RNA–Protein interactions for RNA: ENST00000372499.5

LRMDA-201, Transcript of leucine rich melanocyte differentiation associated, humanhuman

APPRIS P3 TSL 1 (best) BASIC

Gene LRMDA, Length 899 nt, Biotype protein coding, Subcellular localisation Cytoplasm, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
LRMDA-201ENST00000372499 NISCHQ9Y2I1 1504 aa22.88■■□□□ 1.25
LRMDA-201ENST00000372499 CCDC180Q9P1Z9 1646 aa20.45■□□□□ 0.87
LRMDA-201ENST00000372499 ABCC9O60706 1549 aa20.3■□□□□ 0.84
LRMDA-201ENST00000372499 RB1CC1Q8TDY2 1594 aa19.39■□□□□ 0.69
LRMDA-201ENST00000372499 NACADO15069 1562 aa19.32■□□□□ 0.68
LRMDA-201ENST00000372499 DCAF8L2P0C7V8 631 aa19.15■□□□□ 0.66
LRMDA-201ENST00000372499 MYO15BQ96JP2 1530 aa19.15■□□□□ 0.66
LRMDA-201ENST00000372499 DNAJC5BQ9UF47 199 aa19.06■□□□□ 0.64
LRMDA-201ENST00000372499 ZCCHC6Q5VYS8 1495 aaKnown RBP19.01■□□□□ 0.63
LRMDA-201ENST00000372499 UNC13AQ9UPW8 1703 aa18.97■□□□□ 0.63
LRMDA-201ENST00000372499 DCAF1Q9Y4B6 1507 aa18.94■□□□□ 0.62
LRMDA-201ENST00000372499 PABPN1Q86U42 306 aaKnown RBP eCLIP18.92■□□□□ 0.62
LRMDA-201ENST00000372499 BICRAQ9NZM4 1560 aa18.87■□□□□ 0.61
LRMDA-201ENST00000372499 SHROOM4Q9ULL8 1493 aa18.62■□□□□ 0.57
LRMDA-201ENST00000372499 SCRIBQ14160 1630 aa18.62■□□□□ 0.57
LRMDA-201ENST00000372499 EIF4G1Q04637 1599 aaKnown RBP18.37■□□□□ 0.53
LRMDA-201ENST00000372499 CC2D2AQ9P2K1 1620 aa18.36■□□□□ 0.53
LRMDA-201ENST00000372499 CECR2Q9BXF3 1484 aa18.28■□□□□ 0.52
LRMDA-201ENST00000372499 AEBP2Q6ZN18 517 aaPredicted RBP17.89■□□□□ 0.45
LRMDA-201ENST00000372499 NCAPD3P42695 1498 aa17.86■□□□□ 0.45
LRMDA-201ENST00000372499 CHIC1Q5VXU3 224 aa17.84■□□□□ 0.45
LRMDA-201ENST00000372499 ATAD2BQ9ULI0 1458 aa17.82■□□□□ 0.44
LRMDA-201ENST00000372499 SMARCA4P51532 1647 aa17.8■□□□□ 0.44
LRMDA-201ENST00000372499 SMARCA2P51531 1590 aa17.74■□□□□ 0.43
LRMDA-201ENST00000372499 BAZ1AQ9NRL2 1556 aaPredicted RBP17.74■□□□□ 0.43
LRMDA-201ENST00000372499 HMGXB3Q12766 1538 aa17.72■□□□□ 0.43
LRMDA-201ENST00000372499 PEG3Q9GZU2 1588 aa17.67■□□□□ 0.42
LRMDA-201ENST00000372499 DNAJC5Q9H3Z4 198 aa17.65■□□□□ 0.42
LRMDA-201ENST00000372499 MROH2BQ7Z745 1585 aa17.64■□□□□ 0.41
LRMDA-201ENST00000372499 CUX2O14529 1486 aa17.62■□□□□ 0.41
LRMDA-201ENST00000372499 BAZ1BQ9UIG0 1483 aaKnown RBP17.61■□□□□ 0.41
LRMDA-201ENST00000372499 NESP48681 1621 aa17.5■□□□□ 0.39
LRMDA-201ENST00000372499 ERCC6Q03468 1493 aa17.49■□□□□ 0.39
LRMDA-201ENST00000372499 WIZO95785 1651 aa17.41■□□□□ 0.38
LRMDA-201ENST00000372499 LAMC3Q9Y6N6 1575 aa17.4■□□□□ 0.38
LRMDA-201ENST00000372499 THOC2Q8NI27 1593 aaKnown RBP17.36■□□□□ 0.37
LRMDA-201ENST00000372499 RSF1Q96T23 1441 aaPredicted RBP17.33■□□□□ 0.36
LRMDA-201ENST00000372499 CADPSQ9ULU8 1353 aa17.3■□□□□ 0.36
LRMDA-201ENST00000372499 PDS5BQ9NTI5 1447 aa17.28■□□□□ 0.36
LRMDA-201ENST00000372499 KIF21AQ7Z4S6 1674 aa17.26■□□□□ 0.35
LRMDA-201ENST00000372499 TOP2AP11388 1531 aaKnown RBP17.21■□□□□ 0.34
LRMDA-201ENST00000372499 CFTRP13569 1480 aa17.15■□□□□ 0.34
LRMDA-201ENST00000372499 MRC2Q9UBG0 1479 aa17.13■□□□□ 0.33
LRMDA-201ENST00000372499 WDR62O43379 1518 aa17.11■□□□□ 0.33
LRMDA-201ENST00000372499 FANCD2Q9BXW9 1451 aa17.09■□□□□ 0.33
LRMDA-201ENST00000372499 CEP164Q9UPV0 1460 aa17.08■□□□□ 0.32
LRMDA-201ENST00000372499 CCDC88BA6NC98 1476 aa17.02■□□□□ 0.32
LRMDA-201ENST00000372499 URB2Q14146 1524 aaKnown RBP16.96■□□□□ 0.3
LRMDA-201ENST00000372499 PRDM2Q13029 1718 aa16.94■□□□□ 0.3
LRMDA-201ENST00000372499 TOPBP1Q92547 1522 aa16.79■□□□□ 0.28
LRMDA-201ENST00000372499 ABCC8Q09428 1581 aa16.75■□□□□ 0.27
LRMDA-201ENST00000372499 IFT140Q96RY7 1462 aa16.74■□□□□ 0.27
LRMDA-201ENST00000372499 DNMBPQ6XZF7 1577 aa16.73■□□□□ 0.27
LRMDA-201ENST00000372499 ZNF608Q9ULD9 1512 aaPredicted RBP16.72■□□□□ 0.27
LRMDA-201ENST00000372499 OSCARQ8IYS5 282 aa16.66■□□□□ 0.26
LRMDA-201ENST00000372499 TRIM41Q8WV44 630 aa16.66■□□□□ 0.26
LRMDA-201ENST00000372499 TARBP1Q13395 1621 aaKnown RBP16.64■□□□□ 0.25
LRMDA-201ENST00000372499 POLA1P09884 1462 aaPredicted RBP16.63■□□□□ 0.25
LRMDA-201ENST00000372499 EIF4G3O43432 1585 aaKnown RBP16.61■□□□□ 0.25
LRMDA-201ENST00000372499 SUPT5HO00267 1087 aaKnown RBP16.58■□□□□ 0.24
LRMDA-201ENST00000372499 AQRO60306 1485 aaKnown RBP eCLIP16.58■□□□□ 0.24
LRMDA-201ENST00000372499 CUX1P39880 1505 aa16.56■□□□□ 0.24
LRMDA-201ENST00000372499 RAD54L2Q9Y4B4 1467 aa16.55■□□□□ 0.24
LRMDA-201ENST00000372499 RIMBP3CA6NJZ7 1639 aa16.55■□□□□ 0.24
LRMDA-201ENST00000372499 RIMBP3BA6NNM3 1639 aa16.55■□□□□ 0.24
LRMDA-201ENST00000372499 RIMBP3Q9UFD9 1639 aa16.55■□□□□ 0.24
LRMDA-201ENST00000372499 FGD5Q6ZNL6 1462 aa16.54■□□□□ 0.24
LRMDA-201ENST00000372499 SOGA1O94964 1423 aa16.53■□□□□ 0.24
LRMDA-201ENST00000372499 ARHGEF11O15085 1522 aa16.49■□□□□ 0.23
LRMDA-201ENST00000372499 TDRD9Q8NDG6 1382 aaKnown RBP16.49■□□□□ 0.23
LRMDA-201ENST00000372499 WDR97A6NE52 1622 aa16.47■□□□□ 0.23
LRMDA-201ENST00000372499 CHD1O14646 1710 aa16.45■□□□□ 0.22
LRMDA-201ENST00000372499 SNAPC4Q5SXM2 1469 aa16.41■□□□□ 0.22
LRMDA-201ENST00000372499 GRIN2BQ13224 1484 aa16.38■□□□□ 0.21
LRMDA-201ENST00000372499 MAGI1Q96QZ7 1491 aaPredicted RBP16.38■□□□□ 0.21
LRMDA-201ENST00000372499 ABCA10Q8WWZ4 1543 aa16.38■□□□□ 0.21
LRMDA-201ENST00000372499 FBLN2P98095 1184 aa16.37■□□□□ 0.21
LRMDA-201ENST00000372499 GAPVD1Q14C86 1478 aa16.34■□□□□ 0.21
LRMDA-201ENST00000372499 ABCA5Q8WWZ7 1642 aa16.34■□□□□ 0.21
LRMDA-201ENST00000372499 SYNJ2O15056 1496 aa16.32■□□□□ 0.2
LRMDA-201ENST00000372499 TOP2BQ02880 1626 aa16.32■□□□□ 0.2
LRMDA-201ENST00000372499 ARAP1Q96P48 1450 aa16.32■□□□□ 0.2
LRMDA-201ENST00000372499 BIVM-ERCC5R4GMW8 1640 aa16.32■□□□□ 0.2
LRMDA-201ENST00000372499 CLASP1Q7Z460 1538 aa16.31■□□□□ 0.2
LRMDA-201ENST00000372499 WRNQ14191 1432 aaPredicted RBP eCLIP16.31■□□□□ 0.2
LRMDA-201ENST00000372499 PBRM1Q86U86 1689 aa16.3■□□□□ 0.2
LRMDA-201ENST00000372499 SYNJ1O43426 1573 aa16.3■□□□□ 0.2
LRMDA-201ENST00000372499 CHMP7Q8WUX9 453 aaPredicted RBP16.3■□□□□ 0.2
LRMDA-201ENST00000372499 CYB5RLQ6IPT4 315 aa16.25■□□□□ 0.19
LRMDA-201ENST00000372499 ADAMTS12P58397 1594 aa16.18■□□□□ 0.18
LRMDA-201ENST00000372499 GRIN2AQ12879 1464 aa16.18■□□□□ 0.18
LRMDA-201ENST00000372499 ERICH3Q5RHP9 1530 aa16.16■□□□□ 0.18
LRMDA-201ENST00000372499 NUP160Q12769 1436 aa16.15■□□□□ 0.18
LRMDA-201ENST00000372499 FHAD1B1AJZ9 1412 aa16.14■□□□□ 0.17
LRMDA-201ENST00000372499 CEP170Q5SW79 1584 aa16.12■□□□□ 0.17
LRMDA-201ENST00000372499 ERCC6L2Q5T890 1561 aa16.06■□□□□ 0.16
LRMDA-201ENST00000372499 SHROOM2Q13796 1616 aa16.05■□□□□ 0.16
LRMDA-201ENST00000372499 IGF1RP08069 1367 aa16■□□□□ 0.15
LRMDA-201ENST00000372499 KIF27Q86VH2 1401 aa15.99■□□□□ 0.15
LRMDA-201ENST00000372499 TRHP20396 242 aaPredicted RBP15.98■□□□□ 0.15
Retrieved 100 of 20,778 RNA–protein pairs in 17.1 ms