Protein–RNA interactions for Protein: Q96PW8

CSPG4P5, Putative uncharacterized protein KIAA1920, humanhuman

Predictions only

Length 444 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
CSPG4P5Q96PW8 HSCB-202ENST00000398941 955 ntTSL 2 BASIC21.34■■□□□ 1.01
CSPG4P5Q96PW8 AC091799.1-201ENST00000422823 811 ntBASIC21.34■■□□□ 1.01
CSPG4P5Q96PW8 PYCR3-203ENST00000433751 1000 ntAPPRIS ALT2 TSL 2 BASIC21.34■■□□□ 1.01
CSPG4P5Q96PW8 CDKN3-204ENST00000442975 727 ntTSL 1 (best) BASIC21.34■■□□□ 1.01
CSPG4P5Q96PW8 BRI3-207ENST00000539286 699 ntTSL 2 BASIC21.34■■□□□ 1.01
CSPG4P5Q96PW8 CAPNS1-205ENST00000588780 1035 ntAPPRIS ALT2 TSL 5 BASIC21.34■■□□□ 1.01
CSPG4P5Q96PW8 SPI1-202ENST00000378538 1403 ntAPPRIS P3 TSL 1 (best) BASIC21.34■■□□□ 1.01
CSPG4P5Q96PW8 NRN1-203ENST00000616243 1556 ntAPPRIS P1 TSL 4 BASIC21.34■■□□□ 1.01
CSPG4P5Q96PW8 CDIPT-202ENST00000561555 1726 ntTSL 2 BASIC21.34■■□□□ 1.01
CSPG4P5Q96PW8 SNAP23-202ENST00000349777 2480 ntTSL 2 BASIC21.34■■□□□ 1.01
CSPG4P5Q96PW8 VEGFA-204ENST00000372064 2909 ntTSL 1 (best) BASIC21.34■■□□□ 1.01
CSPG4P5Q96PW8 SNX21-201ENST00000342644 1506 ntTSL 1 (best) BASIC21.34■■□□□ 1.01
CSPG4P5Q96PW8 PAQR6-215ENST00000623241 1961 ntTSL 1 (best) BASIC21.34■■□□□ 1.01
CSPG4P5Q96PW8 ABLIM2-205ENST00000428004 2573 ntTSL 1 (best) BASIC21.34■■□□□ 1.01
CSPG4P5Q96PW8 KLHDC1-201ENST00000359332 2691 ntAPPRIS P1 TSL 1 (best) BASIC21.33■■□□□ 1.01
CSPG4P5Q96PW8 DYRK3-202ENST00000367108 2218 ntTSL 1 (best) BASIC21.33■■□□□ 1.01
CSPG4P5Q96PW8 SLC35E4-202ENST00000406566 2081 ntTSL 1 (best) BASIC21.33■■□□□ 1.01
CSPG4P5Q96PW8 ENTPD6-203ENST00000376652 2750 ntAPPRIS P3 TSL 1 (best) BASIC21.33■■□□□ 1.01
CSPG4P5Q96PW8 PILRB-207ENST00000448382 2314 ntTSL 2 BASIC21.33■■□□□ 1.01
CSPG4P5Q96PW8 MAP7-206ENST00000611373 2317 ntAPPRIS ALT2 TSL 5 BASIC21.33■■□□□ 1.01
CSPG4P5Q96PW8 ME2-216ENST00000639850 2331 ntTSL 5 BASIC21.33■■□□□ 1.01
CSPG4P5Q96PW8 RAB1B-201ENST00000311481 2007 ntAPPRIS P1 TSL 1 (best) BASIC21.33■■□□□ 1.01
CSPG4P5Q96PW8 DALRD3-202ENST00000341949 1739 ntAPPRIS P1 TSL 1 (best) BASIC21.33■■□□□ 1.01
CSPG4P5Q96PW8 TMEM151B-202ENST00000451188 4895 ntAPPRIS P2 TSL 5 BASIC21.33■■□□□ 1.01
CSPG4P5Q96PW8 IRAK3-203ENST00000545837 1579 ntTSL 1 (best) BASIC21.33■■□□□ 1.01
CSPG4P5Q96PW8 SCARB1-211ENST00000546215 1597 ntTSL 1 (best) BASIC21.33■■□□□ 1.01
CSPG4P5Q96PW8 ARFRP1-214ENST00000622789 2559 ntAPPRIS P1 TSL 1 (best) BASIC21.33■■□□□ 1.01
CSPG4P5Q96PW8 CCDC74B-205ENST00000409943 1296 ntAPPRIS ALT2 TSL 1 (best) BASIC21.33■■□□□ 1.01
CSPG4P5Q96PW8 AL121761.1-202ENST00000412571 415 ntTSL 2 BASIC21.33■■□□□ 1.01
CSPG4P5Q96PW8 ATPIF1-203ENST00000468425 539 ntTSL 2 BASIC21.33■■□□□ 1.01
CSPG4P5Q96PW8 SPI1-203ENST00000533030 661 ntTSL 2 BASIC21.33■■□□□ 1.01
CSPG4P5Q96PW8 NUF2-208ENST00000524800 1845 ntTSL 5 BASIC21.33■■□□□ 1.01
CSPG4P5Q96PW8 PTGER3-212ENST00000628037 1815 ntAPPRIS ALT2 TSL 1 (best) BASIC21.33■■□□□ 1.01
CSPG4P5Q96PW8 OLA1-204ENST00000409546 2071 ntTSL 5 BASIC21.33■■□□□ 1
CSPG4P5Q96PW8 MAGI2-201ENST00000354212 6880 ntAPPRIS P3 TSL 1 (best) BASIC21.33■■□□□ 1
CSPG4P5Q96PW8 AP005233.1-201ENST00000562341 2424 ntTSL 2 BASIC21.33■■□□□ 1
CSPG4P5Q96PW8 KIRREL2-201ENST00000262625 1969 ntAPPRIS ALT2 TSL 1 (best) BASIC21.32■■□□□ 1
CSPG4P5Q96PW8 ZNF513-202ENST00000407879 2077 ntTSL 1 (best) BASIC21.32■■□□□ 1
CSPG4P5Q96PW8 NEUROG1-201ENST00000314744 1668 ntAPPRIS P1 BASIC21.32■■□□□ 1
CSPG4P5Q96PW8 TGFBR1-202ENST00000374994 6516 ntAPPRIS P1 TSL 1 (best) BASIC21.32■■□□□ 1
CSPG4P5Q96PW8 MIR935-201ENST00000401179 91 ntBASIC21.32■■□□□ 1
CSPG4P5Q96PW8 AC099681.3-201ENST00000421500 939 ntTSL 4 BASIC21.32■■□□□ 1
CSPG4P5Q96PW8 AC009086.2-201ENST00000449759 610 ntAPPRIS P1 TSL 3 BASIC21.32■■□□□ 1
CSPG4P5Q96PW8 CDKN2A-205ENST00000479692 544 ntTSL 5 BASIC21.32■■□□□ 1
CSPG4P5Q96PW8 HAS1-203ENST00000594621 760 ntTSL 1 (best) BASIC21.32■■□□□ 1
CSPG4P5Q96PW8 WWOX-218ENST00000627394 894 ntTSL 5 BASIC21.32■■□□□ 1
CSPG4P5Q96PW8 AC116050.2-201ENST00000612102 1779 ntBASIC21.32■■□□□ 1
CSPG4P5Q96PW8 ZNF497-202ENST00000425453 2261 ntAPPRIS P1 TSL 1 (best) BASIC21.32■■□□□ 1
CSPG4P5Q96PW8 CDK5R2-201ENST00000302625 2508 ntAPPRIS P1 BASIC21.32■■□□□ 1
CSPG4P5Q96PW8 PTPRM-211ENST00000580170 5941 ntAPPRIS ALT2 TSL 1 (best) BASIC21.32■■□□□ 1
CSPG4P5Q96PW8 ZDHHC8P1-201ENST00000255890 2382 ntTSL 2 BASIC21.32■■□□□ 1
CSPG4P5Q96PW8 GNB4-204ENST00000468623 1360 ntAPPRIS P1 TSL 2 BASIC21.32■■□□□ 1
CSPG4P5Q96PW8 TRIP13-201ENST00000166345 2672 ntAPPRIS P1 TSL 1 (best) BASIC21.32■■□□□ 1
CSPG4P5Q96PW8 COMT-202ENST00000361682 2437 ntAPPRIS P3 TSL 1 (best) BASIC21.31■■□□□ 1
CSPG4P5Q96PW8 CLDND1-201ENST00000341181 2161 ntAPPRIS P1 TSL 1 (best) BASIC21.31■■□□□ 1
CSPG4P5Q96PW8 TRIM4-202ENST00000354241 1942 ntTSL 1 (best) BASIC21.31■■□□□ 1
CSPG4P5Q96PW8 LYN-202ENST00000519728 2297 ntAPPRIS P3 TSL 1 (best) BASIC21.31■■□□□ 1
CSPG4P5Q96PW8 PPP1R13B-201ENST00000202556 4958 ntAPPRIS P1 TSL 1 (best) BASIC21.31■■□□□ 1
CSPG4P5Q96PW8 AL157384.1-201ENST00000445995 2473 ntBASIC21.31■■□□□ 1
CSPG4P5Q96PW8 CHRDL2-203ENST00000376332 1867 ntAPPRIS ALT2 TSL 1 (best) BASIC21.31■■□□□ 1
CSPG4P5Q96PW8 ITGB1BP1-202ENST00000355346 1963 ntAPPRIS P1 TSL 1 (best) BASIC21.31■■□□□ 1
CSPG4P5Q96PW8 ME3-201ENST00000323418 1068 ntTSL 5 BASIC21.31■■□□□ 1
CSPG4P5Q96PW8 UQCRFS1P1-201ENST00000435169 820 ntBASIC21.31■■□□□ 1
CSPG4P5Q96PW8 KRT18P11-201ENST00000435214 1283 ntBASIC21.31■■□□□ 1
CSPG4P5Q96PW8 AP2S1-207ENST00000599990 829 ntAPPRIS ALT1 TSL 2 BASIC21.31■■□□□ 1
CSPG4P5Q96PW8 AC010536.3-201ENST00000620306 533 ntBASIC21.31■■□□□ 1
CSPG4P5Q96PW8 SMARCB1-202ENST00000344921 1728 ntTSL 2 BASIC21.31■■□□□ 1
CSPG4P5Q96PW8 WDR4-202ENST00000398208 2122 ntAPPRIS P1 TSL 1 (best) BASIC21.31■■□□□ 1
CSPG4P5Q96PW8 KLHDC4-204ENST00000353170 1663 ntAPPRIS ALT2 TSL 1 (best) BASIC21.31■■□□□ 1
CSPG4P5Q96PW8 DUSP7-202ENST00000495880 3340 ntAPPRIS P1 TSL 1 (best) BASIC21.31■■□□□ 1
CSPG4P5Q96PW8 SHISA4-201ENST00000362011 1341 ntAPPRIS P1 TSL 1 (best) BASIC21.3■■□□□ 1
CSPG4P5Q96PW8 ARNTL2-209ENST00000546179 1861 ntAPPRIS ALT2 TSL 2 BASIC21.3■■□□□ 1
CSPG4P5Q96PW8 TCP11-202ENST00000311875 2166 ntAPPRIS ALT2 TSL 1 (best) BASIC21.3■■□□□ 1
CSPG4P5Q96PW8 GAS2-202ENST00000454584 2286 ntAPPRIS P1 TSL 1 (best) BASIC21.3■■□□□ 1
CSPG4P5Q96PW8 SYTL1-211ENST00000618673 1712 ntTSL 5 BASIC21.3■■□□□ 1
CSPG4P5Q96PW8 PLD6-201ENST00000321560 2560 ntAPPRIS P1 TSL 1 (best) BASIC21.3■■□□□ 1
CSPG4P5Q96PW8 PCMT1-201ENST00000367378 1293 ntAPPRIS P3 TSL 1 (best) BASIC21.3■■□□□ 1
CSPG4P5Q96PW8 DHRS4-202ENST00000397074 785 ntTSL 5 BASIC21.3■■□□□ 1
CSPG4P5Q96PW8 AC006015.1-201ENST00000429970 570 ntBASIC21.3■■□□□ 1
CSPG4P5Q96PW8 RPL29-209ENST00000495383 713 ntAPPRIS P1 TSL 2 BASIC21.3■■□□□ 1
CSPG4P5Q96PW8 TRIQK-221ENST00000524107 737 ntAPPRIS P1 TSL 3 BASIC21.3■■□□□ 1
CSPG4P5Q96PW8 CD44-222ENST00000526025 1052 ntTSL 2 BASIC21.3■■□□□ 1
CSPG4P5Q96PW8 RAP1B-220ENST00000539091 977 ntTSL 2 BASIC21.3■■□□□ 1
CSPG4P5Q96PW8 STAC-204ENST00000457375 1366 ntTSL 2 BASIC21.3■■□□□ 1
CSPG4P5Q96PW8 EPHA6-202ENST00000470610 2058 ntTSL 2 BASIC21.3■■□□□ 1
CSPG4P5Q96PW8 ESRRA-202ENST00000405666 2283 ntAPPRIS P3 TSL 1 (best) BASIC21.3■■□□□ 1
CSPG4P5Q96PW8 POLDIP2-202ENST00000618887 1524 ntTSL 2 BASIC21.29■■□□□ 1
CSPG4P5Q96PW8 FASTK-217ENST00000540185 1609 ntTSL 5 BASIC21.29■■□□□ 1
CSPG4P5Q96PW8 AL161756.1-202ENST00000359491 1717 ntTSL 1 (best) BASIC21.29■■□□□ 1
CSPG4P5Q96PW8 ZNF282-203ENST00000479907 1815 ntTSL 2 BASIC21.29■■□□□ 1
CSPG4P5Q96PW8 AC007225.1-201ENST00000566331 1836 ntBASIC21.29■■□□□ 1
CSPG4P5Q96PW8 SLC25A10-201ENST00000331531 1946 ntTSL 1 (best) BASIC21.29■■□□□ 1
CSPG4P5Q96PW8 ZNF511-201ENST00000359035 2004 ntTSL 2 BASIC21.29■■□□□ 1
CSPG4P5Q96PW8 T-202ENST00000366871 2250 ntTSL 1 (best) BASIC21.29■■□□□ 1
CSPG4P5Q96PW8 NFYC-204ENST00000372653 1862 ntTSL 2 BASIC21.29■■□□□ 1
CSPG4P5Q96PW8 NELFE-202ENST00000375429 1584 ntAPPRIS P2 TSL 1 (best) BASIC21.29■■□□□ 1
CSPG4P5Q96PW8 EDA-209ENST00000525810 843 ntTSL 1 (best) BASIC21.29■■□□□ 1
CSPG4P5Q96PW8 EDA-210ENST00000527388 927 ntTSL 1 (best) BASIC21.29■■□□□ 1
CSPG4P5Q96PW8 NMRAL1-212ENST00000574425 1240 ntAPPRIS P1 TSL 2 BASIC21.29■■□□□ 1
CSPG4P5Q96PW8 PDCD5-204ENST00000586035 601 ntTSL 3 BASIC21.29■■□□□ 1
Retrieved 100 of 98,524 protein–RNA pairs in 25.2 ms