RNA–Protein interactions for RNA: ENST00000480602.1

PUM1-209, Transcript of pumilio RNA binding family member 1, humanhuman

TSL 5

Gene PUM1, Length 906 nt, Biotype nonsense mediated decay, Subcellular localisation Cytoplasm, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
PUM1-209ENST00000480602 NISCHQ9Y2I1 1504 aa19.79■□□□□ 0.76
PUM1-209ENST00000480602 ABCC9O60706 1549 aa19.2■□□□□ 0.66
PUM1-209ENST00000480602 DNAJC5BQ9UF47 199 aa18.91■□□□□ 0.62
PUM1-209ENST00000480602 CCDC180Q9P1Z9 1646 aa18.2■□□□□ 0.5
PUM1-209ENST00000480602 DNAJC5Q9H3Z4 198 aa18.07■□□□□ 0.48
PUM1-209ENST00000480602 RB1CC1Q8TDY2 1594 aa17.8■□□□□ 0.44
PUM1-209ENST00000480602 PABPN1Q86U42 306 aaKnown RBP eCLIP17.69■□□□□ 0.42
PUM1-209ENST00000480602 NACADO15069 1562 aa17.43■□□□□ 0.38
PUM1-209ENST00000480602 UNC13AQ9UPW8 1703 aa17.42■□□□□ 0.38
PUM1-209ENST00000480602 CECR2Q9BXF3 1484 aa17.39■□□□□ 0.37
PUM1-209ENST00000480602 BICRAQ9NZM4 1560 aa17.36■□□□□ 0.37
PUM1-209ENST00000480602 CC2D2AQ9P2K1 1620 aa17.29■□□□□ 0.36
PUM1-209ENST00000480602 DCAF8L2P0C7V8 631 aa17.07■□□□□ 0.32
PUM1-209ENST00000480602 EIF4G1Q04637 1599 aaKnown RBP17.01■□□□□ 0.31
PUM1-209ENST00000480602 SHROOM4Q9ULL8 1493 aa16.99■□□□□ 0.31
PUM1-209ENST00000480602 CUX2O14529 1486 aa16.95■□□□□ 0.3
PUM1-209ENST00000480602 MYO15BQ96JP2 1530 aa16.86■□□□□ 0.29
PUM1-209ENST00000480602 TRIM41Q8WV44 630 aa16.86■□□□□ 0.29
PUM1-209ENST00000480602 ERCC6Q03468 1493 aa16.62■□□□□ 0.25
PUM1-209ENST00000480602 SCRIBQ14160 1630 aa16.54■□□□□ 0.24
PUM1-209ENST00000480602 DCAF1Q9Y4B6 1507 aa16.28■□□□□ 0.2
PUM1-209ENST00000480602 THOC2Q8NI27 1593 aaKnown RBP16.27■□□□□ 0.2
PUM1-209ENST00000480602 NESP48681 1621 aa16.21■□□□□ 0.19
PUM1-209ENST00000480602 ZCCHC6Q5VYS8 1495 aaKnown RBP16.21■□□□□ 0.19
PUM1-209ENST00000480602 NCAPD3P42695 1498 aa16.11■□□□□ 0.17
PUM1-209ENST00000480602 AEBP2Q6ZN18 517 aaPredicted RBP16.08■□□□□ 0.16
PUM1-209ENST00000480602 SMARCA2P51531 1590 aa16.06■□□□□ 0.16
PUM1-209ENST00000480602 BAZ1AQ9NRL2 1556 aaPredicted RBP16.02■□□□□ 0.16
PUM1-209ENST00000480602 KIF21AQ7Z4S6 1674 aa15.96■□□□□ 0.15
PUM1-209ENST00000480602 OSCARQ8IYS5 282 aa15.95■□□□□ 0.14
PUM1-209ENST00000480602 ATAD2BQ9ULI0 1458 aa15.94■□□□□ 0.14
PUM1-209ENST00000480602 RIMBP3CA6NJZ7 1639 aa15.93■□□□□ 0.14
PUM1-209ENST00000480602 RIMBP3BA6NNM3 1639 aa15.93■□□□□ 0.14
PUM1-209ENST00000480602 RIMBP3Q9UFD9 1639 aa15.93■□□□□ 0.14
PUM1-209ENST00000480602 HMGXB3Q12766 1538 aa15.91■□□□□ 0.14
PUM1-209ENST00000480602 LAMC3Q9Y6N6 1575 aa15.9■□□□□ 0.14
PUM1-209ENST00000480602 PDS5BQ9NTI5 1447 aa15.83■□□□□ 0.12
PUM1-209ENST00000480602 TRHP20396 242 aaPredicted RBP15.8■□□□□ 0.12
PUM1-209ENST00000480602 WDR62O43379 1518 aa15.79■□□□□ 0.12
PUM1-209ENST00000480602 MRC2Q9UBG0 1479 aa15.79■□□□□ 0.12
PUM1-209ENST00000480602 ARHGEF11O15085 1522 aa15.77■□□□□ 0.11
PUM1-209ENST00000480602 BAZ1BQ9UIG0 1483 aaKnown RBP15.71■□□□□ 0.11
PUM1-209ENST00000480602 SMARCA4P51532 1647 aa15.66■□□□□ 0.1
PUM1-209ENST00000480602 CYB5RLQ6IPT4 315 aa15.66■□□□□ 0.1
PUM1-209ENST00000480602 ILDR1Q86SU0 546 aaPredicted RBP15.64■□□□□ 0.09
PUM1-209ENST00000480602 CADPSQ9ULU8 1353 aa15.56■□□□□ 0.08
PUM1-209ENST00000480602 ARAP1Q96P48 1450 aa15.56■□□□□ 0.08
PUM1-209ENST00000480602 PEG3Q9GZU2 1588 aa15.52■□□□□ 0.07
PUM1-209ENST00000480602 CEP164Q9UPV0 1460 aa15.52■□□□□ 0.07
PUM1-209ENST00000480602 FANCD2Q9BXW9 1451 aa15.41■□□□□ 0.06
PUM1-209ENST00000480602 URB2Q14146 1524 aaKnown RBP15.37■□□□□ 0.05
PUM1-209ENST00000480602 ZNF608Q9ULD9 1512 aaPredicted RBP15.35■□□□□ 0.05
PUM1-209ENST00000480602 RSF1Q96T23 1441 aaPredicted RBP15.34■□□□□ 0.05
PUM1-209ENST00000480602 CHD1O14646 1710 aa15.27■□□□□ 0.04
PUM1-209ENST00000480602 MROH2BQ7Z745 1585 aa15.25■□□□□ 0.03
PUM1-209ENST00000480602 IFT140Q96RY7 1462 aa15.24■□□□□ 0.03
PUM1-209ENST00000480602 EIF4G3O43432 1585 aaKnown RBP15.21■□□□□ 0.03
PUM1-209ENST00000480602 CFTRP13569 1480 aa15.19■□□□□ 0.02
PUM1-209ENST00000480602 FBLN2P98095 1184 aa15.11■□□□□ 0.01
PUM1-209ENST00000480602 CLASP1Q7Z460 1538 aa15.09■□□□□ 0.01
PUM1-209ENST00000480602 KDM4FA0A1W2PPD8 638 aa15.07■□□□□ 0
PUM1-209ENST00000480602 AQRO60306 1485 aaKnown RBP eCLIP15.06■□□□□ 08e-9■■■□□ 19.2
PUM1-209ENST00000480602 WIZO95785 1651 aa15.01□□□□□ -0.01
PUM1-209ENST00000480602 TOPBP1Q92547 1522 aa15.01□□□□□ -0.01
PUM1-209ENST00000480602 GAPVD1Q14C86 1478 aa14.99□□□□□ -0.01
PUM1-209ENST00000480602 TARBP1Q13395 1621 aaKnown RBP14.96□□□□□ -0.01
PUM1-209ENST00000480602 PRDM2Q13029 1718 aa14.95□□□□□ -0.02
PUM1-209ENST00000480602 SYNJ1O43426 1573 aa14.95□□□□□ -0.02
PUM1-209ENST00000480602 KIF13AQ9H1H9 1805 aa14.93□□□□□ -0.02
PUM1-209ENST00000480602 ERCC6L2Q5T890 1561 aa14.92□□□□□ -0.02
PUM1-209ENST00000480602 SNAPC4Q5SXM2 1469 aa14.89□□□□□ -0.03
PUM1-209ENST00000480602 HECW2Q9P2P5 1572 aa14.86□□□□□ -0.03
PUM1-209ENST00000480602 FBXO41Q8TF61 875 aa14.86□□□□□ -0.03
PUM1-209ENST00000480602 ABCC8Q09428 1581 aa14.85□□□□□ -0.03
PUM1-209ENST00000480602 DNMBPQ6XZF7 1577 aa14.85□□□□□ -0.03
PUM1-209ENST00000480602 CHMP7Q8WUX9 453 aaPredicted RBP14.82□□□□□ -0.04
PUM1-209ENST00000480602 LMTK3Q96Q04 1460 aa14.81□□□□□ -0.04
PUM1-209ENST00000480602 POLA1P09884 1462 aaPredicted RBP14.79□□□□□ -0.04
PUM1-209ENST00000480602 TDRD9Q8NDG6 1382 aaKnown RBP14.79□□□□□ -0.04
PUM1-209ENST00000480602 MAGI1Q96QZ7 1491 aaPredicted RBP14.78□□□□□ -0.04
PUM1-209ENST00000480602 KDM6BO15054 1643 aa14.77□□□□□ -0.05
PUM1-209ENST00000480602 TOP2AP11388 1531 aaKnown RBP14.76□□□□□ -0.05
PUM1-209ENST00000480602 SYNJ2O15056 1496 aa14.76□□□□□ -0.05
PUM1-209ENST00000480602 RAD54L2Q9Y4B4 1467 aa14.76□□□□□ -0.05
PUM1-209ENST00000480602 ADGRL1O94910 1474 aa14.72□□□□□ -0.05
PUM1-209ENST00000480602 WDR97A6NE52 1622 aa14.71□□□□□ -0.05
PUM1-209ENST00000480602 FAM69CQ0P6D2 419 aa14.7□□□□□ -0.06
PUM1-209ENST00000480602 ABCC10Q5T3U5 1492 aa14.69□□□□□ -0.06
PUM1-209ENST00000480602 SOCS7O14512 581 aa14.69□□□□□ -0.06
PUM1-209ENST00000480602 SOGA1O94964 1423 aa14.67□□□□□ -0.06
PUM1-209ENST00000480602 GRIN2BQ13224 1484 aa14.67□□□□□ -0.06
PUM1-209ENST00000480602 DIP2BQ9P265 1576 aa14.65□□□□□ -0.06
PUM1-209ENST00000480602 ILDR2Q71H61 639 aa14.64□□□□□ -0.07
PUM1-209ENST00000480602 CEP170Q5SW79 1584 aa14.64□□□□□ -0.07
PUM1-209ENST00000480602 CCDC88BA6NC98 1476 aa14.59□□□□□ -0.07
PUM1-209ENST00000480602 MAPKBP1O60336 1514 aa14.58□□□□□ -0.08
PUM1-209ENST00000480602 TSPOAP1O95153 1857 aa14.57□□□□□ -0.08
PUM1-209ENST00000480602 PBRM1Q86U86 1689 aa14.57□□□□□ -0.08
PUM1-209ENST00000480602 FGD5Q6ZNL6 1462 aa14.56□□□□□ -0.08
PUM1-209ENST00000480602 SHROOM2Q13796 1616 aa14.55□□□□□ -0.08
Retrieved 100 of 20,778 RNA–protein pairs in 14.3 ms