6-208ENST00000540124 2351 ntAPPRIS P1 TSL 1 (best) BASIC14.46□□□□□ -0.1
VPS25Q9BRG1 RHOT2-201ENST00000315082 2539 ntAPPRIS P1 TSL 1 (best) BASIC14.46□□□□□ -0.1
VPS25Q9BRG1 CYTH1-209ENST00000589296 2159 ntTSL 5 BASIC14.46□□□□□ -0.1
VPS25Q9BRG1 LTBP2-201ENST00000261978 8567 ntAPPRIS P2 TSL 1 (best) BASIC14.46□□□□□ -0.1
VPS25Q9BRG1 SNRK-203ENST00000437827 1995 ntTSL 2 BASIC14.45□□□□□ -0.1
VPS25Q9BRG1 HNRNPA0-201ENST00000314940 8726 ntAPPRIS P1 BASIC14.45□□□□□ -0.1
VPS25Q9BRG1 CROCC-201ENST00000375541 6656 ntAPPRIS P1 TSL 5 BASIC14.45□□□□□ -0.1
VPS25Q9BRG1 ZBTB16-202ENST00000392996 2287 ntAPPRIS P1 TSL 1 (best) BASIC14.45□□□□□ -0.1
VPS25Q9BRG1 KLHL17-201ENST00000338591 2560 ntAPPRIS P1 TSL 1 (best) BASIC14.45□□□□□ -0.1
VPS25Q9BRG1 BICD2-201ENST00000356884 6427 ntAPPRIS ALT2 TSL 1 (best) BASIC14.45□□□□□ -0.1
VPS25Q9BRG1 ADAT3-201ENST00000329478 1620 ntAPPRIS P1 TSL 1 (best) BASIC14.45□□□□□ -0.1
VPS25Q9BRG1 GADD45GIP1-201ENST00000316939 1782 ntAPPRIS P1 TSL 1 (best) BASIC14.45□□□□□ -0.1
VPS25Q9BRG1 IQCJ-SCHIP1-203ENST00000476809 1780 ntAPPRIS ALT2 TSL 5 BASIC14.45□□□□□ -0.1
VPS25Q9BRG1 HMCES-201ENST00000383463 2515 ntAPPRIS P1 TSL 1 (best) BASIC14.45□□□□□ -0.1
VPS25Q9BRG1 NRXN1-204ENST00000401669 5870 ntAPPRIS ALT1 TSL 5 BASIC14.45□□□□□ -0.1
VPS25Q9BRG1 SRSF12-201ENST00000452027 3599 ntAPPRIS P1 TSL 1 (best) BASIC14.45□□□□□ -0.1
VPS25Q9BRG1 TMC6-202ENST00000322914 2786 ntAPPRIS P1 TSL 1 (best) BASIC14.45□□□□□ -0.1
VPS25Q9BRG1 PDE9A-206ENST00000380328 1875 ntTSL 1 (best) BASIC14.45□□□□□ -0.1
VPS25Q9BRG1 KLC2-205ENST00000394078 1557 ntTSL 5 BASIC14.45□□□□□ -0.1
VPS25Q9BRG1 NMB-202ENST00000394588 1017 ntTSL 1 (best) BASIC14.45□□□□□ -0.1
VPS25Q9BRG1 AC011511.4-201ENST00000586529 1850 ntAPPRIS P1 TSL 5 BASIC14.45□□□□□ -0.1
VPS25Q9BRG1 PSMG3-AS1-201ENST00000437621 5701 ntTSL 1 (best) BASIC14.45□□□□□ -0.1
VPS25Q9BRG1 PIF1-202ENST00000333425 2278 ntTSL 1 (best) BASIC14.45□□□□□ -0.1
VPS25Q9BRG1 SCD5-201ENST00000273908 1995 ntTSL 2 BASIC14.45□□□□□ -0.1
VPS25Q9BRG1 DOK4-218ENST00000569548 1848 ntAPPRIS P1 TSL 1 (best) BASIC14.45□□□□□ -0.1
VPS25Q9BRG1 LINC01970-201ENST00000581489 1810 ntTSL 1 (best) BASIC14.45□□□□□ -0.1
VPS25Q9BRG1 SRPK1-204ENST00000373825 4592 ntAPPRIS P1 TSL 1 (best) BASIC14.45□□□□□ -0.1
VPS25Q9BRG1 DYSF-207ENST00000409762 6727 ntAPPRIS ALT2 TSL 1 (best) BASIC14.45□□□□□ -0.1
VPS25Q9BRG1 DYSF-211ENST00000429174 6739 ntAPPRIS ALT2 TSL 1 (best) BASIC14.45□□□□□ -0.1
VPS25Q9BRG1 CCNI2-201ENST00000378731 2355 ntAPPRIS P3 TSL 1 (best) BASIC14.45□□□□□ -0.1
VPS25Q9BRG1 REPS1-208ENST00000450536 4537 ntAPPRIS ALT1 TSL 1 (best) BASIC14.45□□□□□ -0.1
VPS25Q9BRG1 DHX30-205ENST00000445061 4065 ntAPPRIS P2 TSL 1 (best) BASIC14.45□□□□□ -0.1
VPS25Q9BRG1 F11R-206ENST00000621309 4770 ntTSL 5 BASIC14.45□□□□□ -0.1
VPS25Q9BRG1 CACTIN-201ENST00000221899 2797 ntAPPRIS P1 TSL 1 (best) BASIC14.45□□□□□ -0.1
VPS25Q9BRG1 FFAR3-201ENST00000327809 1796 ntAPPRIS P1 TSL 1 (best) BASIC14.45□□□□□ -0.1
VPS25Q9BRG1 RALGAPA1-203ENST00000389698 7864 ntTSL 1 (best) BASIC14.45□□□□□ -0.1
VPS25Q9BRG1 GLG1-201ENST00000205061 8261 ntAPPRIS P3 TSL 1 (best) BASIC14.44□□□□□ -0.1
VPS25Q9BRG1 EXT1-201ENST00000378204 8270 ntAPPRIS P1 TSL 1 (best) BASIC14.44□□□□□ -0.1
VPS25Q9BRG1 C9orf50-201ENST00000372478 1620 ntAPPRIS P2 TSL 2 BASIC14.44□□□□□ -0.1
VPS25Q9BRG1 ZDHHC24-201ENST00000310442 4721 ntAPPRIS P1 TSL 1 (best) BASIC14.44□□□□□ -0.1
Retrieved 100 of 98,524 protein–RNA pairs in 59.9 ms