RNA–Protein interactions for RNA: ENST00000250113.11

FXR2-201, Transcript of FMR1 autosomal homolog 2, humanhuman

APPRIS P1 TSL 1 (best) BASIC

Gene FXR2, Length 2,957 nt, Biotype protein coding, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
FXR2-201ENST00000250113 NISCHQ9Y2I1 1504 aa41.69■■■■■ 4.26
FXR2-201ENST00000250113 CCDC180Q9P1Z9 1646 aa35.55■■■■□ 3.28
FXR2-201ENST00000250113 SHROOM4Q9ULL8 1493 aa35.43■■■■□ 3.26
FXR2-201ENST00000250113 DCAF8L2P0C7V8 631 aa35.11■■■■□ 3.21
FXR2-201ENST00000250113 ZCCHC6Q5VYS8 1495 aaKnown RBP35.11■■■■□ 3.21
FXR2-201ENST00000250113 SUPT5HO00267 1087 aaKnown RBP34.5■■■■□ 3.11
FXR2-201ENST00000250113 DCAF1Q9Y4B6 1507 aa34.07■■■■□ 3.04
FXR2-201ENST00000250113 ABCC9O60706 1549 aa33.71■■■□□ 2.99
FXR2-201ENST00000250113 SCRIBQ14160 1630 aa33.44■■■□□ 2.94
FXR2-201ENST00000250113 MYO15BQ96JP2 1530 aa33.26■■■□□ 2.92
FXR2-201ENST00000250113 CHIC1Q5VXU3 224 aa33.14■■■□□ 2.9
FXR2-201ENST00000250113 NACADO15069 1562 aa33.08■■■□□ 2.89
FXR2-201ENST00000250113 RSF1Q96T23 1441 aaPredicted RBP32.84■■■□□ 2.85
FXR2-201ENST00000250113 RB1CC1Q8TDY2 1594 aa32.69■■■□□ 2.82
FXR2-201ENST00000250113 CECR2Q9BXF3 1484 aa32.66■■■□□ 2.82
FXR2-201ENST00000250113 MROH2BQ7Z745 1585 aa32.44■■■□□ 2.78
FXR2-201ENST00000250113 LOC105371045A0A1W2PR82 267 aa32.26■■■□□ 2.76
FXR2-201ENST00000250113 PABPN1Q86U42 306 aaKnown RBP eCLIP32.25■■■□□ 2.75
FXR2-201ENST00000250113 WIZO95785 1651 aa32.22■■■□□ 2.75
FXR2-201ENST00000250113 UNC13AQ9UPW8 1703 aa32.15■■■□□ 2.74
FXR2-201ENST00000250113 TRIM41Q8WV44 630 aa32.1■■■□□ 2.73
FXR2-201ENST00000250113 BAZ1AQ9NRL2 1556 aaPredicted RBP32.03■■■□□ 2.72
FXR2-201ENST00000250113 FAM9AQ8IZU1 332 aaPredicted RBP31.94■■■□□ 2.7
FXR2-201ENST00000250113 PCGF6Q9BYE7 350 aa31.89■■■□□ 2.7
FXR2-201ENST00000250113 SMARCA4P51532 1647 aa31.84■■■□□ 2.69
FXR2-201ENST00000250113 BICRAQ9NZM4 1560 aa31.83■■■□□ 2.69
FXR2-201ENST00000250113 EHMT2Q96KQ7 1210 aa31.8■■■□□ 2.68
FXR2-201ENST00000250113 TOP2AP11388 1531 aaKnown RBP31.63■■■□□ 2.65
FXR2-201ENST00000250113 CCDC88BA6NC98 1476 aa31.59■■■□□ 2.65
FXR2-201ENST00000250113 HRCP23327 699 aa31.5■■■□□ 2.63
FXR2-201ENST00000250113 SMARCA2P51531 1590 aa31.47■■■□□ 2.63
FXR2-201ENST00000250113 PPARGC1BQ86YN6 1023 aaKnown RBP31.44■■■□□ 2.62
FXR2-201ENST00000250113 EIF4G1Q04637 1599 aaKnown RBP31.39■■■□□ 2.62
FXR2-201ENST00000250113 ABCC8Q09428 1581 aa31.36■■■□□ 2.61
FXR2-201ENST00000250113 ATAD2BQ9ULI0 1458 aa31.22■■■□□ 2.59
FXR2-201ENST00000250113 PEG3Q9GZU2 1588 aa31.17■■■□□ 2.58
FXR2-201ENST00000250113 BAZ1BQ9UIG0 1483 aaKnown RBP31.12■■■□□ 2.57
FXR2-201ENST00000250113 TRIM26Q12899 539 aaPredicted RBP31.04■■■□□ 2.56
FXR2-201ENST00000250113 SOGA1O94964 1423 aa30.99■■■□□ 2.55
FXR2-201ENST00000250113 RUSC2Q8N2Y8 1516 aa30.88■■■□□ 2.53
FXR2-201ENST00000250113 WRNQ14191 1432 aaPredicted RBP eCLIP30.87■■■□□ 2.53
FXR2-201ENST00000250113 CSRNP3Q8WYN3 585 aa30.77■■■□□ 2.52
FXR2-201ENST00000250113 UBTFP17480 764 aaKnown RBP30.7■■■□□ 2.51
FXR2-201ENST00000250113 SYNJ1O43426 1573 aa30.7■■■□□ 2.51
FXR2-201ENST00000250113 NCAPD3P42695 1498 aa30.67■■■□□ 2.5
FXR2-201ENST00000250113 TTBK1Q5TCY1 1321 aaPredicted RBP30.59■■■□□ 2.49
FXR2-201ENST00000250113 EEA1Q15075 1411 aa30.55■■■□□ 2.48
FXR2-201ENST00000250113 HMGXB3Q12766 1538 aa30.54■■■□□ 2.48
FXR2-201ENST00000250113 CEP162Q5TB80 1403 aa30.53■■■□□ 2.48
FXR2-201ENST00000250113 TNIKQ9UKE5 1360 aa30.47■■■□□ 2.47
FXR2-201ENST00000250113 RANGAP1P46060 587 aaPredicted RBP30.4■■■□□ 2.46
FXR2-201ENST00000250113 GOLGA3Q08378 1498 aa30.39■■■□□ 2.46
FXR2-201ENST00000250113 TOP2BQ02880 1626 aa30.31■■■□□ 2.44
FXR2-201ENST00000250113 CFTRP13569 1480 aa30.28■■■□□ 2.44
FXR2-201ENST00000250113 CEP164Q9UPV0 1460 aa30.27■■■□□ 2.44
FXR2-201ENST00000250113 CC2D2AQ9P2K1 1620 aa30.24■■■□□ 2.43
FXR2-201ENST00000250113 RAPGEF2Q9Y4G8 1499 aa30.23■■■□□ 2.43
FXR2-201ENST00000250113 CUX1P39880 1505 aa30.21■■■□□ 2.43
FXR2-201ENST00000250113 BIVM-ERCC5R4GMW8 1640 aa30.16■■■□□ 2.42
FXR2-201ENST00000250113 KIF21BO75037 1637 aa30.14■■■□□ 2.42
FXR2-201ENST00000250113 CADPSQ9ULU8 1353 aa30.11■■■□□ 2.41
FXR2-201ENST00000250113 CLIP1P30622 1438 aa30.09■■■□□ 2.41
FXR2-201ENST00000250113 HNRNPUL2-BSCL2H3BQZ7 746 aaPredicted RBP30.07■■■□□ 2.4
FXR2-201ENST00000250113 ZEB1P37275 1124 aaPredicted RBP30■■■□□ 2.39
FXR2-201ENST00000250113 KIF27Q86VH2 1401 aa29.96■■■□□ 2.39
FXR2-201ENST00000250113 PRXQ9BXM0 1461 aa29.91■■■□□ 2.38
FXR2-201ENST00000250113 CCER1Q8TC90 406 aaPredicted RBP29.9■■■□□ 2.38
FXR2-201ENST00000250113 DNAJC5BQ9UF47 199 aa29.9■■■□□ 2.38
FXR2-201ENST00000250113 NESP48681 1621 aa29.86■■■□□ 2.37
FXR2-201ENST00000250113 APLP2Q06481 763 aa29.84■■■□□ 2.37
FXR2-201ENST00000250113 CUX2O14529 1486 aa29.84■■■□□ 2.37
FXR2-201ENST00000250113 VPS8Q8N3P4 1428 aa29.83■■■□□ 2.37
FXR2-201ENST00000250113 PRDM2Q13029 1718 aa29.82■■■□□ 2.36
FXR2-201ENST00000250113 FANCD2Q9BXW9 1451 aa29.82■■■□□ 2.36
FXR2-201ENST00000250113 FGD5Q6ZNL6 1462 aa29.79■■■□□ 2.36
FXR2-201ENST00000250113 ERICH3Q5RHP9 1530 aa29.76■■■□□ 2.35
FXR2-201ENST00000250113 IGF1RP08069 1367 aa29.73■■■□□ 2.35
FXR2-201ENST00000250113 HNRNPUL2Q1KMD3 747 aaKnown RBP29.72■■■□□ 2.35
FXR2-201ENST00000250113 RAD54L2Q9Y4B4 1467 aa29.63■■■□□ 2.33
FXR2-201ENST00000250113 ARAP1Q96P48 1450 aa29.62■■■□□ 2.33
FXR2-201ENST00000250113 CARMIL1Q5VZK9 1371 aa29.6■■■□□ 2.33
FXR2-201ENST00000250113 KANK4Q5T7N3 995 aaPredicted RBP29.55■■■□□ 2.32
FXR2-201ENST00000250113 TOPBP1Q92547 1522 aa29.54■■■□□ 2.32
FXR2-201ENST00000250113 POLA1P09884 1462 aaPredicted RBP29.5■■■□□ 2.31
FXR2-201ENST00000250113 DNMBPQ6XZF7 1577 aa29.49■■■□□ 2.31
FXR2-201ENST00000250113 ARHGAP35Q9NRY4 1499 aa29.48■■■□□ 2.31
FXR2-201ENST00000250113 P3H3Q8IVL6 736 aa29.46■■■□□ 2.31
FXR2-201ENST00000250113 URB2Q14146 1524 aaKnown RBP29.41■■■□□ 2.3
FXR2-201ENST00000250113 LAMC3Q9Y6N6 1575 aa29.4■■■□□ 2.3
FXR2-201ENST00000250113 TDRD9Q8NDG6 1382 aaKnown RBP29.36■■■□□ 2.29
FXR2-201ENST00000250113 ABCA10Q8WWZ4 1543 aa29.36■■■□□ 2.29
FXR2-201ENST00000250113 PDS5BQ9NTI5 1447 aa29.33■■■□□ 2.29
FXR2-201ENST00000250113 ATP1B4Q9UN42 357 aaPredicted RBP29.32■■■□□ 2.28
FXR2-201ENST00000250113 SCAF1Q9H7N4 1312 aaKnown RBP29.26■■■□□ 2.28
FXR2-201ENST00000250113 ITGAEP38570 1179 aa29.22■■■□□ 2.27
FXR2-201ENST00000250113 KIF21AQ7Z4S6 1674 aa29.2■■■□□ 2.27
FXR2-201ENST00000250113 FHOD3Q2V2M9 1422 aa29.14■■■□□ 2.26
FXR2-201ENST00000250113 DIEXFQ68CQ4 756 aaKnown RBP29.13■■■□□ 2.25
FXR2-201ENST00000250113 GAPVD1Q14C86 1478 aa29.11■■■□□ 2.25
FXR2-201ENST00000250113 WDR97A6NE52 1622 aa29.03■■■□□ 2.24
Retrieved 100 of 20,778 RNA–protein pairs in 14.2 ms