RNA–Protein interactions for RNA: ENST00000375541.9

CROCC-201, Transcript of ciliary rootlet coiled-coil, rootletin, humanhuman

APPRIS P1 TSL 5 BASIC

Gene CROCC, Length 6,656 nt, Biotype protein coding.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CROCC-201ENST00000375541 DCAF8L2P0C7V8 631 aa27.29■■□□□ 1.96
CROCC-201ENST00000375541 EHMT2Q96KQ7 1210 aa25.96■■□□□ 1.75
CROCC-201ENST00000375541 SUPT5HO00267 1087 aaKnown RBP25.75■■□□□ 1.71
CROCC-201ENST00000375541 SHROOM4Q9ULL8 1493 aa25.31■■□□□ 1.64
CROCC-201ENST00000375541 NISCHQ9Y2I1 1504 aa25.2■■□□□ 1.62
CROCC-201ENST00000375541 TTBK1Q5TCY1 1321 aaPredicted RBP24.98■■□□□ 1.59
CROCC-201ENST00000375541 PELP1Q8IZL8 1130 aaKnown RBP24.78■■□□□ 1.56
CROCC-201ENST00000375541 FAM9AQ8IZU1 332 aaPredicted RBP24.59■■□□□ 1.53
CROCC-201ENST00000375541 ERICH6Q7L0X2 663 aa24.53■■□□□ 1.52
CROCC-201ENST00000375541 RANGAP1P46060 587 aaPredicted RBP24.51■■□□□ 1.51
CROCC-201ENST00000375541 MYT1Q01538 1121 aa24.35■■□□□ 1.49
CROCC-201ENST00000375541 APLP2Q06481 763 aa24.24■■□□□ 1.47
CROCC-201ENST00000375541 PCGF6Q9BYE7 350 aa24.23■■□□□ 1.47
CROCC-201ENST00000375541 YTHDC1Q96MU7 727 aaKnown RBP24.11■■□□□ 1.45
CROCC-201ENST00000375541 ATP1B4Q9UN42 357 aaPredicted RBP24.05■■□□□ 1.44
CROCC-201ENST00000375541 PPARGC1BQ86YN6 1023 aaKnown RBP23.82■■□□□ 1.4
CROCC-201ENST00000375541 CCER1Q8TC90 406 aaPredicted RBP23.71■■□□□ 1.39
CROCC-201ENST00000375541 CENPBP07199 599 aaPredicted RBP23.69■■□□□ 1.38
CROCC-201ENST00000375541 CNGB1Q14028 1251 aaPredicted RBP23.46■■□□□ 1.35
CROCC-201ENST00000375541 UBTFP17480 764 aaKnown RBP23.4■■□□□ 1.34
CROCC-201ENST00000375541 TRIM41Q8WV44 630 aa23.4■■□□□ 1.34
CROCC-201ENST00000375541 NEFLP07196 543 aa23.4■■□□□ 1.34
CROCC-201ENST00000375541 MYT1LQ9UL68 1186 aa23.34■■□□□ 1.33
CROCC-201ENST00000375541 CHIC1Q5VXU3 224 aa23.32■■□□□ 1.32
CROCC-201ENST00000375541 POLR3GLQ9BT43 218 aa23.28■■□□□ 1.32
CROCC-201ENST00000375541 ITGAEP38570 1179 aa23.21■■□□□ 1.31
CROCC-201ENST00000375541 DAXXQ9UER7 740 aaPredicted RBP23.1■■□□□ 1.29
CROCC-201ENST00000375541 ZEB1P37275 1124 aaPredicted RBP22.96■■□□□ 1.27
CROCC-201ENST00000375541 HNRNPUL2-BSCL2H3BQZ7 746 aaPredicted RBP22.91■■□□□ 1.26
CROCC-201ENST00000375541 HNRNPUL2Q1KMD3 747 aaKnown RBP22.91■■□□□ 1.26
CROCC-201ENST00000375541 ABCC9O60706 1549 aa22.9■■□□□ 1.26
CROCC-201ENST00000375541 SLC4A1APQ9BWU0 796 aaKnown RBP22.82■■□□□ 1.24
CROCC-201ENST00000375541 LOC105371045A0A1W2PR82 267 aa22.79■■□□□ 1.24
CROCC-201ENST00000375541 PABPN1Q86U42 306 aaKnown RBP eCLIP22.76■■□□□ 1.23
CROCC-201ENST00000375541 BCL11AQ9H165 835 aa22.67■■□□□ 1.22
CROCC-201ENST00000375541 BCANQ96GW7 911 aa22.66■■□□□ 1.22
CROCC-201ENST00000375541 ZNF316A6NFI3 1004 aaPredicted RBP22.64■■□□□ 1.21
CROCC-201ENST00000375541 HRCP23327 699 aa22.58■■□□□ 1.2
CROCC-201ENST00000375541 CLSPNQ9HAW4 1339 aa22.57■■□□□ 1.2
CROCC-201ENST00000375541 TRIM26Q12899 539 aaPredicted RBP22.51■■□□□ 1.19
CROCC-201ENST00000375541 RTL5Q5HYW3 569 aaPredicted RBP22.51■■□□□ 1.19
CROCC-201ENST00000375541 SLC24A1O60721 1099 aa22.32■■□□□ 1.16
CROCC-201ENST00000375541 NEUROD1Q13562 356 aa22.27■■□□□ 1.16
CROCC-201ENST00000375541 FAM50AQ14320 339 aaKnown RBP22.24■■□□□ 1.15
CROCC-201ENST00000375541 FBLN2P98095 1184 aa22.2■■□□□ 1.14
CROCC-201ENST00000375541 ZNF326Q5BKZ1 582 aaKnown RBP22.18■■□□□ 1.14
CROCC-201ENST00000375541 DIEXFQ68CQ4 756 aaKnown RBP22.14■■□□□ 1.13
CROCC-201ENST00000375541 TRIM52Q96A61 297 aa22.14■■□□□ 1.13
CROCC-201ENST00000375541 GTF3C3Q9Y5Q9 886 aa22.1■■□□□ 1.13
CROCC-201ENST00000375541 PLPPR3Q6T4P5 718 aa22.08■■□□□ 1.13
CROCC-201ENST00000375541 EIF5BO60841 1220 aaKnown RBP22.05■■□□□ 1.12
CROCC-201ENST00000375541 ARID3CA6NKF2 412 aa22.04■■□□□ 1.12
CROCC-201ENST00000375541 NPM2Q86SE8 214 aaKnown RBP22.02■■□□□ 1.11
CROCC-201ENST00000375541 ARXQ96QS3 562 aa21.86■■□□□ 1.09
CROCC-201ENST00000375541 CDK11AQ9UQ88 783 aaPredicted RBP21.83■■□□□ 1.09
CROCC-201ENST00000375541 CANXP27824 592 aaKnown RBP21.79■■□□□ 1.08
CROCC-201ENST00000375541 P3H3Q8IVL6 736 aa21.78■■□□□ 1.08
CROCC-201ENST00000375541 ZBTB47Q9UFB7 747 aaPredicted RBP21.75■■□□□ 1.07
CROCC-201ENST00000375541 NBR1Q14596 966 aa21.65■■□□□ 1.06
CROCC-201ENST00000375541 ANP32CO43423 234 aa21.64■■□□□ 1.06
CROCC-201ENST00000375541 SENP3Q9H4L4 574 aaPredicted RBP21.59■■□□□ 1.05
CROCC-201ENST00000375541 SALL2Q9Y467 1007 aaPredicted RBP21.58■■□□□ 1.04
CROCC-201ENST00000375541 A0A0G2JS52 829 aa21.57■■□□□ 1.04
CROCC-201ENST00000375541 ZNF777Q9ULD5 760 aaPredicted RBP21.55■■□□□ 1.04
CROCC-201ENST00000375541 ANP32AP39687 249 aaKnown RBP21.49■■□□□ 1.03
CROCC-201ENST00000375541 SCAF1Q9H7N4 1312 aaKnown RBP21.46■■□□□ 1.03
CROCC-201ENST00000375541 PLEKHG5O94827 1062 aa21.44■■□□□ 1.02
CROCC-201ENST00000375541 SCRIBQ14160 1630 aa21.42■■□□□ 1.02
CROCC-201ENST00000375541 NPM1P06748 294 aaKnown RBP eCLIP21.41■■□□□ 1.02
CROCC-201ENST00000375541 FKBP8Q14318 412 aa21.41■■□□□ 1.02
CROCC-201ENST00000375541 CHGAP10645 457 aaKnown RBP21.39■■□□□ 1.01
CROCC-201ENST00000375541 HSP90AA1P07900 732 aaKnown RBP21.38■■□□□ 1.01
CROCC-201ENST00000375541 ESF1Q9H501 851 aaKnown RBP21.37■■□□□ 1.01
CROCC-201ENST00000375541 SENP3-EIF4A1A0A087X0R7 540 aa21.36■■□□□ 1.01
CROCC-201ENST00000375541 NEFMP07197 916 aa21.31■■□□□ 1
CROCC-201ENST00000375541 IRX6P78412 446 aaPredicted RBP21.3■■□□□ 1
CROCC-201ENST00000375541 TPRNQ4KMQ1 711 aa21.3■■□□□ 1
CROCC-201ENST00000375541 FAM9BQ8IZU0 186 aa21.29■■□□□ 1
CROCC-201ENST00000375541 ACIN1Q9UKV3 1341 aaKnown RBP21.27■■□□□ 1
CROCC-201ENST00000375541 ANP32BQ92688 251 aaKnown RBP21.27■■□□□ 1
CROCC-201ENST00000375541 STAG3Q9UJ98 1225 aa21.24■□□□□ 0.99
CROCC-201ENST00000375541 HIRIP3Q9BW71 556 aaPredicted RBP21.23■□□□□ 0.99
CROCC-201ENST00000375541 DDX10Q13206 875 aaKnown RBP21.17■□□□□ 0.98
CROCC-201ENST00000375541 TULP1O00294 542 aaPredicted RBP21.17■□□□□ 0.98
CROCC-201ENST00000375541 CSRNP3Q8WYN3 585 aa21.16■□□□□ 0.98
CROCC-201ENST00000375541 ZBTB7CA1YPR0 619 aa21.15■□□□□ 0.98
CROCC-201ENST00000375541 GRWD1Q9BQ67 446 aaKnown RBP eCLIP21.15■□□□□ 0.98
CROCC-201ENST00000375541 HNRNPUQ00839 825 aaKnown RBP eCLIP21.14■□□□□ 0.98
CROCC-201ENST00000375541 CHIC2Q9UKJ5 165 aa21.14■□□□□ 0.97
CROCC-201ENST00000375541 AMER1Q5JTC6 1135 aaPredicted RBP21.13■□□□□ 0.97
CROCC-201ENST00000375541 RTN4Q9NQC3 1192 aaKnown RBP21.12■□□□□ 0.97
CROCC-201ENST00000375541 GLIPR1L2Q4G1C9 344 aa21.08■□□□□ 0.97
CROCC-201ENST00000375541 CHMP7Q8WUX9 453 aaPredicted RBP21.08■□□□□ 0.96
CROCC-201ENST00000375541 KDM2AQ9Y2K7 1162 aa21.07■□□□□ 0.96
CROCC-201ENST00000375541 NCBP3Q53F19 620 aaKnown RBP21.06■□□□□ 0.96
CROCC-201ENST00000375541 RB1CC1Q8TDY2 1594 aa21.06■□□□□ 0.96
CROCC-201ENST00000375541 TAOK2Q9UL54 1235 aa21.02■□□□□ 0.96
CROCC-201ENST00000375541 ERCC6Q03468 1493 aa20.98■□□□□ 0.95
CROCC-201ENST00000375541 UPF2Q9HAU5 1272 aaKnown RBP20.94■□□□□ 0.94
CROCC-201ENST00000375541 TRHP20396 242 aaPredicted RBP20.93■□□□□ 0.94
Retrieved 100 of 20,778 RNA–protein pairs in 15.4 ms