RNA–Protein interactions for RNA: ENST00000417578.5

SNHG17-203, Transcript of small nucleolar RNA host gene 17, humanhuman

TSL 2 BASIC

Gene SNHG17, Length 880 nt, Biotype lincRNA, Subcellular localisation Cytoplasm, Cytosol, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SNHG17-203ENST00000417578 NISCHQ9Y2I1 1504 aa39.2■■■■□ 3.87
SNHG17-203ENST00000417578 CCDC180Q9P1Z9 1646 aa34.88■■■■□ 3.17
SNHG17-203ENST00000417578 ABCC9O60706 1549 aa34.12■■■■□ 3.05
SNHG17-203ENST00000417578 RB1CC1Q8TDY2 1594 aa32.86■■■□□ 2.85
SNHG17-203ENST00000417578 DCAF8L2P0C7V8 631 aa32.82■■■□□ 2.84
SNHG17-203ENST00000417578 NACADO15069 1562 aa32.82■■■□□ 2.84
SNHG17-203ENST00000417578 ZCCHC6Q5VYS8 1495 aaKnown RBP32.63■■■□□ 2.81
SNHG17-203ENST00000417578 MYO15BQ96JP2 1530 aa32.61■■■□□ 2.81
SNHG17-203ENST00000417578 DCAF1Q9Y4B6 1507 aa32.46■■■□□ 2.79
SNHG17-203ENST00000417578 UNC13AQ9UPW8 1703 aa32.09■■■□□ 2.73
SNHG17-203ENST00000417578 PABPN1Q86U42 306 aaKnown RBP eCLIP31.9■■■□□ 2.7
SNHG17-203ENST00000417578 BICRAQ9NZM4 1560 aa31.81■■■□□ 2.68
SNHG17-203ENST00000417578 SCRIBQ14160 1630 aa31.78■■■□□ 2.68
SNHG17-203ENST00000417578 SHROOM4Q9ULL8 1493 aa31.53■■■□□ 2.64
SNHG17-203ENST00000417578 DNAJC5BQ9UF47 199 aa31.33■■■□□ 2.61
SNHG17-203ENST00000417578 EIF4G1Q04637 1599 aaKnown RBP31■■■□□ 2.55
SNHG17-203ENST00000417578 CC2D2AQ9P2K1 1620 aa30.88■■■□□ 2.53
SNHG17-203ENST00000417578 CECR2Q9BXF3 1484 aa30.68■■■□□ 2.5
SNHG17-203ENST00000417578 SMARCA4P51532 1647 aa30.43■■■□□ 2.46
SNHG17-203ENST00000417578 BAZ1AQ9NRL2 1556 aaPredicted RBP30.41■■■□□ 2.46
SNHG17-203ENST00000417578 NCAPD3P42695 1498 aa30.27■■■□□ 2.44
SNHG17-203ENST00000417578 ATAD2BQ9ULI0 1458 aa30.26■■■□□ 2.44
SNHG17-203ENST00000417578 SMARCA2P51531 1590 aa30.25■■■□□ 2.43
SNHG17-203ENST00000417578 MROH2BQ7Z745 1585 aa30.19■■■□□ 2.42
SNHG17-203ENST00000417578 PEG3Q9GZU2 1588 aa30.13■■■□□ 2.41
SNHG17-203ENST00000417578 HMGXB3Q12766 1538 aa30.11■■■□□ 2.41
SNHG17-203ENST00000417578 BAZ1BQ9UIG0 1483 aaKnown RBP30.03■■■□□ 2.4
SNHG17-203ENST00000417578 WIZO95785 1651 aa29.88■■■□□ 2.37
SNHG17-203ENST00000417578 RSF1Q96T23 1441 aaPredicted RBP29.85■■■□□ 2.37
SNHG17-203ENST00000417578 TOP2AP11388 1531 aaKnown RBP29.56■■■□□ 2.32
SNHG17-203ENST00000417578 NESP48681 1621 aa29.5■■■□□ 2.31
SNHG17-203ENST00000417578 LAMC3Q9Y6N6 1575 aa29.49■■■□□ 2.31
SNHG17-203ENST00000417578 ERCC6Q03468 1493 aa29.45■■■□□ 2.31
SNHG17-203ENST00000417578 CADPSQ9ULU8 1353 aa29.39■■■□□ 2.3
SNHG17-203ENST00000417578 PDS5BQ9NTI5 1447 aa29.31■■■□□ 2.28
SNHG17-203ENST00000417578 CCDC88BA6NC98 1476 aa29.22■■■□□ 2.27
SNHG17-203ENST00000417578 CFTRP13569 1480 aa29.2■■■□□ 2.26
SNHG17-203ENST00000417578 KIF21AQ7Z4S6 1674 aa29.18■■■□□ 2.26
SNHG17-203ENST00000417578 CUX2O14529 1486 aa29.15■■■□□ 2.26
SNHG17-203ENST00000417578 SUPT5HO00267 1087 aaKnown RBP29.11■■■□□ 2.25
SNHG17-203ENST00000417578 THOC2Q8NI27 1593 aaKnown RBP29.07■■■□□ 2.24
SNHG17-203ENST00000417578 FANCD2Q9BXW9 1451 aa29.04■■■□□ 2.24
SNHG17-203ENST00000417578 CEP164Q9UPV0 1460 aa29.01■■■□□ 2.23
SNHG17-203ENST00000417578 PRDM2Q13029 1718 aa29■■■□□ 2.23
SNHG17-203ENST00000417578 MRC2Q9UBG0 1479 aa28.97■■■□□ 2.23
SNHG17-203ENST00000417578 WDR62O43379 1518 aa28.86■■■□□ 2.21
SNHG17-203ENST00000417578 URB2Q14146 1524 aaKnown RBP28.72■■■□□ 2.19
SNHG17-203ENST00000417578 ABCC8Q09428 1581 aa28.63■■■□□ 2.17
SNHG17-203ENST00000417578 TOPBP1Q92547 1522 aa28.56■■■□□ 2.16
SNHG17-203ENST00000417578 DNMBPQ6XZF7 1577 aa28.54■■■□□ 2.16
SNHG17-203ENST00000417578 IFT140Q96RY7 1462 aa28.42■■■□□ 2.14
SNHG17-203ENST00000417578 CUX1P39880 1505 aa28.32■■■□□ 2.12
SNHG17-203ENST00000417578 POLA1P09884 1462 aaPredicted RBP28.31■■■□□ 2.12
SNHG17-203ENST00000417578 DNAJC5Q9H3Z4 198 aa28.3■■■□□ 2.12
SNHG17-203ENST00000417578 FGD5Q6ZNL6 1462 aa28.25■■■□□ 2.11
SNHG17-203ENST00000417578 TARBP1Q13395 1621 aaKnown RBP28.25■■■□□ 2.11
SNHG17-203ENST00000417578 ZNF608Q9ULD9 1512 aaPredicted RBP28.24■■■□□ 2.11
SNHG17-203ENST00000417578 SOGA1O94964 1423 aa28.24■■■□□ 2.11
SNHG17-203ENST00000417578 RAD54L2Q9Y4B4 1467 aa28.19■■■□□ 2.1
SNHG17-203ENST00000417578 WRNQ14191 1432 aaPredicted RBP eCLIP28.17■■■□□ 2.1
SNHG17-203ENST00000417578 EIF4G3O43432 1585 aaKnown RBP28.14■■■□□ 2.1
SNHG17-203ENST00000417578 TOP2BQ02880 1626 aa28.1■■■□□ 2.09
SNHG17-203ENST00000417578 AQRO60306 1485 aaKnown RBP eCLIP28.1■■■□□ 2.095e-7■■■■■ 27.6
SNHG17-203ENST00000417578 BIVM-ERCC5R4GMW8 1640 aa28.1■■■□□ 2.09
SNHG17-203ENST00000417578 WDR97A6NE52 1622 aa28.08■■■□□ 2.09
SNHG17-203ENST00000417578 SYNJ1O43426 1573 aa28.06■■■□□ 2.08
SNHG17-203ENST00000417578 TDRD9Q8NDG6 1382 aaKnown RBP28.05■■■□□ 2.08
SNHG17-203ENST00000417578 OSCARQ8IYS5 282 aa27.99■■■□□ 2.07
SNHG17-203ENST00000417578 ABCA10Q8WWZ4 1543 aa27.98■■■□□ 2.07
SNHG17-203ENST00000417578 GRIN2BQ13224 1484 aa27.9■■■□□ 2.06
SNHG17-203ENST00000417578 GAPVD1Q14C86 1478 aa27.9■■■□□ 2.06
SNHG17-203ENST00000417578 ABCA5Q8WWZ7 1642 aa27.85■■■□□ 2.05
SNHG17-203ENST00000417578 PBRM1Q86U86 1689 aa27.84■■■□□ 2.05
SNHG17-203ENST00000417578 SNAPC4Q5SXM2 1469 aa27.83■■■□□ 2.05
SNHG17-203ENST00000417578 MAGI1Q96QZ7 1491 aaPredicted RBP27.83■■■□□ 2.05
SNHG17-203ENST00000417578 FBLN2P98095 1184 aa27.82■■■□□ 2.04
SNHG17-203ENST00000417578 CHD1O14646 1710 aa27.81■■■□□ 2.04
SNHG17-203ENST00000417578 CHMP7Q8WUX9 453 aaPredicted RBP27.76■■■□□ 2.03
SNHG17-203ENST00000417578 SYNJ2O15056 1496 aa27.72■■■□□ 2.03
SNHG17-203ENST00000417578 ERICH3Q5RHP9 1530 aa27.67■■■□□ 2.02
SNHG17-203ENST00000417578 KIF27Q86VH2 1401 aa27.6■■■□□ 2.01
SNHG17-203ENST00000417578 ADAMTS12P58397 1594 aa27.59■■■□□ 2.01
SNHG17-203ENST00000417578 FHAD1B1AJZ9 1412 aa27.58■■■□□ 2.01
SNHG17-203ENST00000417578 TRIM41Q8WV44 630 aa27.54■■■□□ 2
SNHG17-203ENST00000417578 GRIN2AQ12879 1464 aa27.52■■■□□ 2
SNHG17-203ENST00000417578 CLASP1Q7Z460 1538 aa27.49■■□□□ 1.99
SNHG17-203ENST00000417578 IGF1RP08069 1367 aa27.48■■□□□ 1.99
SNHG17-203ENST00000417578 RIMBP3CA6NJZ7 1639 aa27.47■■□□□ 1.99
SNHG17-203ENST00000417578 RIMBP3BA6NNM3 1639 aa27.47■■□□□ 1.99
SNHG17-203ENST00000417578 RIMBP3Q9UFD9 1639 aa27.47■■□□□ 1.99
SNHG17-203ENST00000417578 ARHGEF11O15085 1522 aa27.46■■□□□ 1.99
SNHG17-203ENST00000417578 CUL7Q14999 1698 aa27.42■■□□□ 1.98
SNHG17-203ENST00000417578 NUP160Q12769 1436 aa27.4■■□□□ 1.98
SNHG17-203ENST00000417578 CEP170Q5SW79 1584 aa27.36■■□□□ 1.97
SNHG17-203ENST00000417578 CARMIL1Q5VZK9 1371 aa27.33■■□□□ 1.97
SNHG17-203ENST00000417578 RUSC2Q8N2Y8 1516 aa27.28■■□□□ 1.96
SNHG17-203ENST00000417578 CYB5RLQ6IPT4 315 aa27.25■■□□□ 1.95
SNHG17-203ENST00000417578 ARAP1Q96P48 1450 aa27.21■■□□□ 1.95
SNHG17-203ENST00000417578 SHROOM2Q13796 1616 aa27.19■■□□□ 1.94
SNHG17-203ENST00000417578 JPH4Q96JJ6 628 aa27.17■■□□□ 1.94
Retrieved 100 of 20,778 RNA–protein pairs in 103.5 ms