RNA–Protein interactions for RNA: ENST00000332303.5

NSMCE3-201, Transcript of NSE3 homolog, SMC5-SMC6 complex component, humanhuman

APPRIS P1 BASIC

Gene NSMCE3, Length 4,838 nt, Biotype protein coding, Subcellular localisation Cytoplasm, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
NSMCE3-201ENST00000332303 DCAF8L2P0C7V8 631 aa28.76■■■□□ 2.19
NSMCE3-201ENST00000332303 SUPT5HO00267 1087 aaKnown RBP27.33■■□□□ 1.97
NSMCE3-201ENST00000332303 NISCHQ9Y2I1 1504 aa27.25■■□□□ 1.95
NSMCE3-201ENST00000332303 SHROOM4Q9ULL8 1493 aa26.71■■□□□ 1.87
NSMCE3-201ENST00000332303 EHMT2Q96KQ7 1210 aa26.33■■□□□ 1.81
NSMCE3-201ENST00000332303 APLP2Q06481 763 aa26.11■■□□□ 1.77
NSMCE3-201ENST00000332303 PELP1Q8IZL8 1130 aaKnown RBP26.04■■□□□ 1.76
NSMCE3-201ENST00000332303 FAM9AQ8IZU1 332 aaPredicted RBP25.78■■□□□ 1.72
NSMCE3-201ENST00000332303 PCGF6Q9BYE7 350 aa25.52■■□□□ 1.68
NSMCE3-201ENST00000332303 TTBK1Q5TCY1 1321 aaPredicted RBP25.47■■□□□ 1.67
NSMCE3-201ENST00000332303 TRIM41Q8WV44 630 aa25.36■■□□□ 1.65
NSMCE3-201ENST00000332303 ZEB1P37275 1124 aaPredicted RBP25.25■■□□□ 1.63
NSMCE3-201ENST00000332303 RANGAP1P46060 587 aaPredicted RBP25.23■■□□□ 1.63
NSMCE3-201ENST00000332303 CENPBP07199 599 aaPredicted RBP25.16■■□□□ 1.62
NSMCE3-201ENST00000332303 CCER1Q8TC90 406 aaPredicted RBP25.15■■□□□ 1.62
NSMCE3-201ENST00000332303 UBTFP17480 764 aaKnown RBP25.09■■□□□ 1.61
NSMCE3-201ENST00000332303 ATP1B4Q9UN42 357 aaPredicted RBP25.08■■□□□ 1.6
NSMCE3-201ENST00000332303 ERICH6Q7L0X2 663 aa24.84■■□□□ 1.57
NSMCE3-201ENST00000332303 NEFLP07196 543 aa24.65■■□□□ 1.54
NSMCE3-201ENST00000332303 PPARGC1BQ86YN6 1023 aaKnown RBP24.5■■□□□ 1.51
NSMCE3-201ENST00000332303 TRIM26Q12899 539 aaPredicted RBP24.5■■□□□ 1.51
NSMCE3-201ENST00000332303 YTHDC1Q96MU7 727 aaKnown RBP24.47■■□□□ 1.51
NSMCE3-201ENST00000332303 ITGAEP38570 1179 aa24.24■■□□□ 1.47
NSMCE3-201ENST00000332303 HNRNPUL2-BSCL2H3BQZ7 746 aaPredicted RBP24.23■■□□□ 1.47
NSMCE3-201ENST00000332303 HNRNPUL2Q1KMD3 747 aaKnown RBP24.23■■□□□ 1.47
NSMCE3-201ENST00000332303 CHIC1Q5VXU3 224 aa24.22■■□□□ 1.47
NSMCE3-201ENST00000332303 HRCP23327 699 aa24.17■■□□□ 1.46
NSMCE3-201ENST00000332303 LOC105371045A0A1W2PR82 267 aa24.17■■□□□ 1.46
NSMCE3-201ENST00000332303 MYT1LQ9UL68 1186 aa24.13■■□□□ 1.45
NSMCE3-201ENST00000332303 MYT1Q01538 1121 aa24.08■■□□□ 1.45
NSMCE3-201ENST00000332303 POLR3GLQ9BT43 218 aa24.05■■□□□ 1.44
NSMCE3-201ENST00000332303 DAXXQ9UER7 740 aaPredicted RBP23.9■■□□□ 1.42
NSMCE3-201ENST00000332303 CNGB1Q14028 1251 aaPredicted RBP23.76■■□□□ 1.39
NSMCE3-201ENST00000332303 FAM50AQ14320 339 aaKnown RBP23.63■■□□□ 1.37
NSMCE3-201ENST00000332303 DIEXFQ68CQ4 756 aaKnown RBP23.63■■□□□ 1.37
NSMCE3-201ENST00000332303 SLC4A1APQ9BWU0 796 aaKnown RBP23.59■■□□□ 1.37
NSMCE3-201ENST00000332303 PABPN1Q86U42 306 aaKnown RBP eCLIP23.57■■□□□ 1.36
NSMCE3-201ENST00000332303 TRIM52Q96A61 297 aa23.53■■□□□ 1.36
NSMCE3-201ENST00000332303 ABCC9O60706 1549 aa23.52■■□□□ 1.36
NSMCE3-201ENST00000332303 CLSPNQ9HAW4 1339 aa23.43■■□□□ 1.34
NSMCE3-201ENST00000332303 NEUROD1Q13562 356 aa23.4■■□□□ 1.34
NSMCE3-201ENST00000332303 RTL5Q5HYW3 569 aaPredicted RBP23.32■■□□□ 1.32
NSMCE3-201ENST00000332303 ZNF316A6NFI3 1004 aaPredicted RBP23.3■■□□□ 1.32
NSMCE3-201ENST00000332303 ANP32CO43423 234 aa23.25■■□□□ 1.31
NSMCE3-201ENST00000332303 ZNF326Q5BKZ1 582 aaKnown RBP23.23■■□□□ 1.31
NSMCE3-201ENST00000332303 FBLN2P98095 1184 aa23.2■■□□□ 1.31
NSMCE3-201ENST00000332303 CSRNP3Q8WYN3 585 aa23.17■■□□□ 1.3
NSMCE3-201ENST00000332303 BCANQ96GW7 911 aa23.06■■□□□ 1.28
NSMCE3-201ENST00000332303 GTF3C3Q9Y5Q9 886 aa23.05■■□□□ 1.28
NSMCE3-201ENST00000332303 ZBTB47Q9UFB7 747 aaPredicted RBP23.03■■□□□ 1.28
NSMCE3-201ENST00000332303 P3H3Q8IVL6 736 aa23.03■■□□□ 1.28
NSMCE3-201ENST00000332303 CDK11AQ9UQ88 783 aaPredicted RBP23■■□□□ 1.27
NSMCE3-201ENST00000332303 ARID3CA6NKF2 412 aa22.92■■□□□ 1.26
NSMCE3-201ENST00000332303 NEFMP07197 916 aa22.91■■□□□ 1.26
NSMCE3-201ENST00000332303 CANXP27824 592 aaKnown RBP22.87■■□□□ 1.25
NSMCE3-201ENST00000332303 ZNF777Q9ULD5 760 aaPredicted RBP22.86■■□□□ 1.25
NSMCE3-201ENST00000332303 SLC24A1O60721 1099 aa22.76■■□□□ 1.23
NSMCE3-201ENST00000332303 ACIN1Q9UKV3 1341 aaKnown RBP22.75■■□□□ 1.23
NSMCE3-201ENST00000332303 TONSLQ96HA7 1378 aa22.7■■□□□ 1.22
NSMCE3-201ENST00000332303 BCL11AQ9H165 835 aa22.67■■□□□ 1.22
NSMCE3-201ENST00000332303 SCRIBQ14160 1630 aa22.65■■□□□ 1.22
NSMCE3-201ENST00000332303 ANP32AP39687 249 aaKnown RBP22.64■■□□□ 1.21
NSMCE3-201ENST00000332303 ESF1Q9H501 851 aaKnown RBP22.63■■□□□ 1.21
NSMCE3-201ENST00000332303 CHGAP10645 457 aaKnown RBP22.55■■□□□ 1.2
NSMCE3-201ENST00000332303 NPM1P06748 294 aaKnown RBP eCLIP22.53■■□□□ 1.2
NSMCE3-201ENST00000332303 STAG3Q9UJ98 1225 aa22.52■■□□□ 1.2
NSMCE3-201ENST00000332303 HNRNPUQ00839 825 aaKnown RBP eCLIP22.51■■□□□ 1.19
NSMCE3-201ENST00000332303 DDX10Q13206 875 aaKnown RBP22.51■■□□□ 1.19
NSMCE3-201ENST00000332303 DCAF1Q9Y4B6 1507 aa22.5■■□□□ 1.19
NSMCE3-201ENST00000332303 ZCCHC6Q5VYS8 1495 aaKnown RBP22.49■■□□□ 1.19
NSMCE3-201ENST00000332303 FKBP8Q14318 412 aa22.47■■□□□ 1.19
NSMCE3-201ENST00000332303 NPM2Q86SE8 214 aaKnown RBP22.44■■□□□ 1.18
NSMCE3-201ENST00000332303 FAM9BQ8IZU0 186 aa22.44■■□□□ 1.18
NSMCE3-201ENST00000332303 CHIC2Q9UKJ5 165 aa22.44■■□□□ 1.18
NSMCE3-201ENST00000332303 TSPY4P0CV99 314 aa22.43■■□□□ 1.18
NSMCE3-201ENST00000332303 TSPY10P0CW01 314 aa22.43■■□□□ 1.18
NSMCE3-201ENST00000332303 TMC1Q8TDI8 760 aa22.39■■□□□ 1.18
NSMCE3-201ENST00000332303 MTUS2Q5JR59 1369 aa22.37■■□□□ 1.17
NSMCE3-201ENST00000332303 UPF2Q9HAU5 1272 aaKnown RBP22.36■■□□□ 1.17
NSMCE3-201ENST00000332303 GRWD1Q9BQ67 446 aaKnown RBP eCLIP22.36■■□□□ 1.17
NSMCE3-201ENST00000332303 HSP90AA1P07900 732 aaKnown RBP22.33■■□□□ 1.17
NSMCE3-201ENST00000332303 SALL2Q9Y467 1007 aaPredicted RBP22.31■■□□□ 1.16
NSMCE3-201ENST00000332303 GOLGA6L2Q8N9W4 650 aaPredicted RBP22.29■■□□□ 1.16
NSMCE3-201ENST00000332303 MRS2Q9HD23 443 aa22.27■■□□□ 1.16
NSMCE3-201ENST00000332303 ANP32BQ92688 251 aaKnown RBP22.27■■□□□ 1.15
NSMCE3-201ENST00000332303 CCDC136Q96JN2 1154 aa22.27■■□□□ 1.15
NSMCE3-201ENST00000332303 CLIP1P30622 1438 aa22.26■■□□□ 1.15
NSMCE3-201ENST00000332303 CHMP7Q8WUX9 453 aaPredicted RBP22.25■■□□□ 1.15
NSMCE3-201ENST00000332303 WDR43Q15061 677 aaKnown RBP eCLIP22.25■■□□□ 1.15
NSMCE3-201ENST00000332303 KDM2AQ9Y2K7 1162 aa22.24■■□□□ 1.15
NSMCE3-201ENST00000332303 PLPPR3Q6T4P5 718 aa22.2■■□□□ 1.14
NSMCE3-201ENST00000332303 EIF4G2P78344 907 aaKnown RBP eCLIP22.18■■□□□ 1.14
NSMCE3-201ENST00000332303 EEA1Q15075 1411 aa22.15■■□□□ 1.14
NSMCE3-201ENST00000332303 RRP7BPQ9NSQ0 103 aa22.11■■□□□ 1.13
NSMCE3-201ENST00000332303 MIER1Q8N108 512 aa22.09■■□□□ 1.13
NSMCE3-201ENST00000332303 RSF1Q96T23 1441 aaPredicted RBP22.09■■□□□ 1.13
NSMCE3-201ENST00000332303 PLEKHD1A6NEE1 506 aa22.08■■□□□ 1.13
NSMCE3-201ENST00000332303 HIRIP3Q9BW71 556 aaPredicted RBP22.06■■□□□ 1.12
NSMCE3-201ENST00000332303 GOLGA3Q08378 1498 aa22.03■■□□□ 1.12
NSMCE3-201ENST00000332303 CEP162Q5TB80 1403 aa22■■□□□ 1.11
Retrieved 100 of 20,778 RNA–protein pairs in 71.3 ms