RNA–Protein interactions for RNA: ENST00000575377.5

SLC47A1-211, Transcript of solute carrier family 47 member 1, humanhuman

TSL 2

Gene SLC47A1, Length 1,362 nt, Biotype retained intron, Subcellular localisation Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SLC47A1-211ENST00000575377 NISCHQ9Y2I1 1504 aa33.06■■■□□ 2.88
SLC47A1-211ENST00000575377 CCDC180Q9P1Z9 1646 aa29.5■■■□□ 2.31
SLC47A1-211ENST00000575377 ABCC9O60706 1549 aa29.15■■■□□ 2.26
SLC47A1-211ENST00000575377 RB1CC1Q8TDY2 1594 aa27.89■■■□□ 2.06
SLC47A1-211ENST00000575377 DCAF8L2P0C7V8 631 aa27.86■■■□□ 2.05
SLC47A1-211ENST00000575377 NACADO15069 1562 aa27.79■■■□□ 2.04
SLC47A1-211ENST00000575377 MYO15BQ96JP2 1530 aa27.49■■□□□ 1.99
SLC47A1-211ENST00000575377 ZCCHC6Q5VYS8 1495 aaKnown RBP27.46■■□□□ 1.99
SLC47A1-211ENST00000575377 UNC13AQ9UPW8 1703 aa27.35■■□□□ 1.97
SLC47A1-211ENST00000575377 DCAF1Q9Y4B6 1507 aa27.3■■□□□ 1.96
SLC47A1-211ENST00000575377 PABPN1Q86U42 306 aaKnown RBP eCLIP27.23■■□□□ 1.95
SLC47A1-211ENST00000575377 BICRAQ9NZM4 1560 aa27.06■■□□□ 1.92
SLC47A1-211ENST00000575377 DNAJC5BQ9UF47 199 aa26.99■■□□□ 1.91
SLC47A1-211ENST00000575377 SCRIBQ14160 1630 aa26.95■■□□□ 1.9
SLC47A1-211ENST00000575377 SHROOM4Q9ULL8 1493 aa26.67■■□□□ 1.86
SLC47A1-211ENST00000575377 EIF4G1Q04637 1599 aaKnown RBP26.37■■□□□ 1.81
SLC47A1-211ENST00000575377 CC2D2AQ9P2K1 1620 aa26.35■■□□□ 1.81
SLC47A1-211ENST00000575377 CECR2Q9BXF3 1484 aa26.2■■□□□ 1.79
SLC47A1-211ENST00000575377 SMARCA4P51532 1647 aa25.73■■□□□ 1.71
SLC47A1-211ENST00000575377 BAZ1AQ9NRL2 1556 aaPredicted RBP25.64■■□□□ 1.7
SLC47A1-211ENST00000575377 NCAPD3P42695 1498 aa25.63■■□□□ 1.69
SLC47A1-211ENST00000575377 ATAD2BQ9ULI0 1458 aa25.63■■□□□ 1.69
SLC47A1-211ENST00000575377 SMARCA2P51531 1590 aa25.58■■□□□ 1.69
SLC47A1-211ENST00000575377 MROH2BQ7Z745 1585 aa25.49■■□□□ 1.67
SLC47A1-211ENST00000575377 HMGXB3Q12766 1538 aa25.48■■□□□ 1.67
SLC47A1-211ENST00000575377 PEG3Q9GZU2 1588 aa25.43■■□□□ 1.66
SLC47A1-211ENST00000575377 BAZ1BQ9UIG0 1483 aaKnown RBP25.42■■□□□ 1.66
SLC47A1-211ENST00000575377 WIZO95785 1651 aa25.25■■□□□ 1.63
SLC47A1-211ENST00000575377 NESP48681 1621 aa25.15■■□□□ 1.62
SLC47A1-211ENST00000575377 ERCC6Q03468 1493 aa25.14■■□□□ 1.62
SLC47A1-211ENST00000575377 RSF1Q96T23 1441 aaPredicted RBP25.1■■□□□ 1.61
SLC47A1-211ENST00000575377 LAMC3Q9Y6N6 1575 aa25.02■■□□□ 1.6
SLC47A1-211ENST00000575377 CUX2O14529 1486 aa24.91■■□□□ 1.58
SLC47A1-211ENST00000575377 TOP2AP11388 1531 aaKnown RBP24.9■■□□□ 1.58
SLC47A1-211ENST00000575377 CADPSQ9ULU8 1353 aa24.9■■□□□ 1.58
SLC47A1-211ENST00000575377 KIF21AQ7Z4S6 1674 aa24.88■■□□□ 1.57
SLC47A1-211ENST00000575377 PDS5BQ9NTI5 1447 aa24.87■■□□□ 1.57
SLC47A1-211ENST00000575377 THOC2Q8NI27 1593 aaKnown RBP24.79■■□□□ 1.56
SLC47A1-211ENST00000575377 CFTRP13569 1480 aa24.68■■□□□ 1.54
SLC47A1-211ENST00000575377 CCDC88BA6NC98 1476 aa24.65■■□□□ 1.54
SLC47A1-211ENST00000575377 FANCD2Q9BXW9 1451 aa24.62■■□□□ 1.53
SLC47A1-211ENST00000575377 MRC2Q9UBG0 1479 aa24.62■■□□□ 1.53
SLC47A1-211ENST00000575377 CEP164Q9UPV0 1460 aa24.61■■□□□ 1.53
SLC47A1-211ENST00000575377 PRDM2Q13029 1718 aa24.55■■□□□ 1.52
SLC47A1-211ENST00000575377 WDR62O43379 1518 aa24.53■■□□□ 1.52
SLC47A1-211ENST00000575377 DNAJC5Q9H3Z4 198 aa24.49■■□□□ 1.51
SLC47A1-211ENST00000575377 URB2Q14146 1524 aaKnown RBP24.39■■□□□ 1.49
SLC47A1-211ENST00000575377 SUPT5HO00267 1087 aaKnown RBP24.39■■□□□ 1.49
SLC47A1-211ENST00000575377 TOPBP1Q92547 1522 aa24.2■■□□□ 1.46
SLC47A1-211ENST00000575377 ABCC8Q09428 1581 aa24.17■■□□□ 1.46
SLC47A1-211ENST00000575377 DNMBPQ6XZF7 1577 aa24.15■■□□□ 1.46
SLC47A1-211ENST00000575377 IFT140Q96RY7 1462 aa24.09■■□□□ 1.45
SLC47A1-211ENST00000575377 ZNF608Q9ULD9 1512 aaPredicted RBP24.03■■□□□ 1.44
SLC47A1-211ENST00000575377 POLA1P09884 1462 aaPredicted RBP23.97■■□□□ 1.43
SLC47A1-211ENST00000575377 TARBP1Q13395 1621 aaKnown RBP23.95■■□□□ 1.42
SLC47A1-211ENST00000575377 CUX1P39880 1505 aa23.92■■□□□ 1.42
SLC47A1-211ENST00000575377 EIF4G3O43432 1585 aaKnown RBP23.92■■□□□ 1.42
SLC47A1-211ENST00000575377 RAD54L2Q9Y4B4 1467 aa23.91■■□□□ 1.42
SLC47A1-211ENST00000575377 OSCARQ8IYS5 282 aa23.91■■□□□ 1.42
SLC47A1-211ENST00000575377 SOGA1O94964 1423 aa23.89■■□□□ 1.42
SLC47A1-211ENST00000575377 FGD5Q6ZNL6 1462 aa23.89■■□□□ 1.42
SLC47A1-211ENST00000575377 AQRO60306 1485 aaKnown RBP eCLIP23.89■■□□□ 1.41
SLC47A1-211ENST00000575377 TDRD9Q8NDG6 1382 aaKnown RBP23.8■■□□□ 1.4
SLC47A1-211ENST00000575377 CHD1O14646 1710 aa23.72■■□□□ 1.39
SLC47A1-211ENST00000575377 WDR97A6NE52 1622 aa23.71■■□□□ 1.39
SLC47A1-211ENST00000575377 FBLN2P98095 1184 aa23.7■■□□□ 1.38
SLC47A1-211ENST00000575377 WRNQ14191 1432 aaPredicted RBP eCLIP23.69■■□□□ 1.38
SLC47A1-211ENST00000575377 BIVM-ERCC5R4GMW8 1640 aa23.66■■□□□ 1.38
SLC47A1-211ENST00000575377 TOP2BQ02880 1626 aa23.65■■□□□ 1.38
SLC47A1-211ENST00000575377 SYNJ1O43426 1573 aa23.65■■□□□ 1.38
SLC47A1-211ENST00000575377 TRIM41Q8WV44 630 aa23.65■■□□□ 1.38
SLC47A1-211ENST00000575377 SNAPC4Q5SXM2 1469 aa23.64■■□□□ 1.37
SLC47A1-211ENST00000575377 ABCA10Q8WWZ4 1543 aa23.62■■□□□ 1.37
SLC47A1-211ENST00000575377 GRIN2BQ13224 1484 aa23.62■■□□□ 1.37
SLC47A1-211ENST00000575377 GAPVD1Q14C86 1478 aa23.61■■□□□ 1.37
SLC47A1-211ENST00000575377 PBRM1Q86U86 1689 aa23.6■■□□□ 1.37
SLC47A1-211ENST00000575377 MAGI1Q96QZ7 1491 aaPredicted RBP23.57■■□□□ 1.36
SLC47A1-211ENST00000575377 CHMP7Q8WUX9 453 aaPredicted RBP23.56■■□□□ 1.36
SLC47A1-211ENST00000575377 ABCA5Q8WWZ7 1642 aa23.55■■□□□ 1.36
SLC47A1-211ENST00000575377 RIMBP3CA6NJZ7 1639 aa23.54■■□□□ 1.36
SLC47A1-211ENST00000575377 RIMBP3BA6NNM3 1639 aa23.54■■□□□ 1.36
SLC47A1-211ENST00000575377 RIMBP3Q9UFD9 1639 aa23.54■■□□□ 1.36
SLC47A1-211ENST00000575377 SYNJ2O15056 1496 aa23.49■■□□□ 1.35
SLC47A1-211ENST00000575377 ARHGEF11O15085 1522 aa23.47■■□□□ 1.35
SLC47A1-211ENST00000575377 CLASP1Q7Z460 1538 aa23.38■■□□□ 1.33
SLC47A1-211ENST00000575377 ADAMTS12P58397 1594 aa23.35■■□□□ 1.33
SLC47A1-211ENST00000575377 CYB5RLQ6IPT4 315 aa23.34■■□□□ 1.33
SLC47A1-211ENST00000575377 ERICH3Q5RHP9 1530 aa23.34■■□□□ 1.33
SLC47A1-211ENST00000575377 GRIN2AQ12879 1464 aa23.31■■□□□ 1.32
SLC47A1-211ENST00000575377 FHAD1B1AJZ9 1412 aa23.31■■□□□ 1.32
SLC47A1-211ENST00000575377 ARAP1Q96P48 1450 aa23.27■■□□□ 1.32
SLC47A1-211ENST00000575377 CEP170Q5SW79 1584 aa23.23■■□□□ 1.31
SLC47A1-211ENST00000575377 NUP160Q12769 1436 aa23.21■■□□□ 1.31
SLC47A1-211ENST00000575377 KIF27Q86VH2 1401 aa23.21■■□□□ 1.31
SLC47A1-211ENST00000575377 IGF1RP08069 1367 aa23.15■■□□□ 1.3
SLC47A1-211ENST00000575377 CUL7Q14999 1698 aa23.09■■□□□ 1.29
SLC47A1-211ENST00000575377 ERCC6L2Q5T890 1561 aa23.08■■□□□ 1.29
SLC47A1-211ENST00000575377 SHROOM2Q13796 1616 aa23.07■■□□□ 1.28
SLC47A1-211ENST00000575377 JPH4Q96JJ6 628 aa23.03■■□□□ 1.28
SLC47A1-211ENST00000575377 CARMIL1Q5VZK9 1371 aa23.03■■□□□ 1.28
Retrieved 100 of 20,778 RNA–protein pairs in 161.5 ms