RNA–Protein interactions for RNA: ENST00000450536.6

REPS1-208, Transcript of RALBP1 associated Eps domain containing 1, humanhuman

APPRIS ALT1 TSL 1 (best) BASIC

Gene REPS1, Length 4,537 nt, Biotype protein coding, Subcellular localisation Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
REPS1-208ENST00000450536 NISCHQ9Y2I1 1504 aa30.64■■■□□ 2.5
REPS1-208ENST00000450536 DCAF8L2P0C7V8 631 aa28.62■■■□□ 2.17
REPS1-208ENST00000450536 SUPT5HO00267 1087 aaKnown RBP27.42■■□□□ 1.98
REPS1-208ENST00000450536 SHROOM4Q9ULL8 1493 aa27.41■■□□□ 1.98
REPS1-208ENST00000450536 PCGF6Q9BYE7 350 aa26.22■■□□□ 1.79
REPS1-208ENST00000450536 EHMT2Q96KQ7 1210 aa26.17■■□□□ 1.78
REPS1-208ENST00000450536 CCDC180Q9P1Z9 1646 aa25.79■■□□□ 1.72
REPS1-208ENST00000450536 FAM9AQ8IZU1 332 aaPredicted RBP25.74■■□□□ 1.71
REPS1-208ENST00000450536 TRIM41Q8WV44 630 aa25.7■■□□□ 1.71
REPS1-208ENST00000450536 PELP1Q8IZL8 1130 aaKnown RBP25.65■■□□□ 1.7
REPS1-208ENST00000450536 ZEB1P37275 1124 aaPredicted RBP25.56■■□□□ 1.68
REPS1-208ENST00000450536 ZCCHC6Q5VYS8 1495 aaKnown RBP25.56■■□□□ 1.68
REPS1-208ENST00000450536 ABCC9O60706 1549 aa25.55■■□□□ 1.68
REPS1-208ENST00000450536 APLP2Q06481 763 aa25.47■■□□□ 1.67
REPS1-208ENST00000450536 TTBK1Q5TCY1 1321 aaPredicted RBP25.4■■□□□ 1.66
REPS1-208ENST00000450536 HRCP23327 699 aa25.4■■□□□ 1.66
REPS1-208ENST00000450536 CENPBP07199 599 aaPredicted RBP25.38■■□□□ 1.65
REPS1-208ENST00000450536 CCER1Q8TC90 406 aaPredicted RBP25.28■■□□□ 1.64
REPS1-208ENST00000450536 CHIC1Q5VXU3 224 aa25.28■■□□□ 1.64
REPS1-208ENST00000450536 TRIM26Q12899 539 aaPredicted RBP25.11■■□□□ 1.61
REPS1-208ENST00000450536 UBTFP17480 764 aaKnown RBP25.03■■□□□ 1.6
REPS1-208ENST00000450536 LOC105371045A0A1W2PR82 267 aa24.9■■□□□ 1.58
REPS1-208ENST00000450536 PPARGC1BQ86YN6 1023 aaKnown RBP24.89■■□□□ 1.58
REPS1-208ENST00000450536 PABPN1Q86U42 306 aaKnown RBP eCLIP24.82■■□□□ 1.56
REPS1-208ENST00000450536 YTHDC1Q96MU7 727 aaKnown RBP24.82■■□□□ 1.56
REPS1-208ENST00000450536 MYT1Q01538 1121 aa24.82■■□□□ 1.56
REPS1-208ENST00000450536 SCRIBQ14160 1630 aa24.81■■□□□ 1.56
REPS1-208ENST00000450536 RANGAP1P46060 587 aaPredicted RBP24.8■■□□□ 1.56
REPS1-208ENST00000450536 DCAF1Q9Y4B6 1507 aa24.8■■□□□ 1.56
REPS1-208ENST00000450536 NACADO15069 1562 aa24.65■■□□□ 1.54
REPS1-208ENST00000450536 RB1CC1Q8TDY2 1594 aa24.62■■□□□ 1.53
REPS1-208ENST00000450536 ERICH6Q7L0X2 663 aa24.56■■□□□ 1.52
REPS1-208ENST00000450536 ATP1B4Q9UN42 357 aaPredicted RBP24.47■■□□□ 1.51
REPS1-208ENST00000450536 NEFLP07196 543 aa24.42■■□□□ 1.5
REPS1-208ENST00000450536 HNRNPUL2-BSCL2H3BQZ7 746 aaPredicted RBP24.31■■□□□ 1.48
REPS1-208ENST00000450536 RSF1Q96T23 1441 aaPredicted RBP24.25■■□□□ 1.47
REPS1-208ENST00000450536 DIEXFQ68CQ4 756 aaKnown RBP24.25■■□□□ 1.47
REPS1-208ENST00000450536 MYO15BQ96JP2 1530 aa24.23■■□□□ 1.47
REPS1-208ENST00000450536 HNRNPUL2Q1KMD3 747 aaKnown RBP24.19■■□□□ 1.46
REPS1-208ENST00000450536 CSRNP3Q8WYN3 585 aa24.1■■□□□ 1.45
REPS1-208ENST00000450536 ITGAEP38570 1179 aa24.01■■□□□ 1.43
REPS1-208ENST00000450536 BAZ1AQ9NRL2 1556 aaPredicted RBP24.01■■□□□ 1.43
REPS1-208ENST00000450536 GTF3C3Q9Y5Q9 886 aa23.99■■□□□ 1.43
REPS1-208ENST00000450536 ACIN1Q9UKV3 1341 aaKnown RBP23.79■■□□□ 1.4
REPS1-208ENST00000450536 EEA1Q15075 1411 aa23.78■■□□□ 1.4
REPS1-208ENST00000450536 CECR2Q9BXF3 1484 aa23.78■■□□□ 1.4
REPS1-208ENST00000450536 BAZ1BQ9UIG0 1483 aaKnown RBP23.75■■□□□ 1.39
REPS1-208ENST00000450536 ZNF316A6NFI3 1004 aaPredicted RBP23.67■■□□□ 1.38
REPS1-208ENST00000450536 MROH2BQ7Z745 1585 aa23.61■■□□□ 1.37
REPS1-208ENST00000450536 WRNQ14191 1432 aaPredicted RBP eCLIP23.59■■□□□ 1.37
REPS1-208ENST00000450536 FAM50AQ14320 339 aaKnown RBP23.56■■□□□ 1.36
REPS1-208ENST00000450536 POLR3GLQ9BT43 218 aa23.52■■□□□ 1.36
REPS1-208ENST00000450536 BCANQ96GW7 911 aa23.49■■□□□ 1.35
REPS1-208ENST00000450536 GOLGA3Q08378 1498 aa23.47■■□□□ 1.35
REPS1-208ENST00000450536 SMARCA2P51531 1590 aa23.44■■□□□ 1.34
REPS1-208ENST00000450536 CNGB1Q14028 1251 aaPredicted RBP23.44■■□□□ 1.34
REPS1-208ENST00000450536 DAXXQ9UER7 740 aaPredicted RBP23.39■■□□□ 1.33
REPS1-208ENST00000450536 SCAF1Q9H7N4 1312 aaKnown RBP23.38■■□□□ 1.33
REPS1-208ENST00000450536 TOP2AP11388 1531 aaKnown RBP23.38■■□□□ 1.33
REPS1-208ENST00000450536 CLIP1P30622 1438 aa23.37■■□□□ 1.33
REPS1-208ENST00000450536 NEUROD1Q13562 356 aa23.36■■□□□ 1.33
REPS1-208ENST00000450536 CCDC88BA6NC98 1476 aa23.35■■□□□ 1.33
REPS1-208ENST00000450536 TNIKQ9UKE5 1360 aa23.35■■□□□ 1.33
REPS1-208ENST00000450536 CEP164Q9UPV0 1460 aa23.34■■□□□ 1.33
REPS1-208ENST00000450536 FBLN2P98095 1184 aa23.32■■□□□ 1.32
REPS1-208ENST00000450536 P3H3Q8IVL6 736 aa23.32■■□□□ 1.32
REPS1-208ENST00000450536 KIF27Q86VH2 1401 aa23.32■■□□□ 1.32
REPS1-208ENST00000450536 CEP162Q5TB80 1403 aa23.31■■□□□ 1.32
REPS1-208ENST00000450536 MYT1LQ9UL68 1186 aa23.3■■□□□ 1.32
REPS1-208ENST00000450536 CDK11AQ9UQ88 783 aaPredicted RBP23.27■■□□□ 1.32
REPS1-208ENST00000450536 WIZO95785 1651 aa23.26■■□□□ 1.31
REPS1-208ENST00000450536 RTL5Q5HYW3 569 aaPredicted RBP23.26■■□□□ 1.31
REPS1-208ENST00000450536 ANP32CO43423 234 aa23.25■■□□□ 1.31
REPS1-208ENST00000450536 TRIM52Q96A61 297 aa23.23■■□□□ 1.31
REPS1-208ENST00000450536 SMARCA4P51532 1647 aa23.23■■□□□ 1.31
REPS1-208ENST00000450536 ATAD2BQ9ULI0 1458 aa23.1■■□□□ 1.29
REPS1-208ENST00000450536 CLSPNQ9HAW4 1339 aa23.1■■□□□ 1.29
REPS1-208ENST00000450536 SOGA1O94964 1423 aa23.05■■□□□ 1.28
REPS1-208ENST00000450536 ABCC8Q09428 1581 aa23.02■■□□□ 1.28
REPS1-208ENST00000450536 MTUS2Q5JR59 1369 aa22.98■■□□□ 1.27
REPS1-208ENST00000450536 FKBP8Q14318 412 aa22.97■■□□□ 1.27
REPS1-208ENST00000450536 MIER1Q8N108 512 aa22.97■■□□□ 1.27
REPS1-208ENST00000450536 ARID3CA6NKF2 412 aa22.92■■□□□ 1.26
REPS1-208ENST00000450536 CUX2O14529 1486 aa22.92■■□□□ 1.26
REPS1-208ENST00000450536 CHMP7Q8WUX9 453 aaPredicted RBP22.92■■□□□ 1.26
REPS1-208ENST00000450536 CARMIL1Q5VZK9 1371 aa22.88■■□□□ 1.25
REPS1-208ENST00000450536 CADPSQ9ULU8 1353 aa22.87■■□□□ 1.25
REPS1-208ENST00000450536 PDS5BQ9NTI5 1447 aa22.85■■□□□ 1.25
REPS1-208ENST00000450536 FHAD1B1AJZ9 1412 aa22.85■■□□□ 1.25
REPS1-208ENST00000450536 ZNF326Q5BKZ1 582 aaKnown RBP22.85■■□□□ 1.25
REPS1-208ENST00000450536 DDX10Q13206 875 aaKnown RBP22.84■■□□□ 1.25
REPS1-208ENST00000450536 ZNF777Q9ULD5 760 aaPredicted RBP22.83■■□□□ 1.25
REPS1-208ENST00000450536 VPS8Q8N3P4 1428 aa22.8■■□□□ 1.24
REPS1-208ENST00000450536 TONSLQ96HA7 1378 aa22.8■■□□□ 1.24
REPS1-208ENST00000450536 ERCC6Q03468 1493 aa22.74■■□□□ 1.23
REPS1-208ENST00000450536 HNRNPUQ00839 825 aaKnown RBP eCLIP22.73■■□□□ 1.23
REPS1-208ENST00000450536 NCAPD3P42695 1498 aa22.72■■□□□ 1.23
REPS1-208ENST00000450536 ANP32AP39687 249 aaKnown RBP22.72■■□□□ 1.23
REPS1-208ENST00000450536 SLC4A1APQ9BWU0 796 aaKnown RBP22.68■■□□□ 1.22
REPS1-208ENST00000450536 TSPY4P0CV99 314 aa22.64■■□□□ 1.22
Retrieved 100 of 20,778 RNA–protein pairs in 27.4 ms