Protein–RNA interactions for Protein: O60832

DKC1, H/ACA ribonucleoprotein complex subunit 4, humanhuman

Known RBP eCLIP

Length 514 aa.

Download Table  
Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
DKC1O60832 HSD17B2-202ENST00000563491 487 ntTSL 310.45□□□□□ -0.744e-9■■■■□ 22.5
DKC1O60832 TNFAIP8-201ENST00000274456 795 ntAPPRIS P1 TSL 1 (best) BASIC10.26□□□□□ -0.774e-9■■■■□ 22.5
DKC1O60832 LRMDA-201ENST00000372499 899 ntAPPRIS P3 TSL 1 (best) BASIC10.24□□□□□ -0.771e-8■■■■□ 22.5
DKC1O60832 NKAPP1-202ENST00000536487 596 ntTSL 39.98□□□□□ -0.814e-9■■■■□ 22.5
DKC1O60832 SIRT5-202ENST00000379250 3727 ntTSL 1 (best)9.84□□□□□ -0.834e-9■■■■□ 22.5
DKC1O60832 SIRT5-201ENST00000359782 3797 ntTSL 2 BASIC9.77□□□□□ -0.854e-9■■■■□ 22.5
DKC1O60832 SIRT5-205ENST00000606117 3922 ntAPPRIS P1 TSL 1 (best) BASIC9.47□□□□□ -0.894e-9■■■■□ 22.5
DKC1O60832 HSD17B2-203ENST00000566213 551 ntTSL 39.12□□□□□ -0.954e-9■■■■□ 22.5
DKC1O60832 PUM1-209ENST00000480602 906 ntTSL 57.93□□□□□ -1.144e-9■■■■□ 22.5
DKC1O60832 PUM1-218ENST00000526215 586 ntTSL 27.2□□□□□ -1.264e-9■■■■□ 22.5
DKC1O60832 AGO2-201ENST00000220592 14581 ntAPPRIS P1 TSL 1 (best) BASIC5.97□□□□□ -1.454e-9■■■■□ 22.5
DKC1O60832 NDRG1-210ENST00000518480 558 ntTSL 418.38■□□□□ 0.534e-8■■■■□ 22.5
DKC1O60832 NDRG1-225ENST00000522890 581 ntTSL 517.62■□□□□ 0.414e-8■■■■□ 22.5
DKC1O60832 NDRG1-202ENST00000414097 3755 ntAPPRIS P1 TSL 2 BASIC17.07■□□□□ 0.324e-8■■■■□ 22.5
DKC1O60832 NDRG1-211ENST00000519228 729 ntTSL 416.92■□□□□ 0.34e-8■■■■□ 22.5
DKC1O60832 NDRG1-209ENST00000518176 888 ntTSL 2 BASIC15.88■□□□□ 0.134e-8■■■■□ 22.5
DKC1O60832 NDRG1-214ENST00000520230 582 ntTSL 415.07■□□□□ 04e-8■■■■□ 22.5
DKC1O60832 NDRG1-206ENST00000518010 581 ntTSL 414.98□□□□□ -0.014e-8■■■■□ 22.5
DKC1O60832 NDRG1-222ENST00000522476 1385 ntTSL 1 (best) BASIC14.6□□□□□ -0.074e-8■■■■□ 22.5
DKC1O60832 NDRG1-221ENST00000522377 1103 ntTSL 513.9□□□□□ -0.184e-8■■■■□ 22.5
DKC1O60832 NDRG1-207ENST00000518066 560 ntTSL 5 BASIC13.48□□□□□ -0.254e-8■■■■□ 22.5
DKC1O60832 NDRG1-204ENST00000517599 2918 ntTSL 213□□□□□ -0.334e-8■■■■□ 22.5
DKC1O60832 NDRG1-201ENST00000323851 3014 ntAPPRIS P1 TSL 1 (best) BASIC11.88□□□□□ -0.514e-8■■■■□ 22.5
DKC1O60832 NDRG1-229ENST00000537882 2975 ntTSL 2 BASIC11.84□□□□□ -0.514e-8■■■■□ 22.5
DKC1O60832 RPL4-216ENST00000569438 565 ntTSL 516.12■□□□□ 0.171e-22■■■■□ 22.5
DKC1O60832 RPL4-212ENST00000566622 817 ntTSL 215.2■□□□□ 0.021e-22■■■■□ 22.5
DKC1O60832 RPL4-205ENST00000564439 582 ntTSL 311.99□□□□□ -0.491e-22■■■■□ 22.5
DKC1O60832 GPC3-202ENST00000394299 2379 ntTSL 1 (best) BASIC16.34■□□□□ 0.217e-13■■■■□ 22.5
DKC1O60832 GPC3-201ENST00000370818 2568 ntAPPRIS P1 TSL 1 (best) BASIC13.87□□□□□ -0.197e-13■■■■□ 22.5
DKC1O60832 GPC3-204ENST00000631057 1581 ntTSL 1 (best) BASIC8.69□□□□□ -1.027e-13■■■■□ 22.5
DKC1O60832 STX18-AS1-206ENST00000608184 3047 ntTSL 3 BASIC9.01□□□□□ -0.976e-10■■■■□ 22.4
DKC1O60832 ABCC6-208ENST00000622290 4941 ntTSL 5 BASIC16.09■□□□□ 0.178e-8■■■■□ 22.3
DKC1O60832 ABCC6-202ENST00000456970 4137 ntTSL 215.34■□□□□ 0.058e-8■■■■□ 22.3
DKC1O60832 ABCC6-201ENST00000205557 5747 ntAPPRIS P1 TSL 1 (best) BASIC15.23■□□□□ 0.038e-8■■■■□ 22.3
DKC1O60832 SNHG14-222ENST00000557108 3210 ntTSL 1 (best)7.01□□□□□ -1.291e-7■■■■□ 22.3
DKC1O60832 SNHG17-206ENST00000436764 973 ntTSL 5 BASIC19.26■□□□□ 0.671e-323■■■■□ 22.2
DKC1O60832 SNHG17-203ENST00000417578 880 ntTSL 2 BASIC18.2■□□□□ 0.51e-323■■■■□ 22.2
DKC1O60832 SNHG17-201ENST00000413755 648 ntTSL 3 BASIC16.02■□□□□ 0.161e-323■■■■□ 22.2
DKC1O60832 SNHG17-202ENST00000414142 2102 ntTSL 215.06■□□□□ 01e-323■■■■□ 22.2
DKC1O60832 CLTCL1-212ENST00000622493 1714 ntTSL 2 BASIC15.88■□□□□ 0.132e-6■■■■□ 22.2
DKC1O60832 CLTCL1-201ENST00000412649 4635 ntTSL 214.75□□□□□ -0.052e-6■■■■□ 22.2
DKC1O60832 CLTCL1-205ENST00000538828 448 ntTSL 513.89□□□□□ -0.192e-6■■■■□ 22.2
DKC1O60832 CLTCL1-210ENST00000617926 1695 ntTSL 2 BASIC13.66□□□□□ -0.222e-6■■■■□ 22.2
DKC1O60832 CLTCL1-209ENST00000617103 4859 ntTSL 1 (best)11.68□□□□□ -0.542e-6■■■■□ 22.2
DKC1O60832 CLTCL1-202ENST00000427926 5513 ntAPPRIS P3 TSL 1 (best) BASIC11.29□□□□□ -0.62e-6■■■■□ 22.2
DKC1O60832 CLTCL1-211ENST00000621271 5313 ntAPPRIS ALT2 TSL 1 (best) BASIC11.1□□□□□ -0.632e-6■■■■□ 22.2
DKC1O60832 CLTCL1-208ENST00000615606 4994 ntTSL 1 (best)10.72□□□□□ -0.692e-6■■■■□ 22.2
DKC1O60832 MLXIPL-207ENST00000453275 690 ntTSL 522.09■■□□□ 1.132e-6■■■■□ 22.2
DKC1O60832 MLXIPL-210ENST00000476404 1921 ntTSL 217.8■□□□□ 0.442e-6■■■■□ 22.2
DKC1O60832 URB1-201ENST00000382751 10832 ntAPPRIS P1 TSL 1 (best) BASIC9.29□□□□□ -0.922e-37■■■■□ 22.2
DKC1O60832 SNORA80A-201ENST00000363922 136 ntBASIC3.17□□□□□ -1.92e-37■■■■□ 22.2
DKC1O60832 GATAD2A-209ENST00000448576 271 ntTSL 331.79■■■□□ 2.687e-13■■■■□ 22.2
DKC1O60832 GATAD2A-212ENST00000494516 640 ntTSL 222.74■■□□□ 1.237e-13■■■■□ 22.2
DKC1O60832 SLC47A1-207ENST00000573009 1317 ntTSL 221.15■□□□□ 0.983e-12■■■■□ 22.2
DKC1O60832 SLC47A1-202ENST00000395585 1998 ntTSL 1 (best) BASIC20.9■□□□□ 0.943e-12■■■■□ 22.2
DKC1O60832 SLC47A1-205ENST00000497548 1900 ntTSL 219.53■□□□□ 0.723e-12■■■■□ 22.2
DKC1O60832 SH3BP4-202ENST00000392011 5194 ntAPPRIS P1 TSL 1 (best) BASIC19.09■□□□□ 0.657e-13■■■■□ 22.2
DKC1O60832 SH3BP4-201ENST00000344528 5044 ntAPPRIS P1 TSL 1 (best) BASIC18.4■□□□□ 0.547e-13■■■■□ 22.2
DKC1O60832 SLC47A1-209ENST00000575023 2224 ntTSL 1 (best) BASIC18.27■□□□□ 0.523e-12■■■■□ 22.2
DKC1O60832 SH3BP4-203ENST00000409212 5231 ntAPPRIS P1 TSL 5 BASIC17.85■□□□□ 0.457e-13■■■■□ 22.2
DKC1O60832 SLC47A1-203ENST00000436810 1719 ntTSL 2 BASIC17.07■□□□□ 0.323e-12■■■■□ 22.2
DKC1O60832 SLC47A1-206ENST00000571335 1415 ntTSL 1 (best) BASIC15.68■□□□□ 0.13e-12■■■■□ 22.2
DKC1O60832 SLC47A1-211ENST00000575377 1362 ntTSL 215.12■□□□□ 0.013e-12■■■■□ 22.2
DKC1O60832 SLC47A1-204ENST00000495425 1066 ntTSL 214.98□□□□□ -0.013e-12■■■■□ 22.2
DKC1O60832 SLC47A1-201ENST00000270570 3280 ntAPPRIS P1 TSL 1 (best) BASIC13.72□□□□□ -0.213e-12■■■■□ 22.2
DKC1O60832 STK10-201ENST00000176763 6060 ntAPPRIS P1 TSL 1 (best) BASIC20.07■□□□□ 0.89e-7■■■■□ 22.2
DKC1O60832 LMNB2-201ENST00000325327 4671 ntAPPRIS P1 TSL 1 (best) BASIC18.74■□□□□ 0.597e-7■■■■□ 22.1
DKC1O60832 RPS8-207ENST00000485390 1115 ntTSL 1 (best)23.43■■□□□ 1.349e-67■■■■□ 22.1
DKC1O60832 RPS8-208ENST00000497035 694 ntTSL 316.51■□□□□ 0.239e-67■■■■□ 22.1
DKC1O60832 RPS8-204ENST00000470475 981 ntTSL 216.49■□□□□ 0.239e-67■■■■□ 22.1
DKC1O60832 RPS8-202ENST00000396651 881 ntAPPRIS P1 TSL 1 (best) BASIC12.89□□□□□ -0.359e-67■■■■□ 22.1
DKC1O60832 RPS8-201ENST00000372209 685 ntTSL 2 BASIC11.94□□□□□ -0.59e-67■■■■□ 22.1
DKC1O60832 SNORD46-201ENST00000364043 104 ntBASIC8.29□□□□□ -1.089e-67■■■■□ 22.1
DKC1O60832 WDR74-208ENST00000538098 548 ntTSL 419.69■□□□□ 0.741e-323■■■■□ 22
DKC1O60832 WDR74-204ENST00000525239 1736 ntAPPRIS P1 TSL 2 BASIC19.11■□□□□ 0.651e-323■■■■□ 22
DKC1O60832 RNU2-2P-201ENST00000410396 191 ntBASIC2.21□□□□□ -2.061e-323■■■■□ 22
DKC1O60832 RPL23A-208ENST00000580755 412 ntTSL 217.89■□□□□ 0.452e-35■■■■□ 22
DKC1O60832 OSBPL10-204ENST00000438237 2624 ntAPPRIS ALT2 TSL 2 BASIC21.88■■□□□ 1.091e-16■■■■□ 22
DKC1O60832 OSBPL10-205ENST00000452791 485 ntTSL 321.45■■□□□ 1.021e-16■■■■□ 22
DKC1O60832 OSBPL10-201ENST00000396556 6600 ntAPPRIS P3 TSL 1 (best) BASIC16.79■□□□□ 0.281e-16■■■■□ 22
DKC1O60832 CHN2-201ENST00000222792 3530 ntAPPRIS P1 TSL 1 (best) BASIC16.16■□□□□ 0.183e-11■■■■□ 22
DKC1O60832 CHN2-203ENST00000409350 539 ntTSL 415.42■□□□□ 0.063e-11■■■■□ 22
DKC1O60832 CHN2-213ENST00000439384 578 ntTSL 514.3□□□□□ -0.123e-11■■■■□ 22
DKC1O60832 OSBPL10-216ENST00000480671 492 ntTSL 310.59□□□□□ -0.711e-16■■■■□ 22
DKC1O60832 CHN2-220ENST00000474070 754 ntTSL 510.33□□□□□ -0.763e-11■■■■□ 22
DKC1O60832 CHN2-226ENST00000495789 725 ntTSL 1 (best) BASIC9.51□□□□□ -0.893e-11■■■■□ 22
DKC1O60832 OSBPL10-207ENST00000465626 473 ntTSL 27.32□□□□□ -1.241e-16■■■■□ 22
DKC1O60832 OSBPL10-214ENST00000479173 554 ntTSL 44.88□□□□□ -1.631e-16■■■■□ 22
DKC1O60832 RPL7A-203ENST00000426651 1057 ntTSL 522.13■■□□□ 1.131e-323■■■■□ 22
DKC1O60832 RPL7A-209ENST00000496554 947 ntTSL 220.08■□□□□ 0.811e-323■■■■□ 22
DKC1O60832 RPL7A-206ENST00000485706 743 ntTSL 213.91□□□□□ -0.181e-323■■■■□ 22
DKC1O60832 FLNB-214ENST00000493452 7402 ntTSL 1 (best) BASIC10.99□□□□□ -0.658e-8■■■■□ 22
DKC1O60832 RPL7A-205ENST00000468019 941 ntTSL 214.58□□□□□ -0.081e-79■■■■□ 21.9
DKC1O60832 RPL7A-207ENST00000489392 966 ntTSL 511.65□□□□□ -0.541e-79■■■■□ 21.9
DKC1O60832 RPL7A-201ENST00000315731 680 ntTSL 2 BASIC9.69□□□□□ -0.861e-79■■■■□ 21.9
DKC1O60832 RPL7A-202ENST00000323345 891 ntAPPRIS P1 TSL 1 (best) BASIC7.74□□□□□ -1.171e-79■■■■□ 21.9
DKC1O60832 RPL7A-204ENST00000463740 1164 ntTSL 57.23□□□□□ -1.251e-79■■■■□ 21.9
DKC1O60832 JARID2-201ENST00000341776 5755 ntAPPRIS P3 TSL 1 (best) BASIC16.6■□□□□ 0.254e-6■■■■□ 21.8
DKC1O60832 JARID2-202ENST00000397311 5595 ntAPPRIS ALT2 TSL 2 BASIC16.32■□□□□ 0.24e-6■■■■□ 21.8
DKC1O60832 EEF1B2-207ENST00000445505 515 ntTSL 520.32■□□□□ 0.841e-323■■■■□ 21.8
Retrieved 100 of 8,567 protein–RNA pairs in 263.5 ms