RNA–Protein interactions for RNA: ENST00000580755.1

RPL23A-208, Transcript of ribosomal protein L23a, humanhuman

TSL 2

Gene RPL23A, Length 412 nt, Biotype retained intron, Subcellular localisation Cytosol .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
RPL23A-208ENST00000580755 NISCHQ9Y2I1 1504 aa40.2■■■■■ 4.03
RPL23A-208ENST00000580755 ABCC9O60706 1549 aa37.74■■■■□ 3.63
RPL23A-208ENST00000580755 CCDC180Q9P1Z9 1646 aa36.61■■■■□ 3.45
RPL23A-208ENST00000580755 DNAJC5BQ9UF47 199 aa36.48■■■■□ 3.43
RPL23A-208ENST00000580755 RB1CC1Q8TDY2 1594 aa35.45■■■■□ 3.27
RPL23A-208ENST00000580755 NACADO15069 1562 aa34.9■■■■□ 3.18
RPL23A-208ENST00000580755 PABPN1Q86U42 306 aaKnown RBP eCLIP34.85■■■■□ 3.17
RPL23A-208ENST00000580755 UNC13AQ9UPW8 1703 aa34.58■■■■□ 3.13
RPL23A-208ENST00000580755 DNAJC5Q9H3Z4 198 aa34.55■■■■□ 3.12
RPL23A-208ENST00000580755 BICRAQ9NZM4 1560 aa34.42■■■■□ 3.1
RPL23A-208ENST00000580755 DCAF8L2P0C7V8 631 aa34.21■■■■□ 3.07
RPL23A-208ENST00000580755 CECR2Q9BXF3 1484 aa34.19■■■■□ 3.06
RPL23A-208ENST00000580755 CC2D2AQ9P2K1 1620 aa34.07■■■■□ 3.04
RPL23A-208ENST00000580755 MYO15BQ96JP2 1530 aa34.04■■■■□ 3.04
RPL23A-208ENST00000580755 SHROOM4Q9ULL8 1493 aa33.99■■■■□ 3.03
RPL23A-208ENST00000580755 EIF4G1Q04637 1599 aaKnown RBP33.71■■■□□ 2.99
RPL23A-208ENST00000580755 ZCCHC6Q5VYS8 1495 aaKnown RBP33.28■■■□□ 2.92
RPL23A-208ENST00000580755 DCAF1Q9Y4B6 1507 aa33.25■■■□□ 2.91
RPL23A-208ENST00000580755 CUX2O14529 1486 aa33.18■■■□□ 2.9
RPL23A-208ENST00000580755 SCRIBQ14160 1630 aa33.17■■■□□ 2.9
RPL23A-208ENST00000580755 ERCC6Q03468 1493 aa32.74■■■□□ 2.83
RPL23A-208ENST00000580755 TRIM41Q8WV44 630 aa32.41■■■□□ 2.78
RPL23A-208ENST00000580755 NCAPD3P42695 1498 aa32.22■■■□□ 2.75
RPL23A-208ENST00000580755 THOC2Q8NI27 1593 aaKnown RBP32.07■■■□□ 2.72
RPL23A-208ENST00000580755 NESP48681 1621 aa32.04■■■□□ 2.72
RPL23A-208ENST00000580755 ATAD2BQ9ULI0 1458 aa31.9■■■□□ 2.7
RPL23A-208ENST00000580755 HMGXB3Q12766 1538 aa31.9■■■□□ 2.7
RPL23A-208ENST00000580755 SMARCA2P51531 1590 aa31.79■■■□□ 2.68
RPL23A-208ENST00000580755 LAMC3Q9Y6N6 1575 aa31.72■■■□□ 2.67
RPL23A-208ENST00000580755 KIF21AQ7Z4S6 1674 aa31.62■■■□□ 2.65
RPL23A-208ENST00000580755 PDS5BQ9NTI5 1447 aa31.56■■■□□ 2.64
RPL23A-208ENST00000580755 SMARCA4P51532 1647 aa31.55■■■□□ 2.64
RPL23A-208ENST00000580755 BAZ1BQ9UIG0 1483 aaKnown RBP31.53■■■□□ 2.64
RPL23A-208ENST00000580755 BAZ1AQ9NRL2 1556 aaPredicted RBP31.49■■■□□ 2.63
RPL23A-208ENST00000580755 MRC2Q9UBG0 1479 aa31.36■■■□□ 2.61
RPL23A-208ENST00000580755 WDR62O43379 1518 aa31.34■■■□□ 2.61
RPL23A-208ENST00000580755 OSCARQ8IYS5 282 aa31.34■■■□□ 2.61
RPL23A-208ENST00000580755 PEG3Q9GZU2 1588 aa31.3■■■□□ 2.6
RPL23A-208ENST00000580755 CADPSQ9ULU8 1353 aa31.14■■■□□ 2.58
RPL23A-208ENST00000580755 RIMBP3CA6NJZ7 1639 aa31.12■■■□□ 2.57
RPL23A-208ENST00000580755 RIMBP3BA6NNM3 1639 aa31.12■■■□□ 2.57
RPL23A-208ENST00000580755 RIMBP3Q9UFD9 1639 aa31.12■■■□□ 2.57
RPL23A-208ENST00000580755 CEP164Q9UPV0 1460 aa30.97■■■□□ 2.55
RPL23A-208ENST00000580755 MROH2BQ7Z745 1585 aa30.94■■■□□ 2.54
RPL23A-208ENST00000580755 ARHGEF11O15085 1522 aa30.9■■■□□ 2.54
RPL23A-208ENST00000580755 AEBP2Q6ZN18 517 aaPredicted RBP30.84■■■□□ 2.53
RPL23A-208ENST00000580755 FANCD2Q9BXW9 1451 aa30.79■■■□□ 2.52
RPL23A-208ENST00000580755 TRHP20396 242 aaPredicted RBP30.74■■■□□ 2.51
RPL23A-208ENST00000580755 CYB5RLQ6IPT4 315 aa30.65■■■□□ 2.5
RPL23A-208ENST00000580755 URB2Q14146 1524 aaKnown RBP30.61■■■□□ 2.49
RPL23A-208ENST00000580755 CFTRP13569 1480 aa30.53■■■□□ 2.48
RPL23A-208ENST00000580755 WIZO95785 1651 aa30.52■■■□□ 2.48
RPL23A-208ENST00000580755 ARAP1Q96P48 1450 aa30.5■■■□□ 2.47
RPL23A-208ENST00000580755 ZNF608Q9ULD9 1512 aaPredicted RBP30.42■■■□□ 2.46
RPL23A-208ENST00000580755 IFT140Q96RY7 1462 aa30.41■■■□□ 2.46
RPL23A-208ENST00000580755 RSF1Q96T23 1441 aaPredicted RBP30.34■■■□□ 2.45
RPL23A-208ENST00000580755 EIF4G3O43432 1585 aaKnown RBP30.25■■■□□ 2.43
RPL23A-208ENST00000580755 CHD1O14646 1710 aa30.24■■■□□ 2.43
RPL23A-208ENST00000580755 TOP2AP11388 1531 aaKnown RBP30.18■■■□□ 2.42
RPL23A-208ENST00000580755 PRDM2Q13029 1718 aa30.15■■■□□ 2.42
RPL23A-208ENST00000580755 TOPBP1Q92547 1522 aa30.06■■■□□ 2.4
RPL23A-208ENST00000580755 FBLN2P98095 1184 aa29.98■■■□□ 2.39
RPL23A-208ENST00000580755 ABCC8Q09428 1581 aa29.97■■■□□ 2.39
RPL23A-208ENST00000580755 AQRO60306 1485 aaKnown RBP eCLIP29.96■■■□□ 2.392e-8■■■■□ 21.7
RPL23A-208ENST00000580755 CLASP1Q7Z460 1538 aa29.91■■■□□ 2.38
RPL23A-208ENST00000580755 TARBP1Q13395 1621 aaKnown RBP29.9■■■□□ 2.38
RPL23A-208ENST00000580755 DNMBPQ6XZF7 1577 aa29.87■■■□□ 2.37
RPL23A-208ENST00000580755 CCDC88BA6NC98 1476 aa29.85■■■□□ 2.37
RPL23A-208ENST00000580755 SYNJ1O43426 1573 aa29.78■■■□□ 2.36
RPL23A-208ENST00000580755 ILDR1Q86SU0 546 aaPredicted RBP29.69■■■□□ 2.34
RPL23A-208ENST00000580755 POLA1P09884 1462 aaPredicted RBP29.68■■■□□ 2.34
RPL23A-208ENST00000580755 GAPVD1Q14C86 1478 aa29.67■■■□□ 2.34
RPL23A-208ENST00000580755 SNAPC4Q5SXM2 1469 aa29.67■■■□□ 2.34
RPL23A-208ENST00000580755 WDR97A6NE52 1622 aa29.62■■■□□ 2.33
RPL23A-208ENST00000580755 CHMP7Q8WUX9 453 aaPredicted RBP29.6■■■□□ 2.33
RPL23A-208ENST00000580755 MAGI1Q96QZ7 1491 aaPredicted RBP29.6■■■□□ 2.33
RPL23A-208ENST00000580755 TDRD9Q8NDG6 1382 aaKnown RBP29.56■■■□□ 2.32
RPL23A-208ENST00000580755 RAD54L2Q9Y4B4 1467 aa29.53■■■□□ 2.32
RPL23A-208ENST00000580755 SYNJ2O15056 1496 aa29.49■■■□□ 2.31
RPL23A-208ENST00000580755 SOGA1O94964 1423 aa29.48■■■□□ 2.31
RPL23A-208ENST00000580755 GRIN2BQ13224 1484 aa29.42■■■□□ 2.3
RPL23A-208ENST00000580755 KIF13AQ9H1H9 1805 aa29.35■■■□□ 2.29
RPL23A-208ENST00000580755 FGD5Q6ZNL6 1462 aa29.29■■■□□ 2.28
RPL23A-208ENST00000580755 ERCC6L2Q5T890 1561 aa29.26■■■□□ 2.27
RPL23A-208ENST00000580755 KDM4FA0A1W2PPD8 638 aa29.24■■■□□ 2.27
RPL23A-208ENST00000580755 PBRM1Q86U86 1689 aa29.21■■■□□ 2.27
RPL23A-208ENST00000580755 CEP170Q5SW79 1584 aa29.14■■■□□ 2.26
RPL23A-208ENST00000580755 CUX1P39880 1505 aa29.08■■■□□ 2.25
RPL23A-208ENST00000580755 SHROOM2Q13796 1616 aa29.05■■■□□ 2.24
RPL23A-208ENST00000580755 GRIN2AQ12879 1464 aa29.04■■■□□ 2.24
RPL23A-208ENST00000580755 ABCC10Q5T3U5 1492 aa29.04■■■□□ 2.24
RPL23A-208ENST00000580755 KDM6BO15054 1643 aa29.03■■■□□ 2.24
RPL23A-208ENST00000580755 NUP160Q12769 1436 aa29.02■■■□□ 2.24
RPL23A-208ENST00000580755 FAM69CQ0P6D2 419 aa29■■■□□ 2.23
RPL23A-208ENST00000580755 ABCA5Q8WWZ7 1642 aa29■■■□□ 2.23
RPL23A-208ENST00000580755 DIP2BQ9P265 1576 aa28.95■■■□□ 2.22
RPL23A-208ENST00000580755 MAPKBP1O60336 1514 aa28.93■■■□□ 2.22
RPL23A-208ENST00000580755 ABCA10Q8WWZ4 1543 aa28.92■■■□□ 2.22
RPL23A-208ENST00000580755 ADAMTS12P58397 1594 aa28.88■■■□□ 2.21
RPL23A-208ENST00000580755 HECW2Q9P2P5 1572 aa28.8■■■□□ 2.2
Retrieved 100 of 20,778 RNA–protein pairs in 12.2 ms