RNA–Protein interactions for RNA: ENST00000378204.6

EXT1-201, Transcript of exostosin glycosyltransferase 1, humanhuman

APPRIS P1 TSL 1 (best) BASIC

Gene EXT1, Length 8,270 nt, Biotype protein coding, Subcellular localisation Cytoplasm, Endoplasmic reticulum, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
EXT1-201ENST00000378204 DCAF8L2P0C7V8 631 aa25.36■■□□□ 1.65
EXT1-201ENST00000378204 MYT1Q01538 1121 aa24.54■■□□□ 1.52
EXT1-201ENST00000378204 PELP1Q8IZL8 1130 aaKnown RBP24.36■■□□□ 1.49
EXT1-201ENST00000378204 SUPT5HO00267 1087 aaKnown RBP24.1■■□□□ 1.45
EXT1-201ENST00000378204 NISCHQ9Y2I1 1504 aa23.75■■□□□ 1.39
EXT1-201ENST00000378204 SHROOM4Q9ULL8 1493 aa23.52■■□□□ 1.36
EXT1-201ENST00000378204 EHMT2Q96KQ7 1210 aa23.39■■□□□ 1.33
EXT1-201ENST00000378204 APLP2Q06481 763 aa23.29■■□□□ 1.32
EXT1-201ENST00000378204 ERICH6Q7L0X2 663 aa23.23■■□□□ 1.31
EXT1-201ENST00000378204 CCER1Q8TC90 406 aaPredicted RBP23.11■■□□□ 1.29
EXT1-201ENST00000378204 FAM9AQ8IZU1 332 aaPredicted RBP22.98■■□□□ 1.27
EXT1-201ENST00000378204 TTBK1Q5TCY1 1321 aaPredicted RBP22.94■■□□□ 1.26
EXT1-201ENST00000378204 CENPBP07199 599 aaPredicted RBP22.9■■□□□ 1.26
EXT1-201ENST00000378204 PCGF6Q9BYE7 350 aa22.71■■□□□ 1.23
EXT1-201ENST00000378204 ZEB1P37275 1124 aaPredicted RBP22.58■■□□□ 1.21
EXT1-201ENST00000378204 YTHDC1Q96MU7 727 aaKnown RBP22.5■■□□□ 1.19
EXT1-201ENST00000378204 RANGAP1P46060 587 aaPredicted RBP22.38■■□□□ 1.17
EXT1-201ENST00000378204 TRIM41Q8WV44 630 aa22.38■■□□□ 1.17
EXT1-201ENST00000378204 ATP1B4Q9UN42 357 aaPredicted RBP22.34■■□□□ 1.17
EXT1-201ENST00000378204 NEFLP07196 543 aa22.23■■□□□ 1.15
EXT1-201ENST00000378204 UBTFP17480 764 aaKnown RBP22.22■■□□□ 1.15
EXT1-201ENST00000378204 TRIM26Q12899 539 aaPredicted RBP21.75■■□□□ 1.07
EXT1-201ENST00000378204 DAXXQ9UER7 740 aaPredicted RBP21.72■■□□□ 1.07
EXT1-201ENST00000378204 PPARGC1BQ86YN6 1023 aaKnown RBP21.7■■□□□ 1.06
EXT1-201ENST00000378204 RTL5Q5HYW3 569 aaPredicted RBP21.67■■□□□ 1.06
EXT1-201ENST00000378204 MYT1LQ9UL68 1186 aa21.53■■□□□ 1.04
EXT1-201ENST00000378204 ITGAEP38570 1179 aa21.51■■□□□ 1.03
EXT1-201ENST00000378204 POLR3GLQ9BT43 218 aa21.51■■□□□ 1.03
EXT1-201ENST00000378204 HNRNPUL2-BSCL2H3BQZ7 746 aaPredicted RBP21.49■■□□□ 1.03
EXT1-201ENST00000378204 HNRNPUL2Q1KMD3 747 aaKnown RBP21.49■■□□□ 1.03
EXT1-201ENST00000378204 HRCP23327 699 aa21.48■■□□□ 1.03
EXT1-201ENST00000378204 GLIPR1L2Q4G1C9 344 aa21.46■■□□□ 1.03
EXT1-201ENST00000378204 LOC105371045A0A1W2PR82 267 aa21.25■□□□□ 0.99
EXT1-201ENST00000378204 CNGB1Q14028 1251 aaPredicted RBP21.23■□□□□ 0.99
EXT1-201ENST00000378204 SLC4A1APQ9BWU0 796 aaKnown RBP21.18■□□□□ 0.98
EXT1-201ENST00000378204 ZNF316A6NFI3 1004 aaPredicted RBP21.15■□□□□ 0.98
EXT1-201ENST00000378204 CHIC1Q5VXU3 224 aa21.14■□□□□ 0.97
EXT1-201ENST00000378204 CLSPNQ9HAW4 1339 aa21.14■□□□□ 0.97
EXT1-201ENST00000378204 DIEXFQ68CQ4 756 aaKnown RBP21.1■□□□□ 0.97
EXT1-201ENST00000378204 EIF5BO60841 1220 aaKnown RBP21.09■□□□□ 0.97
EXT1-201ENST00000378204 FAM50AQ14320 339 aaKnown RBP20.97■□□□□ 0.95
EXT1-201ENST00000378204 TRIM52Q96A61 297 aa20.88■□□□□ 0.93
EXT1-201ENST00000378204 GTF3C3Q9Y5Q9 886 aa20.82■□□□□ 0.92
EXT1-201ENST00000378204 NEUROD1Q13562 356 aa20.8■□□□□ 0.92
EXT1-201ENST00000378204 ANP32CO43423 234 aa20.78■□□□□ 0.92
EXT1-201ENST00000378204 ZBTB47Q9UFB7 747 aaPredicted RBP20.77■□□□□ 0.92
EXT1-201ENST00000378204 CDK11AQ9UQ88 783 aaPredicted RBP20.72■□□□□ 0.91
EXT1-201ENST00000378204 ZNF326Q5BKZ1 582 aaKnown RBP20.64■□□□□ 0.89
EXT1-201ENST00000378204 BCANQ96GW7 911 aa20.62■□□□□ 0.89
EXT1-201ENST00000378204 CANXP27824 592 aaKnown RBP20.56■□□□□ 0.88
EXT1-201ENST00000378204 NEFMP07197 916 aa20.55■□□□□ 0.88
EXT1-201ENST00000378204 PABPN1Q86U42 306 aaKnown RBP eCLIP20.5■□□□□ 0.87
EXT1-201ENST00000378204 SLC24A1O60721 1099 aa20.5■□□□□ 0.87
EXT1-201ENST00000378204 ANP32AP39687 249 aaKnown RBP20.49■□□□□ 0.87
EXT1-201ENST00000378204 ABCC9O60706 1549 aa20.48■□□□□ 0.87
EXT1-201ENST00000378204 ACIN1Q9UKV3 1341 aaKnown RBP20.46■□□□□ 0.87
EXT1-201ENST00000378204 FBLN2P98095 1184 aa20.45■□□□□ 0.86
EXT1-201ENST00000378204 ANP32BQ92688 251 aaKnown RBP20.44■□□□□ 0.86
EXT1-201ENST00000378204 BCL11AQ9H165 835 aa20.4■□□□□ 0.86
EXT1-201ENST00000378204 TNNT2P45379 298 aaPredicted RBP20.37■□□□□ 0.85
EXT1-201ENST00000378204 P3H3Q8IVL6 736 aa20.25■□□□□ 0.83
EXT1-201ENST00000378204 CSRNP3Q8WYN3 585 aa20.23■□□□□ 0.83
EXT1-201ENST00000378204 ZNF777Q9ULD5 760 aaPredicted RBP20.2■□□□□ 0.82
EXT1-201ENST00000378204 HSP90AA1P07900 732 aaKnown RBP20.18■□□□□ 0.82
EXT1-201ENST00000378204 NPM2Q86SE8 214 aaKnown RBP20.18■□□□□ 0.82
EXT1-201ENST00000378204 ARID3CA6NKF2 412 aa20.18■□□□□ 0.82
EXT1-201ENST00000378204 UPF2Q9HAU5 1272 aaKnown RBP20.16■□□□□ 0.82
EXT1-201ENST00000378204 TONSLQ96HA7 1378 aa20.16■□□□□ 0.82
EXT1-201ENST00000378204 ESF1Q9H501 851 aaKnown RBP20.12■□□□□ 0.81
EXT1-201ENST00000378204 CDK11BP21127 795 aaKnown RBP20.1■□□□□ 0.81
EXT1-201ENST00000378204 ANP32EQ9BTT0 268 aa20.1■□□□□ 0.81
EXT1-201ENST00000378204 FKBP8Q14318 412 aa20.08■□□□□ 0.8
EXT1-201ENST00000378204 HNRNPUQ00839 825 aaKnown RBP eCLIP20.06■□□□□ 0.8
EXT1-201ENST00000378204 NCLP19338 710 aaKnown RBP20.05■□□□□ 0.8
EXT1-201ENST00000378204 STAG3Q9UJ98 1225 aa20.04■□□□□ 0.8
EXT1-201ENST00000378204 TRIM44Q96DX7 344 aaPredicted RBP20.03■□□□□ 0.8
EXT1-201ENST00000378204 NBR1Q14596 966 aa20.01■□□□□ 0.79
EXT1-201ENST00000378204 CHGAP10645 457 aaKnown RBP20■□□□□ 0.79
EXT1-201ENST00000378204 FAM9BQ8IZU0 186 aa19.99■□□□□ 0.79
EXT1-201ENST00000378204 TMC1Q8TDI8 760 aa19.97■□□□□ 0.79
EXT1-201ENST00000378204 DDX10Q13206 875 aaKnown RBP19.97■□□□□ 0.79
EXT1-201ENST00000378204 GOLGA6L2Q8N9W4 650 aaPredicted RBP19.96■□□□□ 0.79
EXT1-201ENST00000378204 ERICH6BQ5W0A0 696 aa19.93■□□□□ 0.78
EXT1-201ENST00000378204 CCDC136Q96JN2 1154 aa19.92■□□□□ 0.78
EXT1-201ENST00000378204 SCRIBQ14160 1630 aa19.92■□□□□ 0.78
EXT1-201ENST00000378204 DCAF1Q9Y4B6 1507 aa19.91■□□□□ 0.78
EXT1-201ENST00000378204 SALL2Q9Y467 1007 aaPredicted RBP19.9■□□□□ 0.78
EXT1-201ENST00000378204 NPM1P06748 294 aaKnown RBP eCLIP19.89■□□□□ 0.77
EXT1-201ENST00000378204 WDR43Q15061 677 aaKnown RBP eCLIP19.87■□□□□ 0.77
EXT1-201ENST00000378204 SCAF1Q9H7N4 1312 aaKnown RBP19.83■□□□□ 0.76
EXT1-201ENST00000378204 GRWD1Q9BQ67 446 aaKnown RBP eCLIP19.8■□□□□ 0.76
EXT1-201ENST00000378204 TSPY4P0CV99 314 aa19.78■□□□□ 0.76
EXT1-201ENST00000378204 TSPY10P0CW01 314 aa19.78■□□□□ 0.76
EXT1-201ENST00000378204 MRS2Q9HD23 443 aa19.77■□□□□ 0.76
EXT1-201ENST00000378204 CHIC2Q9UKJ5 165 aa19.77■□□□□ 0.76
EXT1-201ENST00000378204 MYH16Q9H6N6 1097 aa19.75■□□□□ 0.75
EXT1-201ENST00000378204 PLPPR3Q6T4P5 718 aa19.74■□□□□ 0.75
EXT1-201ENST00000378204 MTUS2Q5JR59 1369 aa19.73■□□□□ 0.75
EXT1-201ENST00000378204 NAP1L5Q96NT1 182 aaPredicted RBP19.73■□□□□ 0.75
EXT1-201ENST00000378204 KDM2AQ9Y2K7 1162 aa19.72■□□□□ 0.75
Retrieved 100 of 20,778 RNA–protein pairs in 48.1 ms