Protein–RNA interactions for Protein: Q07807

PUF3, mRNA-binding protein PUF3, yeastyeast

Known RBP RIP-Chip data

Length 879 aa.

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Protein RNA Prediction (catRAPID) Interaction (RIP-Chip)
Gene UniProt Accession Gene Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score Detected Interaction
PUF3Q07807 YOR385WYOR385W 873 nt4.13□□□□□ -1.75
PUF3Q07807 snR42snR42 351 nt4.13□□□□□ -1.75
PUF3Q07807 PUB1YNL016W 1362 nt4.13□□□□□ -1.75
PUF3Q07807 PCK1YKR097W 1650 nt4.13□□□□□ -1.75
PUF3Q07807 USA1YML029W 2517 nt4.13□□□□□ -1.75
PUF3Q07807 ATG21YPL100W 1491 nt4.12□□□□□ -1.75
PUF3Q07807 RAD1YPL022W 3303 nt4.12□□□□□ -1.75 RIP-Chip
PUF3Q07807 IMD4YML056C 1575 nt4.12□□□□□ -1.75
PUF3Q07807 SPI1YER150W 447 nt4.12□□□□□ -1.75
PUF3Q07807 YGL041CYGL041C 204 nt4.12□□□□□ -1.75
PUF3Q07807 HHF2YNL030W 312 nt4.12□□□□□ -1.75
PUF3Q07807 INO4YOL108C 456 nt4.12□□□□□ -1.75
PUF3Q07807 GAL11YOL051W 3246 nt4.12□□□□□ -1.75
PUF3Q07807 YPS6YIR039C 1614 nt4.12□□□□□ -1.75
PUF3Q07807 UTP13YLR222C 2454 nt4.12□□□□□ -1.75
PUF3Q07807 TAF7YMR227C 1773 nt4.12□□□□□ -1.75
PUF3Q07807 MNR2YKL064W 2910 nt4.11□□□□□ -1.75
PUF3Q07807 RAD6YGL058W 519 nt4.11□□□□□ -1.75
PUF3Q07807 YHR139C-AYHR139C-A 312 nt4.11□□□□□ -1.75
PUF3Q07807 PHS1YJL097W 654 nt4.11□□□□□ -1.75
PUF3Q07807 ABF2YMR072W 552 nt4.11□□□□□ -1.75
PUF3Q07807 URA10YMR271C 684 nt4.11□□□□□ -1.75
PUF3Q07807 SRL1YOR247W 633 nt4.11□□□□□ -1.75
PUF3Q07807 RAD54YGL163C 2697 nt4.11□□□□□ -1.75
PUF3Q07807 VHS3YOR054C 2025 nt4.11□□□□□ -1.75
PUF3Q07807 VHR2YER064C 1518 nt4.11□□□□□ -1.75
PUF3Q07807 TOM70YNL121C 1854 nt4.1□□□□□ -1.75 RIP-Chip
PUF3Q07807 YDR169C-AYDR169C-A 150 nt4.1□□□□□ -1.75
PUF3Q07807 WIP1YDR374W-A 270 nt4.1□□□□□ -1.75
PUF3Q07807 HMF1YER057C 390 nt4.1□□□□□ -1.75
PUF3Q07807 VEL1YGL258W 621 nt4.1□□□□□ -1.75
PUF3Q07807 YIL141WYIL141W 390 nt4.1□□□□□ -1.75
PUF3Q07807 IST1YNL265C 897 nt4.1□□□□□ -1.75
PUF3Q07807 ESF2YNR054C 951 nt4.1□□□□□ -1.75
PUF3Q07807 snR13snR13 124 nt4.1□□□□□ -1.75
PUF3Q07807 DPB3YBR278W 606 nt4.1□□□□□ -1.75
PUF3Q07807 SPT23YKL020C 3249 nt4.1□□□□□ -1.75
PUF3Q07807 RIM13YMR154C 2184 nt4.1□□□□□ -1.75
PUF3Q07807 KIN4YOR233W 2403 nt4.1□□□□□ -1.75
PUF3Q07807 VMA1YDL185W 3216 nt4.09□□□□□ -1.75
PUF3Q07807 YHR032C-AYHR032C-A 120 nt4.09□□□□□ -1.75
PUF3Q07807 YLR428CYLR428C 345 nt4.09□□□□□ -1.75
PUF3Q07807 PIM1YBL022C 3402 nt4.09□□□□□ -1.76
PUF3Q07807 RNA14YMR061W 2034 nt4.09□□□□□ -1.76
PUF3Q07807 HUL5YGL141W 2733 nt4.08□□□□□ -1.76
PUF3Q07807 RPS13YDR064W 456 nt4.08□□□□□ -1.76
PUF3Q07807 TRS65YGR166W 1683 nt4.08□□□□□ -1.76
PUF3Q07807 HOP1YIL072W 1818 nt4.08□□□□□ -1.76
PUF3Q07807 RPL15AYLR029C 615 nt4.08□□□□□ -1.76
PUF3Q07807 SIP18YMR175W 240 nt4.08□□□□□ -1.76
PUF3Q07807 ATG2YNL242W 4779 nt4.08□□□□□ -1.76 RIP-Chip
PUF3Q07807 YOL019WYOL019W 1656 nt4.08□□□□□ -1.76
PUF3Q07807 YPL229WYPL229W 621 nt4.08□□□□□ -1.76 RIP-Chip
PUF3Q07807 ARP7YPR034W 1434 nt4.08□□□□□ -1.76
PUF3Q07807 YBR141W-AYBR141W-A 96 nt4.08□□□□□ -1.76
PUF3Q07807 YDL211CYDL211C 1119 nt4.07□□□□□ -1.76
PUF3Q07807 RPL30YGL030W 318 nt4.07□□□□□ -1.76
PUF3Q07807 ILV5YLR355C 1188 nt4.07□□□□□ -1.76
PUF3Q07807 RPL6BYLR448W 531 nt4.07□□□□□ -1.76
PUF3Q07807 YLR458WYLR458W 381 nt4.07□□□□□ -1.76
PUF3Q07807 IES4YOR189W 351 nt4.07□□□□□ -1.76
PUF3Q07807 snR48snR48 113 nt4.07□□□□□ -1.76
PUF3Q07807 PSP1YDR505C 2526 nt4.06□□□□□ -1.76
PUF3Q07807 YNL193WYNL193W 1677 nt4.06□□□□□ -1.76
PUF3Q07807 NDD1YOR372C 1665 nt4.06□□□□□ -1.76
PUF3Q07807 BUD5YCR038C 1929 nt4.06□□□□□ -1.76
PUF3Q07807 YGL042CYGL042C 306 nt4.06□□□□□ -1.76
PUF3Q07807 YHR214W-AYHR214W-A 486 nt4.06□□□□□ -1.76
PUF3Q07807 YKL162C-AYKL162C-A 153 nt4.06□□□□□ -1.76
PUF3Q07807 SDH2YLL041C 801 nt4.06□□□□□ -1.76
PUF3Q07807 YAR068WYAR068W 486 nt4.06□□□□□ -1.76
PUF3Q07807 YBR085C-AYBR085C-A 258 nt4.06□□□□□ -1.76
PUF3Q07807 snR35snR35 204 nt4.06□□□□□ -1.76
PUF3Q07807 snR49snR49 165 nt4.06□□□□□ -1.76
PUF3Q07807 YBR238CYBR238C 2196 nt4.06□□□□□ -1.76
PUF3Q07807 YDL199CYDL199C 2064 nt4.06□□□□□ -1.76
PUF3Q07807 EAP1YKL204W 1899 nt4.05□□□□□ -1.76
PUF3Q07807 SNA4YDL123W 423 nt4.05□□□□□ -1.76
PUF3Q07807 YDR344CYDR344C 444 nt4.05□□□□□ -1.76
PUF3Q07807 YER076W-AYER076W-A 348 nt4.05□□□□□ -1.76
PUF3Q07807 YGL149WYGL149W 306 nt4.05□□□□□ -1.76
PUF3Q07807 COX18YGR062C 951 nt4.05□□□□□ -1.76 RIP-Chip
PUF3Q07807 MVB12YGR206W 306 nt4.05□□□□□ -1.76
PUF3Q07807 RPL8BYLL045C 771 nt4.05□□□□□ -1.76
PUF3Q07807 IRC23YOR044W 474 nt4.05□□□□□ -1.76
PUF3Q07807 YBR201C-AYBR201C-A 204 nt4.05□□□□□ -1.76
PUF3Q07807 MTC4YBR255W 2085 nt4.05□□□□□ -1.76
PUF3Q07807 UBP12YJL197W 3765 nt4.05□□□□□ -1.76
PUF3Q07807 GRS2YPR081C 1857 nt4.05□□□□□ -1.76
PUF3Q07807 ISW2YOR304W 3363 nt4.04□□□□□ -1.76
PUF3Q07807 YIL012WYIL012W 342 nt4.04□□□□□ -1.76
PUF3Q07807 YLR230WYLR230W 306 nt4.04□□□□□ -1.76
PUF3Q07807 CWC24YLR323C 780 nt4.04□□□□□ -1.76
PUF3Q07807 PIS1YPR113W 663 nt4.04□□□□□ -1.76
PUF3Q07807 DAD3YBR233W-A 285 nt4.04□□□□□ -1.76
PUF3Q07807 ECM22YLR228C 2445 nt4.04□□□□□ -1.76
PUF3Q07807 AIM21YIR003W 2040 nt4.04□□□□□ -1.76
PUF3Q07807 SRO7YPR032W 3102 nt4.03□□□□□ -1.76
PUF3Q07807 PET191YJR034W 327 nt4.03□□□□□ -1.76 RIP-Chip
PUF3Q07807 YCK2YNL154C 1641 nt4.03□□□□□ -1.77
Retrieved 100 of 7,029 protein–RNA pairs in 13.6 ms