RNA–Protein interactions for RNA: ENST00000252242.8

KRT5-201, Transcript of keratin 5, humanhuman

APPRIS P1 TSL 1 (best) BASIC

Gene KRT5, Length 2,531 nt, Biotype protein coding, Subcellular localisation Cytosol .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
KRT5-201ENST00000252242 NISCHQ9Y2I1 1504 aa38.02■■■■□ 3.68
KRT5-201ENST00000252242 SHROOM4Q9ULL8 1493 aa32.53■■■□□ 2.8
KRT5-201ENST00000252242 CCDC180Q9P1Z9 1646 aa32.36■■■□□ 2.77
KRT5-201ENST00000252242 ZCCHC6Q5VYS8 1495 aaKnown RBP32.08■■■□□ 2.73
KRT5-201ENST00000252242 DCAF8L2P0C7V8 631 aa31.94■■■□□ 2.7
KRT5-201ENST00000252242 SUPT5HO00267 1087 aaKnown RBP31.66■■■□□ 2.66
KRT5-201ENST00000252242 DCAF1Q9Y4B6 1507 aa30.98■■■□□ 2.55
KRT5-201ENST00000252242 MYO15BQ96JP2 1530 aa30.62■■■□□ 2.49
KRT5-201ENST00000252242 ABCC9O60706 1549 aa30.61■■■□□ 2.49
KRT5-201ENST00000252242 SCRIBQ14160 1630 aa30.58■■■□□ 2.49
KRT5-201ENST00000252242 CHIC1Q5VXU3 224 aa30.48■■■□□ 2.47
KRT5-201ENST00000252242 HRCP23327 699 aa30.46■■■□□ 2.47
KRT5-201ENST00000252242 PCGF6Q9BYE7 350 aa30.13■■■□□ 2.41
KRT5-201ENST00000252242 RSF1Q96T23 1441 aaPredicted RBP30.01■■■□□ 2.4
KRT5-201ENST00000252242 NACADO15069 1562 aa30■■■□□ 2.39
KRT5-201ENST00000252242 PPARGC1BQ86YN6 1023 aaKnown RBP29.88■■■□□ 2.37
KRT5-201ENST00000252242 CECR2Q9BXF3 1484 aa29.86■■■□□ 2.37
KRT5-201ENST00000252242 RB1CC1Q8TDY2 1594 aa29.77■■■□□ 2.36
KRT5-201ENST00000252242 LOC105371045A0A1W2PR82 267 aa29.72■■■□□ 2.35
KRT5-201ENST00000252242 MROH2BQ7Z745 1585 aa29.66■■■□□ 2.34
KRT5-201ENST00000252242 WIZO95785 1651 aa29.53■■■□□ 2.32
KRT5-201ENST00000252242 UNC13AQ9UPW8 1703 aa29.4■■■□□ 2.3
KRT5-201ENST00000252242 TRIM41Q8WV44 630 aa29.35■■■□□ 2.29
KRT5-201ENST00000252242 TRIM26Q12899 539 aaPredicted RBP29.34■■■□□ 2.29
KRT5-201ENST00000252242 FAM9AQ8IZU1 332 aaPredicted RBP29.34■■■□□ 2.29
KRT5-201ENST00000252242 EHMT2Q96KQ7 1210 aa29.29■■■□□ 2.28
KRT5-201ENST00000252242 PABPN1Q86U42 306 aaKnown RBP eCLIP29.28■■■□□ 2.28
KRT5-201ENST00000252242 BAZ1AQ9NRL2 1556 aaPredicted RBP29.17■■■□□ 2.26
KRT5-201ENST00000252242 SMARCA4P51532 1647 aa29.06■■■□□ 2.24
KRT5-201ENST00000252242 BICRAQ9NZM4 1560 aa28.99■■■□□ 2.23
KRT5-201ENST00000252242 TOP2AP11388 1531 aaKnown RBP28.88■■■□□ 2.21
KRT5-201ENST00000252242 EIF4G1Q04637 1599 aaKnown RBP28.86■■■□□ 2.21
KRT5-201ENST00000252242 CCDC88BA6NC98 1476 aa28.85■■■□□ 2.21
KRT5-201ENST00000252242 ZEB1P37275 1124 aaPredicted RBP28.84■■■□□ 2.21
KRT5-201ENST00000252242 ABCC8Q09428 1581 aa28.81■■■□□ 2.2
KRT5-201ENST00000252242 SMARCA2P51531 1590 aa28.79■■■□□ 2.2
KRT5-201ENST00000252242 SCAF1Q9H7N4 1312 aaKnown RBP28.48■■■□□ 2.15
KRT5-201ENST00000252242 SOGA1O94964 1423 aa28.42■■■□□ 2.14
KRT5-201ENST00000252242 ATAD2BQ9ULI0 1458 aa28.39■■■□□ 2.14
KRT5-201ENST00000252242 PEG3Q9GZU2 1588 aa28.38■■■□□ 2.13
KRT5-201ENST00000252242 RUSC2Q8N2Y8 1516 aa28.37■■■□□ 2.13
KRT5-201ENST00000252242 PELP1Q8IZL8 1130 aaKnown RBP28.32■■■□□ 2.12
KRT5-201ENST00000252242 BAZ1BQ9UIG0 1483 aaKnown RBP28.31■■■□□ 2.12
KRT5-201ENST00000252242 TTBK1Q5TCY1 1321 aaPredicted RBP28.21■■■□□ 2.11
KRT5-201ENST00000252242 WRNQ14191 1432 aaPredicted RBP eCLIP28.18■■■□□ 2.1
KRT5-201ENST00000252242 HNRNPUL2-BSCL2H3BQZ7 746 aaPredicted RBP28.17■■■□□ 2.1
KRT5-201ENST00000252242 SYNJ1O43426 1573 aa28.16■■■□□ 2.1
KRT5-201ENST00000252242 CSRNP3Q8WYN3 585 aa28.08■■■□□ 2.09
KRT5-201ENST00000252242 CCER1Q8TC90 406 aaPredicted RBP28.06■■■□□ 2.08
KRT5-201ENST00000252242 UBTFP17480 764 aaKnown RBP28.05■■■□□ 2.08
KRT5-201ENST00000252242 CEP162Q5TB80 1403 aa28.03■■■□□ 2.08
KRT5-201ENST00000252242 ACIN1Q9UKV3 1341 aaKnown RBP27.95■■■□□ 2.06
KRT5-201ENST00000252242 NEUROD1Q13562 356 aa27.93■■■□□ 2.06
KRT5-201ENST00000252242 TNIKQ9UKE5 1360 aa27.88■■■□□ 2.05
KRT5-201ENST00000252242 RANGAP1P46060 587 aaPredicted RBP27.86■■■□□ 2.05
KRT5-201ENST00000252242 EEA1Q15075 1411 aa27.86■■■□□ 2.05
KRT5-201ENST00000252242 GOLGA3Q08378 1498 aa27.82■■■□□ 2.04
KRT5-201ENST00000252242 DIEXFQ68CQ4 756 aaKnown RBP27.81■■■□□ 2.04
KRT5-201ENST00000252242 NCAPD3P42695 1498 aa27.8■■■□□ 2.04
KRT5-201ENST00000252242 HMGXB3Q12766 1538 aa27.75■■■□□ 2.03
KRT5-201ENST00000252242 RAPGEF2Q9Y4G8 1499 aa27.71■■■□□ 2.03
KRT5-201ENST00000252242 TOP2BQ02880 1626 aa27.7■■■□□ 2.03
KRT5-201ENST00000252242 GTF3C3Q9Y5Q9 886 aa27.68■■■□□ 2.02
KRT5-201ENST00000252242 CEP164Q9UPV0 1460 aa27.68■■■□□ 2.02
KRT5-201ENST00000252242 KIF21BO75037 1637 aa27.63■■■□□ 2.01
KRT5-201ENST00000252242 CENPBP07199 599 aaPredicted RBP27.62■■■□□ 2.01
KRT5-201ENST00000252242 CUX1P39880 1505 aa27.61■■■□□ 2.01
KRT5-201ENST00000252242 BIVM-ERCC5R4GMW8 1640 aa27.59■■■□□ 2.01
KRT5-201ENST00000252242 CLIP1P30622 1438 aa27.56■■■□□ 2
KRT5-201ENST00000252242 CFTRP13569 1480 aa27.53■■■□□ 2
KRT5-201ENST00000252242 CC2D2AQ9P2K1 1620 aa27.46■■□□□ 1.99
KRT5-201ENST00000252242 ZNF316A6NFI3 1004 aaPredicted RBP27.44■■□□□ 1.98
KRT5-201ENST00000252242 VPS8Q8N3P4 1428 aa27.34■■□□□ 1.97
KRT5-201ENST00000252242 PRXQ9BXM0 1461 aa27.33■■□□□ 1.97
KRT5-201ENST00000252242 HNRNPUL2Q1KMD3 747 aaKnown RBP27.31■■□□□ 1.96
KRT5-201ENST00000252242 CADPSQ9ULU8 1353 aa27.31■■□□□ 1.96
KRT5-201ENST00000252242 KIF27Q86VH2 1401 aa27.28■■□□□ 1.96
KRT5-201ENST00000252242 YTHDC1Q96MU7 727 aaKnown RBP27.27■■□□□ 1.96
KRT5-201ENST00000252242 PRDM2Q13029 1718 aa27.26■■□□□ 1.95
KRT5-201ENST00000252242 CUX2O14529 1486 aa27.21■■□□□ 1.95
KRT5-201ENST00000252242 NESP48681 1621 aa27.21■■□□□ 1.95
KRT5-201ENST00000252242 ERICH3Q5RHP9 1530 aa27.2■■□□□ 1.95
KRT5-201ENST00000252242 ARAP1Q96P48 1450 aa27.2■■□□□ 1.94
KRT5-201ENST00000252242 APLP2Q06481 763 aa27.19■■□□□ 1.94
KRT5-201ENST00000252242 MIER1Q8N108 512 aa27.19■■□□□ 1.94
KRT5-201ENST00000252242 DNAJC5BQ9UF47 199 aa27.19■■□□□ 1.94
KRT5-201ENST00000252242 FGD5Q6ZNL6 1462 aa27.17■■□□□ 1.94
KRT5-201ENST00000252242 KANK4Q5T7N3 995 aaPredicted RBP27.12■■□□□ 1.93
KRT5-201ENST00000252242 FANCD2Q9BXW9 1451 aa27.1■■□□□ 1.93
KRT5-201ENST00000252242 IGF1RP08069 1367 aa27.08■■□□□ 1.93
KRT5-201ENST00000252242 RAD54L2Q9Y4B4 1467 aa27.04■■□□□ 1.92
KRT5-201ENST00000252242 ARHGAP35Q9NRY4 1499 aa27.01■■□□□ 1.92
KRT5-201ENST00000252242 MYT1Q01538 1121 aa26.97■■□□□ 1.91
KRT5-201ENST00000252242 CARMIL1Q5VZK9 1371 aa26.96■■□□□ 1.91
KRT5-201ENST00000252242 P3H3Q8IVL6 736 aa26.92■■□□□ 1.9
KRT5-201ENST00000252242 TOPBP1Q92547 1522 aa26.89■■□□□ 1.89
KRT5-201ENST00000252242 POLA1P09884 1462 aaPredicted RBP26.88■■□□□ 1.89
KRT5-201ENST00000252242 DNMBPQ6XZF7 1577 aa26.85■■□□□ 1.89
KRT5-201ENST00000252242 ITGAEP38570 1179 aa26.8■■□□□ 1.88
KRT5-201ENST00000252242 URB2Q14146 1524 aaKnown RBP26.78■■□□□ 1.88
Retrieved 100 of 20,778 RNA–protein pairs in 67 ms