RNA–Protein interactions for RNA: ENST00000429174.6

DYSF-211, Transcript of dysferlin, humanhuman

APPRIS ALT2 TSL 1 (best) BASIC

Gene DYSF, Length 6,739 nt, Biotype protein coding, Subcellular localisation Cytoplasm, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
DYSF-211ENST00000429174 DCAF8L2P0C7V8 631 aa26.81■■□□□ 1.88
DYSF-211ENST00000429174 SUPT5HO00267 1087 aaKnown RBP25.57■■□□□ 1.68
DYSF-211ENST00000429174 EHMT2Q96KQ7 1210 aa25.5■■□□□ 1.67
DYSF-211ENST00000429174 PELP1Q8IZL8 1130 aaKnown RBP25.13■■□□□ 1.61
DYSF-211ENST00000429174 SHROOM4Q9ULL8 1493 aa24.97■■□□□ 1.59
DYSF-211ENST00000429174 TTBK1Q5TCY1 1321 aaPredicted RBP24.66■■□□□ 1.54
DYSF-211ENST00000429174 ERICH6Q7L0X2 663 aa24.5■■□□□ 1.51
DYSF-211ENST00000429174 APLP2Q06481 763 aa24.43■■□□□ 1.5
DYSF-211ENST00000429174 FAM9AQ8IZU1 332 aaPredicted RBP24.34■■□□□ 1.49
DYSF-211ENST00000429174 PCGF6Q9BYE7 350 aa24.34■■□□□ 1.49
DYSF-211ENST00000429174 RANGAP1P46060 587 aaPredicted RBP24.12■■□□□ 1.45
DYSF-211ENST00000429174 CENPBP07199 599 aaPredicted RBP24.07■■□□□ 1.44
DYSF-211ENST00000429174 CCER1Q8TC90 406 aaPredicted RBP24.02■■□□□ 1.44
DYSF-211ENST00000429174 YTHDC1Q96MU7 727 aaKnown RBP23.97■■□□□ 1.43
DYSF-211ENST00000429174 ATP1B4Q9UN42 357 aaPredicted RBP23.81■■□□□ 1.4
DYSF-211ENST00000429174 MYT1Q01538 1121 aa23.79■■□□□ 1.4
DYSF-211ENST00000429174 NISCHQ9Y2I1 1504 aa23.7■■□□□ 1.38
DYSF-211ENST00000429174 NEFLP07196 543 aa23.66■■□□□ 1.38
DYSF-211ENST00000429174 ZEB1P37275 1124 aaPredicted RBP23.6■■□□□ 1.37
DYSF-211ENST00000429174 PPARGC1BQ86YN6 1023 aaKnown RBP23.51■■□□□ 1.35
DYSF-211ENST00000429174 TRIM41Q8WV44 630 aa23.41■■□□□ 1.34
DYSF-211ENST00000429174 UBTFP17480 764 aaKnown RBP23.35■■□□□ 1.33
DYSF-211ENST00000429174 DAXXQ9UER7 740 aaPredicted RBP23.21■■□□□ 1.31
DYSF-211ENST00000429174 POLR3GLQ9BT43 218 aa23.19■■□□□ 1.3
DYSF-211ENST00000429174 CNGB1Q14028 1251 aaPredicted RBP23.17■■□□□ 1.3
DYSF-211ENST00000429174 ITGAEP38570 1179 aa23.02■■□□□ 1.28
DYSF-211ENST00000429174 HRCP23327 699 aa22.89■■□□□ 1.26
DYSF-211ENST00000429174 MYT1LQ9UL68 1186 aa22.85■■□□□ 1.25
DYSF-211ENST00000429174 TRIM26Q12899 539 aaPredicted RBP22.84■■□□□ 1.25
DYSF-211ENST00000429174 CHIC1Q5VXU3 224 aa22.79■■□□□ 1.24
DYSF-211ENST00000429174 HNRNPUL2Q1KMD3 747 aaKnown RBP22.72■■□□□ 1.23
DYSF-211ENST00000429174 ZNF316A6NFI3 1004 aaPredicted RBP22.7■■□□□ 1.22
DYSF-211ENST00000429174 HNRNPUL2-BSCL2H3BQZ7 746 aaPredicted RBP22.7■■□□□ 1.22
DYSF-211ENST00000429174 SLC4A1APQ9BWU0 796 aaKnown RBP22.7■■□□□ 1.22
DYSF-211ENST00000429174 RTL5Q5HYW3 569 aaPredicted RBP22.67■■□□□ 1.22
DYSF-211ENST00000429174 CLSPNQ9HAW4 1339 aa22.63■■□□□ 1.21
DYSF-211ENST00000429174 LOC105371045A0A1W2PR82 267 aa22.61■■□□□ 1.21
DYSF-211ENST00000429174 BCANQ96GW7 911 aa22.54■■□□□ 1.2
DYSF-211ENST00000429174 DIEXFQ68CQ4 756 aaKnown RBP22.44■■□□□ 1.18
DYSF-211ENST00000429174 BCL11AQ9H165 835 aa22.31■■□□□ 1.16
DYSF-211ENST00000429174 GTF3C3Q9Y5Q9 886 aa22.27■■□□□ 1.16
DYSF-211ENST00000429174 NEUROD1Q13562 356 aa22.22■■□□□ 1.15
DYSF-211ENST00000429174 FAM50AQ14320 339 aaKnown RBP22.18■■□□□ 1.14
DYSF-211ENST00000429174 TRIM52Q96A61 297 aa22.11■■□□□ 1.13
DYSF-211ENST00000429174 CDK11AQ9UQ88 783 aaPredicted RBP22.09■■□□□ 1.13
DYSF-211ENST00000429174 ZNF326Q5BKZ1 582 aaKnown RBP22.06■■□□□ 1.12
DYSF-211ENST00000429174 SLC24A1O60721 1099 aa22.03■■□□□ 1.12
DYSF-211ENST00000429174 ZBTB47Q9UFB7 747 aaPredicted RBP21.97■■□□□ 1.11
DYSF-211ENST00000429174 ANP32CO43423 234 aa21.94■■□□□ 1.1
DYSF-211ENST00000429174 NPM2Q86SE8 214 aaKnown RBP21.94■■□□□ 1.1
DYSF-211ENST00000429174 CANXP27824 592 aaKnown RBP21.92■■□□□ 1.1
DYSF-211ENST00000429174 EIF5BO60841 1220 aaKnown RBP21.9■■□□□ 1.1
DYSF-211ENST00000429174 ANP32AP39687 249 aaKnown RBP21.75■■□□□ 1.07
DYSF-211ENST00000429174 ACIN1Q9UKV3 1341 aaKnown RBP21.65■■□□□ 1.06
DYSF-211ENST00000429174 ARXQ96QS3 562 aa21.59■■□□□ 1.05
DYSF-211ENST00000429174 ARID3CA6NKF2 412 aa21.58■■□□□ 1.05
DYSF-211ENST00000429174 FKBP8Q14318 412 aa21.58■■□□□ 1.04
DYSF-211ENST00000429174 NBR1Q14596 966 aa21.56■■□□□ 1.04
DYSF-211ENST00000429174 NEFMP07197 916 aa21.51■■□□□ 1.03
DYSF-211ENST00000429174 HSP90AA1P07900 732 aaKnown RBP21.51■■□□□ 1.03
DYSF-211ENST00000429174 ANP32BQ92688 251 aaKnown RBP21.5■■□□□ 1.03
DYSF-211ENST00000429174 SALL2Q9Y467 1007 aaPredicted RBP21.47■■□□□ 1.03
DYSF-211ENST00000429174 FBLN2P98095 1184 aa21.46■■□□□ 1.03
DYSF-211ENST00000429174 P3H3Q8IVL6 736 aa21.45■■□□□ 1.02
DYSF-211ENST00000429174 FAM9BQ8IZU0 186 aa21.36■■□□□ 1.01
DYSF-211ENST00000429174 ZNF777Q9ULD5 760 aaPredicted RBP21.34■■□□□ 1.01
DYSF-211ENST00000429174 HNRNPUQ00839 825 aaKnown RBP eCLIP21.33■■□□□ 1.01
DYSF-211ENST00000429174 PABPN1Q86U42 306 aaKnown RBP eCLIP21.31■■□□□ 1
DYSF-211ENST00000429174 GLIPR1L2Q4G1C9 344 aa21.29■■□□□ 1
DYSF-211ENST00000429174 PLPPR3Q6T4P5 718 aa21.28■■□□□ 1
DYSF-211ENST00000429174 UPF2Q9HAU5 1272 aaKnown RBP21.27■■□□□ 1
DYSF-211ENST00000429174 IRX6P78412 446 aaPredicted RBP21.26■□□□□ 0.99
DYSF-211ENST00000429174 DDX10Q13206 875 aaKnown RBP21.23■□□□□ 0.99
DYSF-211ENST00000429174 CHGAP10645 457 aaKnown RBP21.19■□□□□ 0.98
DYSF-211ENST00000429174 CCDC136Q96JN2 1154 aa21.17■□□□□ 0.98
DYSF-211ENST00000429174 TONSLQ96HA7 1378 aa21.07■□□□□ 0.96
DYSF-211ENST00000429174 STAG3Q9UJ98 1225 aa21.03■□□□□ 0.96
DYSF-211ENST00000429174 SCAF1Q9H7N4 1312 aaKnown RBP21.02■□□□□ 0.96
DYSF-211ENST00000429174 HIRIP3Q9BW71 556 aaPredicted RBP21.02■□□□□ 0.96
DYSF-211ENST00000429174 TMC1Q8TDI8 760 aa21.02■□□□□ 0.96
DYSF-211ENST00000429174 SENP3-EIF4A1A0A087X0R7 540 aa21.01■□□□□ 0.95
DYSF-211ENST00000429174 SENP3Q9H4L4 574 aaPredicted RBP21.01■□□□□ 0.95
DYSF-211ENST00000429174 TPRNQ4KMQ1 711 aa20.99■□□□□ 0.95
DYSF-211ENST00000429174 GOLGA6L2Q8N9W4 650 aaPredicted RBP20.99■□□□□ 0.95
DYSF-211ENST00000429174 ABCC9O60706 1549 aa20.95■□□□□ 0.94
DYSF-211ENST00000429174 PLEKHG5O94827 1062 aa20.95■□□□□ 0.94
DYSF-211ENST00000429174 WDR43Q15061 677 aaKnown RBP eCLIP20.94■□□□□ 0.94
DYSF-211ENST00000429174 GRWD1Q9BQ67 446 aaKnown RBP eCLIP20.94■□□□□ 0.94
DYSF-211ENST00000429174 CHIC2Q9UKJ5 165 aa20.93■□□□□ 0.94
DYSF-211ENST00000429174 ESF1Q9H501 851 aaKnown RBP20.93■□□□□ 0.94
DYSF-211ENST00000429174 KDM2AQ9Y2K7 1162 aa20.92■□□□□ 0.94
DYSF-211ENST00000429174 MRS2Q9HD23 443 aa20.91■□□□□ 0.94
DYSF-211ENST00000429174 A0A0G2JS52 829 aa20.9■□□□□ 0.94
DYSF-211ENST00000429174 MIER1Q8N108 512 aa20.89■□□□□ 0.94
DYSF-211ENST00000429174 RTN4Q9NQC3 1192 aaKnown RBP20.89■□□□□ 0.93
DYSF-211ENST00000429174 TRIM44Q96DX7 344 aaPredicted RBP20.86■□□□□ 0.93
DYSF-211ENST00000429174 CDK11BP21127 795 aaKnown RBP20.86■□□□□ 0.93
DYSF-211ENST00000429174 CSRNP3Q8WYN3 585 aa20.86■□□□□ 0.93
DYSF-211ENST00000429174 NCLP19338 710 aaKnown RBP20.86■□□□□ 0.93
DYSF-211ENST00000429174 ZBTB7CA1YPR0 619 aa20.85■□□□□ 0.93
Retrieved 100 of 20,778 RNA–protein pairs in 93.4 ms