RNA–Protein interactions for RNA: ENST00000571335.5

SLC47A1-206, Transcript of solute carrier family 47 member 1, humanhuman

TSL 1 (best) BASIC

Gene SLC47A1, Length 1,415 nt, Biotype protein coding, Subcellular localisation Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SLC47A1-206ENST00000571335 NISCHQ9Y2I1 1504 aa32.94■■■□□ 2.86
SLC47A1-206ENST00000571335 CCDC180Q9P1Z9 1646 aa29.01■■■□□ 2.23
SLC47A1-206ENST00000571335 ABCC9O60706 1549 aa27.77■■■□□ 2.04
SLC47A1-206ENST00000571335 ZCCHC6Q5VYS8 1495 aaKnown RBP27.57■■■□□ 2
SLC47A1-206ENST00000571335 DCAF1Q9Y4B6 1507 aa27.28■■□□□ 1.96
SLC47A1-206ENST00000571335 DCAF8L2P0C7V8 631 aa27.24■■□□□ 1.95
SLC47A1-206ENST00000571335 MYO15BQ96JP2 1530 aa27.16■■□□□ 1.94
SLC47A1-206ENST00000571335 NACADO15069 1562 aa27.11■■□□□ 1.93
SLC47A1-206ENST00000571335 RB1CC1Q8TDY2 1594 aa26.99■■□□□ 1.91
SLC47A1-206ENST00000571335 SCRIBQ14160 1630 aa26.52■■□□□ 1.84
SLC47A1-206ENST00000571335 UNC13AQ9UPW8 1703 aa26.43■■□□□ 1.82
SLC47A1-206ENST00000571335 SHROOM4Q9ULL8 1493 aa26.4■■□□□ 1.82
SLC47A1-206ENST00000571335 BICRAQ9NZM4 1560 aa26.18■■□□□ 1.78
SLC47A1-206ENST00000571335 PABPN1Q86U42 306 aaKnown RBP eCLIP26.05■■□□□ 1.76
SLC47A1-206ENST00000571335 CECR2Q9BXF3 1484 aa25.6■■□□□ 1.69
SLC47A1-206ENST00000571335 BAZ1AQ9NRL2 1556 aaPredicted RBP25.48■■□□□ 1.67
SLC47A1-206ENST00000571335 SMARCA4P51532 1647 aa25.43■■□□□ 1.66
SLC47A1-206ENST00000571335 EIF4G1Q04637 1599 aaKnown RBP25.42■■□□□ 1.66
SLC47A1-206ENST00000571335 MROH2BQ7Z745 1585 aa25.4■■□□□ 1.66
SLC47A1-206ENST00000571335 RSF1Q96T23 1441 aaPredicted RBP25.34■■□□□ 1.65
SLC47A1-206ENST00000571335 WIZO95785 1651 aa25.18■■□□□ 1.62
SLC47A1-206ENST00000571335 PEG3Q9GZU2 1588 aa25.18■■□□□ 1.62
SLC47A1-206ENST00000571335 CC2D2AQ9P2K1 1620 aa25.16■■□□□ 1.62
SLC47A1-206ENST00000571335 SUPT5HO00267 1087 aaKnown RBP25.15■■□□□ 1.62
SLC47A1-206ENST00000571335 ATAD2BQ9ULI0 1458 aa25.12■■□□□ 1.61
SLC47A1-206ENST00000571335 SMARCA2P51531 1590 aa25.11■■□□□ 1.61
SLC47A1-206ENST00000571335 NCAPD3P42695 1498 aa25.01■■□□□ 1.59
SLC47A1-206ENST00000571335 HMGXB3Q12766 1538 aa24.95■■□□□ 1.58
SLC47A1-206ENST00000571335 BAZ1BQ9UIG0 1483 aaKnown RBP24.94■■□□□ 1.58
SLC47A1-206ENST00000571335 DNAJC5BQ9UF47 199 aa24.94■■□□□ 1.58
SLC47A1-206ENST00000571335 TOP2AP11388 1531 aaKnown RBP24.92■■□□□ 1.58
SLC47A1-206ENST00000571335 CCDC88BA6NC98 1476 aa24.63■■□□□ 1.53
SLC47A1-206ENST00000571335 CADPSQ9ULU8 1353 aa24.32■■□□□ 1.48
SLC47A1-206ENST00000571335 CFTRP13569 1480 aa24.31■■□□□ 1.48
SLC47A1-206ENST00000571335 LAMC3Q9Y6N6 1575 aa24.26■■□□□ 1.47
SLC47A1-206ENST00000571335 NESP48681 1621 aa24.23■■□□□ 1.47
SLC47A1-206ENST00000571335 PRDM2Q13029 1718 aa24.2■■□□□ 1.47
SLC47A1-206ENST00000571335 PDS5BQ9NTI5 1447 aa24.06■■□□□ 1.44
SLC47A1-206ENST00000571335 FANCD2Q9BXW9 1451 aa24.04■■□□□ 1.44
SLC47A1-206ENST00000571335 KIF21AQ7Z4S6 1674 aa23.97■■□□□ 1.43
SLC47A1-206ENST00000571335 CEP164Q9UPV0 1460 aa23.94■■□□□ 1.42
SLC47A1-206ENST00000571335 ABCC8Q09428 1581 aa23.93■■□□□ 1.42
SLC47A1-206ENST00000571335 CHIC1Q5VXU3 224 aa23.87■■□□□ 1.41
SLC47A1-206ENST00000571335 ERCC6Q03468 1493 aa23.87■■□□□ 1.41
SLC47A1-206ENST00000571335 WRNQ14191 1432 aaPredicted RBP eCLIP23.86■■□□□ 1.41
SLC47A1-206ENST00000571335 CUX1P39880 1505 aa23.79■■□□□ 1.4
SLC47A1-206ENST00000571335 SYNJ1O43426 1573 aa23.79■■□□□ 1.4
SLC47A1-206ENST00000571335 MRC2Q9UBG0 1479 aa23.77■■□□□ 1.4
SLC47A1-206ENST00000571335 URB2Q14146 1524 aaKnown RBP23.77■■□□□ 1.4
SLC47A1-206ENST00000571335 DNMBPQ6XZF7 1577 aa23.76■■□□□ 1.39
SLC47A1-206ENST00000571335 TOP2BQ02880 1626 aa23.76■■□□□ 1.39
SLC47A1-206ENST00000571335 BIVM-ERCC5R4GMW8 1640 aa23.76■■□□□ 1.39
SLC47A1-206ENST00000571335 THOC2Q8NI27 1593 aaKnown RBP23.74■■□□□ 1.39
SLC47A1-206ENST00000571335 TRIM41Q8WV44 630 aa23.73■■□□□ 1.39
SLC47A1-206ENST00000571335 TOPBP1Q92547 1522 aa23.73■■□□□ 1.39
SLC47A1-206ENST00000571335 WDR62O43379 1518 aa23.68■■□□□ 1.38
SLC47A1-206ENST00000571335 FGD5Q6ZNL6 1462 aa23.6■■□□□ 1.37
SLC47A1-206ENST00000571335 POLA1P09884 1462 aaPredicted RBP23.57■■□□□ 1.36
SLC47A1-206ENST00000571335 CUX2O14529 1486 aa23.48■■□□□ 1.35
SLC47A1-206ENST00000571335 SOGA1O94964 1423 aa23.48■■□□□ 1.35
SLC47A1-206ENST00000571335 RAD54L2Q9Y4B4 1467 aa23.47■■□□□ 1.35
SLC47A1-206ENST00000571335 TARBP1Q13395 1621 aaKnown RBP23.43■■□□□ 1.34
SLC47A1-206ENST00000571335 IFT140Q96RY7 1462 aa23.41■■□□□ 1.34
SLC47A1-206ENST00000571335 ABCA10Q8WWZ4 1543 aa23.41■■□□□ 1.34
SLC47A1-206ENST00000571335 WDR97A6NE52 1622 aa23.41■■□□□ 1.34
SLC47A1-206ENST00000571335 RUSC2Q8N2Y8 1516 aa23.32■■□□□ 1.32
SLC47A1-206ENST00000571335 KIF27Q86VH2 1401 aa23.3■■□□□ 1.32
SLC47A1-206ENST00000571335 EEA1Q15075 1411 aa23.28■■□□□ 1.32
SLC47A1-206ENST00000571335 TDRD9Q8NDG6 1382 aaKnown RBP23.27■■□□□ 1.32
SLC47A1-206ENST00000571335 ABCA5Q8WWZ7 1642 aa23.27■■□□□ 1.31
SLC47A1-206ENST00000571335 ZNF608Q9ULD9 1512 aaPredicted RBP23.26■■□□□ 1.31
SLC47A1-206ENST00000571335 FAM9AQ8IZU1 332 aaPredicted RBP23.23■■□□□ 1.31
SLC47A1-206ENST00000571335 GAPVD1Q14C86 1478 aa23.22■■□□□ 1.31
SLC47A1-206ENST00000571335 AQRO60306 1485 aaKnown RBP eCLIP23.21■■□□□ 1.311e-7■■■□□ 16.7
SLC47A1-206ENST00000571335 EIF4G3O43432 1585 aaKnown RBP23.21■■□□□ 1.31
SLC47A1-206ENST00000571335 CSRNP3Q8WYN3 585 aa23.16■■□□□ 1.3
SLC47A1-206ENST00000571335 PBRM1Q86U86 1689 aa23.16■■□□□ 1.3
SLC47A1-206ENST00000571335 IGF1RP08069 1367 aa23.15■■□□□ 1.3
SLC47A1-206ENST00000571335 ERICH3Q5RHP9 1530 aa23.14■■□□□ 1.29
SLC47A1-206ENST00000571335 GRIN2BQ13224 1484 aa23.13■■□□□ 1.29
SLC47A1-206ENST00000571335 CUL7Q14999 1698 aa23.05■■□□□ 1.28
SLC47A1-206ENST00000571335 PRXQ9BXM0 1461 aa23.04■■□□□ 1.28
SLC47A1-206ENST00000571335 CARMIL1Q5VZK9 1371 aa23.01■■□□□ 1.27
SLC47A1-206ENST00000571335 KIF21BO75037 1637 aa23.01■■□□□ 1.27
SLC47A1-206ENST00000571335 SNAPC4Q5SXM2 1469 aa23.01■■□□□ 1.27
SLC47A1-206ENST00000571335 ADAMTS12P58397 1594 aa23■■□□□ 1.27
SLC47A1-206ENST00000571335 MAGI1Q96QZ7 1491 aaPredicted RBP22.99■■□□□ 1.27
SLC47A1-206ENST00000571335 FHAD1B1AJZ9 1412 aa22.97■■□□□ 1.27
SLC47A1-206ENST00000571335 RAPGEF2Q9Y4G8 1499 aa22.96■■□□□ 1.27
SLC47A1-206ENST00000571335 GOLGA3Q08378 1498 aa22.92■■□□□ 1.26
SLC47A1-206ENST00000571335 SYNJ2O15056 1496 aa22.91■■□□□ 1.26
SLC47A1-206ENST00000571335 LOC105371045A0A1W2PR82 267 aa22.89■■□□□ 1.25
SLC47A1-206ENST00000571335 EHMT2Q96KQ7 1210 aa22.87■■□□□ 1.25
SLC47A1-206ENST00000571335 GRIN2AQ12879 1464 aa22.83■■□□□ 1.25
SLC47A1-206ENST00000571335 CHMP7Q8WUX9 453 aaPredicted RBP22.82■■□□□ 1.24
SLC47A1-206ENST00000571335 CHD1O14646 1710 aa22.81■■□□□ 1.24
SLC47A1-206ENST00000571335 FBLN2P98095 1184 aa22.79■■□□□ 1.24
SLC47A1-206ENST00000571335 UBTFP17480 764 aaKnown RBP22.78■■□□□ 1.24
SLC47A1-206ENST00000571335 TNIKQ9UKE5 1360 aa22.75■■□□□ 1.23
SLC47A1-206ENST00000571335 CTTNBP2Q8WZ74 1663 aa22.73■■□□□ 1.23
Retrieved 100 of 20,778 RNA–protein pairs in 12 ms