RNA–Protein interactions for RNA: ENST00000573009.1

SLC47A1-207, Transcript of solute carrier family 47 member 1, humanhuman

TSL 2

Gene SLC47A1, Length 1,317 nt, Biotype retained intron, Subcellular localisation Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SLC47A1-207ENST00000573009 NISCHQ9Y2I1 1504 aa46.57■■■■■ 5.05
SLC47A1-207ENST00000573009 CCDC180Q9P1Z9 1646 aa41.75■■■■■ 4.27
SLC47A1-207ENST00000573009 ABCC9O60706 1549 aa41.71■■■■■ 4.27
SLC47A1-207ENST00000573009 RB1CC1Q8TDY2 1594 aa39.74■■■■□ 3.95
SLC47A1-207ENST00000573009 DCAF8L2P0C7V8 631 aa39.6■■■■□ 3.93
SLC47A1-207ENST00000573009 NACADO15069 1562 aa39.43■■■■□ 3.9
SLC47A1-207ENST00000573009 PABPN1Q86U42 306 aaKnown RBP eCLIP38.89■■■■□ 3.82
SLC47A1-207ENST00000573009 DNAJC5BQ9UF47 199 aa38.85■■■■□ 3.81
SLC47A1-207ENST00000573009 MYO15BQ96JP2 1530 aa38.81■■■■□ 3.8
SLC47A1-207ENST00000573009 UNC13AQ9UPW8 1703 aa38.81■■■■□ 3.8
SLC47A1-207ENST00000573009 ZCCHC6Q5VYS8 1495 aaKnown RBP38.6■■■■□ 3.77
SLC47A1-207ENST00000573009 BICRAQ9NZM4 1560 aa38.43■■■■□ 3.74
SLC47A1-207ENST00000573009 DCAF1Q9Y4B6 1507 aa38.4■■■■□ 3.74
SLC47A1-207ENST00000573009 SCRIBQ14160 1630 aa38.17■■■■□ 3.7
SLC47A1-207ENST00000573009 SHROOM4Q9ULL8 1493 aa37.93■■■■□ 3.66
SLC47A1-207ENST00000573009 CC2D2AQ9P2K1 1620 aa37.64■■■■□ 3.62
SLC47A1-207ENST00000573009 EIF4G1Q04637 1599 aaKnown RBP37.56■■■■□ 3.6
SLC47A1-207ENST00000573009 CECR2Q9BXF3 1484 aa37.51■■■■□ 3.6
SLC47A1-207ENST00000573009 NCAPD3P42695 1498 aa36.34■■■■□ 3.41
SLC47A1-207ENST00000573009 SMARCA4P51532 1647 aa36.34■■■■□ 3.41
SLC47A1-207ENST00000573009 ATAD2BQ9ULI0 1458 aa36.29■■■■□ 3.4
SLC47A1-207ENST00000573009 SMARCA2P51531 1590 aa36.26■■■■□ 3.4
SLC47A1-207ENST00000573009 BAZ1AQ9NRL2 1556 aaPredicted RBP36.2■■■■□ 3.39
SLC47A1-207ENST00000573009 HMGXB3Q12766 1538 aa36.12■■■■□ 3.37
SLC47A1-207ENST00000573009 ERCC6Q03468 1493 aa36.08■■■■□ 3.37
SLC47A1-207ENST00000573009 BAZ1BQ9UIG0 1483 aaKnown RBP36.06■■■■□ 3.36
SLC47A1-207ENST00000573009 MROH2BQ7Z745 1585 aa35.9■■■■□ 3.34
SLC47A1-207ENST00000573009 PEG3Q9GZU2 1588 aa35.86■■■■□ 3.33
SLC47A1-207ENST00000573009 NESP48681 1621 aa35.82■■■■□ 3.32
SLC47A1-207ENST00000573009 CUX2O14529 1486 aa35.82■■■■□ 3.32
SLC47A1-207ENST00000573009 DNAJC5Q9H3Z4 198 aa35.6■■■■□ 3.29
SLC47A1-207ENST00000573009 LAMC3Q9Y6N6 1575 aa35.6■■■■□ 3.29
SLC47A1-207ENST00000573009 WIZO95785 1651 aa35.55■■■■□ 3.28
SLC47A1-207ENST00000573009 PDS5BQ9NTI5 1447 aa35.43■■■■□ 3.26
SLC47A1-207ENST00000573009 KIF21AQ7Z4S6 1674 aa35.41■■■■□ 3.26
SLC47A1-207ENST00000573009 THOC2Q8NI27 1593 aaKnown RBP35.38■■■■□ 3.25
SLC47A1-207ENST00000573009 CADPSQ9ULU8 1353 aa35.32■■■■□ 3.24
SLC47A1-207ENST00000573009 RSF1Q96T23 1441 aaPredicted RBP35.2■■■■□ 3.22
SLC47A1-207ENST00000573009 MRC2Q9UBG0 1479 aa35.08■■■■□ 3.21
SLC47A1-207ENST00000573009 TOP2AP11388 1531 aaKnown RBP35.06■■■■□ 3.2
SLC47A1-207ENST00000573009 CEP164Q9UPV0 1460 aa35.02■■■■□ 3.2
SLC47A1-207ENST00000573009 FANCD2Q9BXW9 1451 aa34.96■■■■□ 3.19
SLC47A1-207ENST00000573009 WDR62O43379 1518 aa34.92■■■■□ 3.18
SLC47A1-207ENST00000573009 CFTRP13569 1480 aa34.9■■■■□ 3.18
SLC47A1-207ENST00000573009 PRDM2Q13029 1718 aa34.67■■■■□ 3.14
SLC47A1-207ENST00000573009 CCDC88BA6NC98 1476 aa34.67■■■■□ 3.14
SLC47A1-207ENST00000573009 URB2Q14146 1524 aaKnown RBP34.6■■■■□ 3.13
SLC47A1-207ENST00000573009 TRIM41Q8WV44 630 aa34.35■■■■□ 3.09
SLC47A1-207ENST00000573009 OSCARQ8IYS5 282 aa34.3■■■■□ 3.08
SLC47A1-207ENST00000573009 TOPBP1Q92547 1522 aa34.28■■■■□ 3.08
SLC47A1-207ENST00000573009 IFT140Q96RY7 1462 aa34.26■■■■□ 3.08
SLC47A1-207ENST00000573009 ABCC8Q09428 1581 aa34.25■■■■□ 3.07
SLC47A1-207ENST00000573009 DNMBPQ6XZF7 1577 aa34.19■■■■□ 3.06
SLC47A1-207ENST00000573009 ZNF608Q9ULD9 1512 aaPredicted RBP34.17■■■■□ 3.06
SLC47A1-207ENST00000573009 EIF4G3O43432 1585 aaKnown RBP34.03■■■■□ 3.04
SLC47A1-207ENST00000573009 SUPT5HO00267 1087 aaKnown RBP34.03■■■■□ 3.04
SLC47A1-207ENST00000573009 AQRO60306 1485 aaKnown RBP eCLIP33.93■■■■□ 3.02
SLC47A1-207ENST00000573009 POLA1P09884 1462 aaPredicted RBP33.93■■■■□ 3.02
SLC47A1-207ENST00000573009 TARBP1Q13395 1621 aaKnown RBP33.92■■■■□ 3.02
SLC47A1-207ENST00000573009 FBLN2P98095 1184 aa33.88■■■■□ 3.01
SLC47A1-207ENST00000573009 SOGA1O94964 1423 aa33.85■■■■□ 3.01
SLC47A1-207ENST00000573009 RAD54L2Q9Y4B4 1467 aa33.85■■■■□ 3.01
SLC47A1-207ENST00000573009 CHD1O14646 1710 aa33.79■■■■□ 3
SLC47A1-207ENST00000573009 FGD5Q6ZNL6 1462 aa33.79■■■■□ 3
SLC47A1-207ENST00000573009 RIMBP3CA6NJZ7 1639 aa33.79■■■■□ 3
SLC47A1-207ENST00000573009 RIMBP3BA6NNM3 1639 aa33.79■■■■□ 3
SLC47A1-207ENST00000573009 RIMBP3Q9UFD9 1639 aa33.79■■■■□ 3
SLC47A1-207ENST00000573009 TDRD9Q8NDG6 1382 aaKnown RBP33.76■■■■□ 3
SLC47A1-207ENST00000573009 CUX1P39880 1505 aa33.73■■■□□ 2.99
SLC47A1-207ENST00000573009 ARHGEF11O15085 1522 aa33.67■■■□□ 2.98
SLC47A1-207ENST00000573009 WDR97A6NE52 1622 aa33.61■■■□□ 2.97
SLC47A1-207ENST00000573009 SNAPC4Q5SXM2 1469 aa33.6■■■□□ 2.97
SLC47A1-207ENST00000573009 CHMP7Q8WUX9 453 aaPredicted RBP33.57■■■□□ 2.97
SLC47A1-207ENST00000573009 CYB5RLQ6IPT4 315 aa33.53■■■□□ 2.96
SLC47A1-207ENST00000573009 GRIN2BQ13224 1484 aa33.51■■■□□ 2.96
SLC47A1-207ENST00000573009 MAGI1Q96QZ7 1491 aaPredicted RBP33.47■■■□□ 2.95
SLC47A1-207ENST00000573009 PBRM1Q86U86 1689 aa33.44■■■□□ 2.94
SLC47A1-207ENST00000573009 GAPVD1Q14C86 1478 aa33.43■■■□□ 2.94
SLC47A1-207ENST00000573009 SYNJ1O43426 1573 aa33.41■■■□□ 2.94
SLC47A1-207ENST00000573009 SYNJ2O15056 1496 aa33.37■■■□□ 2.93
SLC47A1-207ENST00000573009 ABCA10Q8WWZ4 1543 aa33.35■■■□□ 2.93
SLC47A1-207ENST00000573009 ARAP1Q96P48 1450 aa33.32■■■□□ 2.92
SLC47A1-207ENST00000573009 WRNQ14191 1432 aaPredicted RBP eCLIP33.32■■■□□ 2.92
SLC47A1-207ENST00000573009 ABCA5Q8WWZ7 1642 aa33.29■■■□□ 2.92
SLC47A1-207ENST00000573009 CLASP1Q7Z460 1538 aa33.28■■■□□ 2.92
SLC47A1-207ENST00000573009 TOP2BQ02880 1626 aa33.25■■■□□ 2.91
SLC47A1-207ENST00000573009 BIVM-ERCC5R4GMW8 1640 aa33.25■■■□□ 2.91
SLC47A1-207ENST00000573009 TRHP20396 242 aaPredicted RBP33.25■■■□□ 2.91
SLC47A1-207ENST00000573009 GRIN2AQ12879 1464 aa33.06■■■□□ 2.88
SLC47A1-207ENST00000573009 ADAMTS12P58397 1594 aa33.06■■■□□ 2.88
SLC47A1-207ENST00000573009 FHAD1B1AJZ9 1412 aa32.98■■■□□ 2.87
SLC47A1-207ENST00000573009 ERICH3Q5RHP9 1530 aa32.96■■■□□ 2.87
SLC47A1-207ENST00000573009 CEP170Q5SW79 1584 aa32.93■■■□□ 2.86
SLC47A1-207ENST00000573009 NUP160Q12769 1436 aa32.87■■■□□ 2.85
SLC47A1-207ENST00000573009 ERCC6L2Q5T890 1561 aa32.82■■■□□ 2.84
SLC47A1-207ENST00000573009 SHROOM2Q13796 1616 aa32.72■■■□□ 2.83
SLC47A1-207ENST00000573009 KIF27Q86VH2 1401 aa32.67■■■□□ 2.82
SLC47A1-207ENST00000573009 JPH4Q96JJ6 628 aa32.67■■■□□ 2.82
SLC47A1-207ENST00000573009 PRG4Q92954 1404 aaPredicted RBP32.67■■■□□ 2.82
SLC47A1-207ENST00000573009 RUSC2Q8N2Y8 1516 aa32.58■■■□□ 2.81
Retrieved 100 of 20,778 RNA–protein pairs in 8.7 ms