Protein–RNA interactions for Protein: O75841

UPK1B, Uroplakin-1b, humanhuman

Predictions only

Length 260 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
UPK1BO75841 CWH43-201ENST00000226432 2472 ntAPPRIS P1 TSL 1 (best) BASIC18.07■□□□□ 0.48
UPK1BO75841 TBX2-201ENST00000240328 3339 ntAPPRIS P1 TSL 1 (best) BASIC18.06■□□□□ 0.48
UPK1BO75841 C14orf79-202ENST00000547315 2370 ntAPPRIS P2 TSL 1 (best) BASIC18.06■□□□□ 0.48
UPK1BO75841 PNMA8B-202ENST00000599531 5308 ntAPPRIS P1 BASIC18.06■□□□□ 0.48
UPK1BO75841 SPHK1-207ENST00000590959 1851 ntAPPRIS ALT2 TSL 1 (best) BASIC18.06■□□□□ 0.48
UPK1BO75841 CHPF-201ENST00000243776 3013 ntAPPRIS P1 TSL 1 (best) BASIC18.06■□□□□ 0.48
UPK1BO75841 AC009831.1-201ENST00000580420 1582 ntBASIC18.06■□□□□ 0.48
UPK1BO75841 WBP1-201ENST00000233615 1294 ntAPPRIS P2 TSL 1 (best) BASIC18.06■□□□□ 0.48
UPK1BO75841 AKAP8L-201ENST00000397410 2146 ntAPPRIS P1 TSL 1 (best) BASIC18.06■□□□□ 0.48
UPK1BO75841 POLD3-203ENST00000527458 2122 ntTSL 1 (best) BASIC18.06■□□□□ 0.48
UPK1BO75841 RHOT1-202ENST00000354266 2919 ntTSL 1 (best) BASIC18.06■□□□□ 0.48
UPK1BO75841 EI24-211ENST00000534546 1544 ntTSL 2 BASIC18.06■□□□□ 0.48
UPK1BO75841 PXYLP1-203ENST00000502783 2066 ntTSL 2 BASIC18.06■□□□□ 0.48
UPK1BO75841 MEIS3-202ENST00000441740 1758 ntAPPRIS ALT2 TSL 1 (best) BASIC18.06■□□□□ 0.48
UPK1BO75841 AGFG2-201ENST00000300176 4796 ntAPPRIS P1 TSL 1 (best) BASIC18.06■□□□□ 0.48
UPK1BO75841 RBM42-205ENST00000589871 1487 ntTSL 5 BASIC18.06■□□□□ 0.48
UPK1BO75841 ATIC-205ENST00000435675 2275 ntTSL 2 BASIC18.06■□□□□ 0.48
UPK1BO75841 LTB4R2-202ENST00000528054 3092 ntBASIC18.06■□□□□ 0.48
UPK1BO75841 LRP5L-203ENST00000444995 1714 ntAPPRIS ALT2 TSL 5 BASIC18.06■□□□□ 0.48
UPK1BO75841 ISLR2-210ENST00000565540 2780 ntAPPRIS P1 TSL 4 BASIC18.06■□□□□ 0.48
UPK1BO75841 GLS-202ENST00000338435 4475 ntAPPRIS ALT1 TSL 1 (best) BASIC18.06■□□□□ 0.48
UPK1BO75841 SH2B3-201ENST00000341259 5406 ntAPPRIS P1 TSL 1 (best) BASIC18.05■□□□□ 0.48
UPK1BO75841 FSTL1-201ENST00000295633 5943 ntAPPRIS P1 TSL 1 (best) BASIC18.05■□□□□ 0.48
UPK1BO75841 IMPDH1-208ENST00000470772 1888 ntAPPRIS ALT1 TSL 5 BASIC18.05■□□□□ 0.48
UPK1BO75841 PDZD3-203ENST00000525131 1882 ntTSL 2 BASIC18.05■□□□□ 0.48
UPK1BO75841 KLHL17-201ENST00000338591 2560 ntAPPRIS P1 TSL 1 (best) BASIC18.05■□□□□ 0.48
UPK1BO75841 ACADVL-203ENST00000356839 2323 ntAPPRIS P1 TSL 1 (best) BASIC18.05■□□□□ 0.48
UPK1BO75841 TMPRSS5-202ENST00000536856 1811 ntTSL 1 (best) BASIC18.05■□□□□ 0.48
UPK1BO75841 DOK4-218ENST00000569548 1848 ntAPPRIS P1 TSL 1 (best) BASIC18.05■□□□□ 0.48
UPK1BO75841 AP000547.3-201ENST00000592918 1576 ntTSL 1 (best) BASIC18.05■□□□□ 0.48
UPK1BO75841 NUTM2F-202ENST00000341207 2516 ntAPPRIS ALT2 TSL 5 BASIC18.05■□□□□ 0.48
UPK1BO75841 NUTM2G-202ENST00000372322 2516 ntAPPRIS ALT2 TSL 5 BASIC18.05■□□□□ 0.48
UPK1BO75841 MYH14-206ENST00000596571 5988 ntAPPRIS ALT2 TSL 5 BASIC18.05■□□□□ 0.48
UPK1BO75841 LRWD1-201ENST00000292616 2215 ntAPPRIS P1 TSL 1 (best) BASIC18.05■□□□□ 0.48
UPK1BO75841 AC009531.1-201ENST00000442323 580 ntTSL 4 BASIC18.05■□□□□ 0.48
UPK1BO75841 UPF3A-209ENST00000492270 494 ntTSL 2 BASIC18.05■□□□□ 0.48
UPK1BO75841 MLF2-206ENST00000539187 1110 ntAPPRIS P1 TSL 1 (best) BASIC18.05■□□□□ 0.48
UPK1BO75841 TAF5L-201ENST00000258281 3112 ntAPPRIS P1 TSL 5 BASIC18.05■□□□□ 0.48
UPK1BO75841 SAXO1-201ENST00000380530 1727 ntAPPRIS ALT2 TSL 2 BASIC18.05■□□□□ 0.48
UPK1BO75841 KMT5A-201ENST00000330479 3069 ntAPPRIS ALT2 TSL 1 (best) BASIC18.05■□□□□ 0.48
UPK1BO75841 FBXL3-201ENST00000355619 3503 ntAPPRIS P1 TSL 1 (best) BASIC18.05■□□□□ 0.48
UPK1BO75841 PPP5C-202ENST00000391919 1929 ntTSL 5 BASIC18.05■□□□□ 0.48
UPK1BO75841 ANKRD17-211ENST00000639793 3486 ntTSL 5 BASIC18.05■□□□□ 0.48
UPK1BO75841 EIF3J-201ENST00000261868 2569 ntAPPRIS P1 TSL 1 (best) BASIC18.05■□□□□ 0.48
UPK1BO75841 MAMSTR-202ENST00000356751 1825 ntTSL 2 BASIC18.05■□□□□ 0.48
UPK1BO75841 CCDC17-202ENST00000421127 2216 ntAPPRIS ALT2 TSL 2 BASIC18.04■□□□□ 0.48
UPK1BO75841 COMMD5-201ENST00000305103 1373 ntAPPRIS P1 TSL 1 (best) BASIC18.04■□□□□ 0.48
UPK1BO75841 USP21-201ENST00000289865 2195 ntAPPRIS P1 TSL 1 (best) BASIC18.04■□□□□ 0.48
UPK1BO75841 SLC6A9-201ENST00000357730 2168 ntTSL 1 (best) BASIC18.04■□□□□ 0.48
UPK1BO75841 MB21D1-202ENST00000370318 1917 ntTSL 1 (best) BASIC18.04■□□□□ 0.48
UPK1BO75841 AL049812.1-201ENST00000432563 2267 ntBASIC18.04■□□□□ 0.48
UPK1BO75841 CMIP-209ENST00000566513 2288 ntTSL 5 BASIC18.04■□□□□ 0.48
UPK1BO75841 SOCS2-207ENST00000549206 2072 ntAPPRIS P1 TSL 3 BASIC18.04■□□□□ 0.48
UPK1BO75841 FP700111.2-201ENST00000619190 1892 ntBASIC18.04■□□□□ 0.48
UPK1BO75841 ABHD5-205ENST00000458276 1690 ntAPPRIS P1 TSL 1 (best) BASIC18.04■□□□□ 0.48
UPK1BO75841 LMAN2-208ENST00000515209 1149 ntAPPRIS ALT2 TSL 3 BASIC18.04■□□□□ 0.48
UPK1BO75841 C11orf96-203ENST00000617612 1294 ntAPPRIS P1 BASIC18.04■□□□□ 0.48
UPK1BO75841 GDI1-215ENST00000630693 786 ntTSL 4 BASIC18.04■□□□□ 0.48
UPK1BO75841 CIRBP-225ENST00000589710 1835 ntTSL 2 BASIC18.04■□□□□ 0.48
UPK1BO75841 RIMKLB-202ENST00000357529 5830 ntAPPRIS P1 TSL 5 BASIC18.04■□□□□ 0.48
UPK1BO75841 EIF4ENIF1-202ENST00000344710 3115 ntTSL 1 (best) BASIC18.04■□□□□ 0.48
UPK1BO75841 TSHZ3-201ENST00000240587 5176 ntAPPRIS P1 TSL 1 (best) BASIC18.04■□□□□ 0.48
UPK1BO75841 ZNF668-202ENST00000394983 2717 ntAPPRIS P1 TSL 5 BASIC18.04■□□□□ 0.48
UPK1BO75841 ADORA2A-213ENST00000610595 2736 ntAPPRIS P1 TSL 2 BASIC18.04■□□□□ 0.48
UPK1BO75841 FBXO27-201ENST00000292853 2330 ntAPPRIS P2 TSL 1 (best) BASIC18.04■□□□□ 0.48
UPK1BO75841 TMEM206-201ENST00000261455 2475 ntAPPRIS P1 TSL 1 (best) BASIC18.04■□□□□ 0.48
UPK1BO75841 TOLLIP-201ENST00000263646 2283 ntTSL 5 BASIC18.03■□□□□ 0.48
UPK1BO75841 VMAC-201ENST00000339485 2254 ntAPPRIS P1 TSL 1 (best) BASIC18.03■□□□□ 0.48
UPK1BO75841 ACD-201ENST00000219251 2052 ntAPPRIS P3 TSL 2 BASIC18.03■□□□□ 0.48
UPK1BO75841 CCDC3-201ENST00000378825 2731 ntAPPRIS P3 TSL 1 (best) BASIC18.03■□□□□ 0.48
UPK1BO75841 SHANK3-203ENST00000445220 5175 ntAPPRIS ALT2 TSL 5 BASIC18.03■□□□□ 0.48
UPK1BO75841 REEP2-202ENST00000378339 2170 ntAPPRIS ALT1 TSL 1 (best) BASIC18.03■□□□□ 0.48
UPK1BO75841 DR1-201ENST00000370267 1647 ntAPPRIS P1 TSL 2 BASIC18.03■□□□□ 0.48
UPK1BO75841 MBNL3-202ENST00000370844 1643 ntTSL 1 (best) BASIC18.03■□□□□ 0.48
UPK1BO75841 ZNF280B-203ENST00000626650 5721 ntAPPRIS P1 TSL 2 BASIC18.03■□□□□ 0.48
UPK1BO75841 AL592293.1-201ENST00000502889 1188 ntBASIC18.03■□□□□ 0.48
UPK1BO75841 TMEM170A-206ENST00000569276 609 ntTSL 2 BASIC18.03■□□□□ 0.48
UPK1BO75841 ACAD8-202ENST00000374752 1797 ntTSL 2 BASIC18.03■□□□□ 0.48
UPK1BO75841 FAM72C-202ENST00000584486 2297 ntAPPRIS P1 TSL 1 (best) BASIC18.03■□□□□ 0.48
UPK1BO75841 ZNF74-203ENST00000403682 2789 ntTSL 1 (best) BASIC18.03■□□□□ 0.48
UPK1BO75841 CDH5-204ENST00000563425 1932 ntTSL 5 BASIC18.03■□□□□ 0.48
UPK1BO75841 PLCXD1-202ENST00000381663 1863 ntAPPRIS P2 TSL 5 BASIC18.03■□□□□ 0.48
UPK1BO75841 PTPA-206ENST00000358994 2664 ntAPPRIS P1 TSL 1 (best) BASIC18.03■□□□□ 0.48
UPK1BO75841 TAF7-201ENST00000313368 2334 ntAPPRIS P1 BASIC18.03■□□□□ 0.48
UPK1BO75841 ZNF622-201ENST00000308683 1699 ntAPPRIS P1 TSL 1 (best) BASIC18.03■□□□□ 0.48
UPK1BO75841 GLT8D1-206ENST00000478968 1826 ntAPPRIS P1 TSL 1 (best) BASIC18.02■□□□□ 0.48
UPK1BO75841 TM9SF1-206ENST00000528669 2425 ntTSL 5 BASIC18.02■□□□□ 0.48
UPK1BO75841 AC008764.1-201ENST00000409035 2567 ntAPPRIS P1 TSL 2 BASIC18.02■□□□□ 0.48
UPK1BO75841 EGFL8-219ENST00000333845 1310 ntAPPRIS P1 TSL 1 (best) BASIC18.02■□□□□ 0.48
UPK1BO75841 CBWD1-203ENST00000377400 1792 ntAPPRIS P1 TSL 1 (best) BASIC18.02■□□□□ 0.48
UPK1BO75841 GTF2IRD2B-208ENST00000619142 1932 ntTSL 1 (best) BASIC18.02■□□□□ 0.48
UPK1BO75841 LINC01116-201ENST00000295549 1407 ntTSL 2 BASIC18.02■□□□□ 0.48
UPK1BO75841 VEGFA-202ENST00000324450 954 ntTSL 1 (best) BASIC18.02■□□□□ 0.48
UPK1BO75841 OGG1-205ENST00000344629 1744 ntAPPRIS ALT2 TSL 1 (best) BASIC18.02■□□□□ 0.48
UPK1BO75841 VEGFA-203ENST00000372055 1286 ntTSL 1 (best) BASIC18.02■□□□□ 0.48
UPK1BO75841 CDH22-201ENST00000372262 3661 ntAPPRIS P1 TSL 1 (best) BASIC18.02■□□□□ 0.48
UPK1BO75841 SCAND1-202ENST00000373991 1727 ntAPPRIS P1 TSL 1 (best) BASIC18.02■□□□□ 0.48
UPK1BO75841 VEGFA-208ENST00000417285 1081 ntAPPRIS ALT2 TSL 1 (best) BASIC18.02■□□□□ 0.48
UPK1BO75841 VEGFA-213ENST00000482630 1146 ntTSL 1 (best) BASIC18.02■□□□□ 0.48
UPK1BO75841 MIR3648-2-201ENST00000581792 180 ntBASIC18.02■□□□□ 0.48
Retrieved 100 of 98,524 protein–RNA pairs in 101.8 ms