RNA–Protein interactions for RNA: ENST00000575023.5

SLC47A1-209, Transcript of solute carrier family 47 member 1, humanhuman

TSL 1 (best) BASIC

Gene SLC47A1, Length 2,224 nt, Biotype protein coding, Subcellular localisation Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SLC47A1-209ENST00000575023 NISCHQ9Y2I1 1504 aa36.57■■■■□ 3.45
SLC47A1-209ENST00000575023 CCDC180Q9P1Z9 1646 aa31.51■■■□□ 2.63
SLC47A1-209ENST00000575023 ZCCHC6Q5VYS8 1495 aaKnown RBP30.74■■■□□ 2.51
SLC47A1-209ENST00000575023 DCAF8L2P0C7V8 631 aa30.68■■■□□ 2.5
SLC47A1-209ENST00000575023 SHROOM4Q9ULL8 1493 aa30.56■■■□□ 2.48
SLC47A1-209ENST00000575023 ABCC9O60706 1549 aa30.02■■■□□ 2.4
SLC47A1-209ENST00000575023 DCAF1Q9Y4B6 1507 aa29.99■■■□□ 2.39
SLC47A1-209ENST00000575023 SUPT5HO00267 1087 aaKnown RBP29.69■■■□□ 2.34
SLC47A1-209ENST00000575023 MYO15BQ96JP2 1530 aa29.46■■■□□ 2.31
SLC47A1-209ENST00000575023 SCRIBQ14160 1630 aa29.41■■■□□ 2.3
SLC47A1-209ENST00000575023 NACADO15069 1562 aa29.36■■■□□ 2.29
SLC47A1-209ENST00000575023 RB1CC1Q8TDY2 1594 aa29.1■■■□□ 2.25
SLC47A1-209ENST00000575023 CHIC1Q5VXU3 224 aa29.06■■■□□ 2.24
SLC47A1-209ENST00000575023 UNC13AQ9UPW8 1703 aa28.61■■■□□ 2.17
SLC47A1-209ENST00000575023 CECR2Q9BXF3 1484 aa28.6■■■□□ 2.17
SLC47A1-209ENST00000575023 RSF1Q96T23 1441 aaPredicted RBP28.59■■■□□ 2.17
SLC47A1-209ENST00000575023 PABPN1Q86U42 306 aaKnown RBP eCLIP28.55■■■□□ 2.16
SLC47A1-209ENST00000575023 HRCP23327 699 aa28.41■■■□□ 2.14
SLC47A1-209ENST00000575023 MROH2BQ7Z745 1585 aa28.39■■■□□ 2.14
SLC47A1-209ENST00000575023 BICRAQ9NZM4 1560 aa28.3■■■□□ 2.12
SLC47A1-209ENST00000575023 PCGF6Q9BYE7 350 aa28.21■■■□□ 2.11
SLC47A1-209ENST00000575023 WIZO95785 1651 aa28.2■■■□□ 2.1
SLC47A1-209ENST00000575023 BAZ1AQ9NRL2 1556 aaPredicted RBP28.16■■■□□ 2.1
SLC47A1-209ENST00000575023 LOC105371045A0A1W2PR82 267 aa28.13■■■□□ 2.09
SLC47A1-209ENST00000575023 SMARCA4P51532 1647 aa28.04■■■□□ 2.08
SLC47A1-209ENST00000575023 TRIM26Q12899 539 aaPredicted RBP27.74■■■□□ 2.03
SLC47A1-209ENST00000575023 TOP2AP11388 1531 aaKnown RBP27.73■■■□□ 2.03
SLC47A1-209ENST00000575023 TRIM41Q8WV44 630 aa27.71■■■□□ 2.03
SLC47A1-209ENST00000575023 PPARGC1BQ86YN6 1023 aaKnown RBP27.68■■■□□ 2.02
SLC47A1-209ENST00000575023 CCDC88BA6NC98 1476 aa27.61■■■□□ 2.01
SLC47A1-209ENST00000575023 ATAD2BQ9ULI0 1458 aa27.56■■■□□ 2
SLC47A1-209ENST00000575023 SMARCA2P51531 1590 aa27.55■■■□□ 2
SLC47A1-209ENST00000575023 PEG3Q9GZU2 1588 aa27.52■■■□□ 2
SLC47A1-209ENST00000575023 EIF4G1Q04637 1599 aaKnown RBP27.44■■□□□ 1.98
SLC47A1-209ENST00000575023 BAZ1BQ9UIG0 1483 aaKnown RBP27.44■■□□□ 1.98
SLC47A1-209ENST00000575023 FAM9AQ8IZU1 332 aaPredicted RBP27.39■■□□□ 1.98
SLC47A1-209ENST00000575023 ABCC8Q09428 1581 aa27.24■■□□□ 1.95
SLC47A1-209ENST00000575023 ZEB1P37275 1124 aaPredicted RBP27.23■■□□□ 1.95
SLC47A1-209ENST00000575023 NCAPD3P42695 1498 aa27.17■■□□□ 1.94
SLC47A1-209ENST00000575023 EHMT2Q96KQ7 1210 aa27.17■■□□□ 1.94
SLC47A1-209ENST00000575023 HMGXB3Q12766 1538 aa27.07■■□□□ 1.92
SLC47A1-209ENST00000575023 CC2D2AQ9P2K1 1620 aa27.01■■□□□ 1.91
SLC47A1-209ENST00000575023 WRNQ14191 1432 aaPredicted RBP eCLIP26.9■■□□□ 1.9
SLC47A1-209ENST00000575023 SOGA1O94964 1423 aa26.81■■□□□ 1.88
SLC47A1-209ENST00000575023 SYNJ1O43426 1573 aa26.78■■□□□ 1.88
SLC47A1-209ENST00000575023 RUSC2Q8N2Y8 1516 aa26.73■■□□□ 1.87
SLC47A1-209ENST00000575023 CFTRP13569 1480 aa26.69■■□□□ 1.86
SLC47A1-209ENST00000575023 EEA1Q15075 1411 aa26.67■■□□□ 1.86
SLC47A1-209ENST00000575023 DNAJC5BQ9UF47 199 aa26.62■■□□□ 1.85
SLC47A1-209ENST00000575023 CADPSQ9ULU8 1353 aa26.61■■□□□ 1.85
SLC47A1-209ENST00000575023 CSRNP3Q8WYN3 585 aa26.6■■□□□ 1.85
SLC47A1-209ENST00000575023 TNIKQ9UKE5 1360 aa26.58■■□□□ 1.85
SLC47A1-209ENST00000575023 CEP162Q5TB80 1403 aa26.58■■□□□ 1.85
SLC47A1-209ENST00000575023 TOP2BQ02880 1626 aa26.52■■□□□ 1.84
SLC47A1-209ENST00000575023 HNRNPUL2-BSCL2H3BQZ7 746 aaPredicted RBP26.51■■□□□ 1.83
SLC47A1-209ENST00000575023 CUX1P39880 1505 aa26.49■■□□□ 1.83
SLC47A1-209ENST00000575023 CCER1Q8TC90 406 aaPredicted RBP26.46■■□□□ 1.83
SLC47A1-209ENST00000575023 NESP48681 1621 aa26.46■■□□□ 1.83
SLC47A1-209ENST00000575023 GOLGA3Q08378 1498 aa26.45■■□□□ 1.82
SLC47A1-209ENST00000575023 UBTFP17480 764 aaKnown RBP26.43■■□□□ 1.82
SLC47A1-209ENST00000575023 BIVM-ERCC5R4GMW8 1640 aa26.43■■□□□ 1.82
SLC47A1-209ENST00000575023 PRDM2Q13029 1718 aa26.4■■□□□ 1.82
SLC47A1-209ENST00000575023 KIF21BO75037 1637 aa26.35■■□□□ 1.81
SLC47A1-209ENST00000575023 FANCD2Q9BXW9 1451 aa26.34■■□□□ 1.81
SLC47A1-209ENST00000575023 CEP164Q9UPV0 1460 aa26.31■■□□□ 1.8
SLC47A1-209ENST00000575023 TTBK1Q5TCY1 1321 aaPredicted RBP26.24■■□□□ 1.79
SLC47A1-209ENST00000575023 SCAF1Q9H7N4 1312 aaKnown RBP26.21■■□□□ 1.79
SLC47A1-209ENST00000575023 RANGAP1P46060 587 aaPredicted RBP26.19■■□□□ 1.78
SLC47A1-209ENST00000575023 RAPGEF2Q9Y4G8 1499 aa26.19■■□□□ 1.78
SLC47A1-209ENST00000575023 FGD5Q6ZNL6 1462 aa26.17■■□□□ 1.78
SLC47A1-209ENST00000575023 LAMC3Q9Y6N6 1575 aa26.15■■□□□ 1.78
SLC47A1-209ENST00000575023 KIF27Q86VH2 1401 aa26.15■■□□□ 1.78
SLC47A1-209ENST00000575023 CUX2O14529 1486 aa26.11■■□□□ 1.77
SLC47A1-209ENST00000575023 CLIP1P30622 1438 aa26.09■■□□□ 1.77
SLC47A1-209ENST00000575023 TOPBP1Q92547 1522 aa26.07■■□□□ 1.76
SLC47A1-209ENST00000575023 DIEXFQ68CQ4 756 aaKnown RBP26.06■■□□□ 1.76
SLC47A1-209ENST00000575023 PDS5BQ9NTI5 1447 aa26.05■■□□□ 1.76
SLC47A1-209ENST00000575023 RAD54L2Q9Y4B4 1467 aa26.04■■□□□ 1.76
SLC47A1-209ENST00000575023 DNMBPQ6XZF7 1577 aa26.04■■□□□ 1.76
SLC47A1-209ENST00000575023 PRXQ9BXM0 1461 aa26.02■■□□□ 1.76
SLC47A1-209ENST00000575023 URB2Q14146 1524 aaKnown RBP26.01■■□□□ 1.75
SLC47A1-209ENST00000575023 VPS8Q8N3P4 1428 aa26■■□□□ 1.75
SLC47A1-209ENST00000575023 POLA1P09884 1462 aaPredicted RBP25.98■■□□□ 1.75
SLC47A1-209ENST00000575023 KIF21AQ7Z4S6 1674 aa25.97■■□□□ 1.75
SLC47A1-209ENST00000575023 IGF1RP08069 1367 aa25.96■■□□□ 1.75
SLC47A1-209ENST00000575023 ACIN1Q9UKV3 1341 aaKnown RBP25.96■■□□□ 1.75
SLC47A1-209ENST00000575023 ERICH3Q5RHP9 1530 aa25.94■■□□□ 1.74
SLC47A1-209ENST00000575023 PELP1Q8IZL8 1130 aaKnown RBP25.9■■□□□ 1.74
SLC47A1-209ENST00000575023 NEUROD1Q13562 356 aa25.88■■□□□ 1.73
SLC47A1-209ENST00000575023 ZNF316A6NFI3 1004 aaPredicted RBP25.87■■□□□ 1.73
SLC47A1-209ENST00000575023 CARMIL1Q5VZK9 1371 aa25.85■■□□□ 1.73
SLC47A1-209ENST00000575023 ABCA10Q8WWZ4 1543 aa25.83■■□□□ 1.73
SLC47A1-209ENST00000575023 HNRNPUL2Q1KMD3 747 aaKnown RBP25.82■■□□□ 1.72
SLC47A1-209ENST00000575023 TDRD9Q8NDG6 1382 aaKnown RBP25.81■■□□□ 1.72
SLC47A1-209ENST00000575023 APLP2Q06481 763 aa25.8■■□□□ 1.72
SLC47A1-209ENST00000575023 CENPBP07199 599 aaPredicted RBP25.78■■□□□ 1.72
SLC47A1-209ENST00000575023 ARAP1Q96P48 1450 aa25.72■■□□□ 1.71
SLC47A1-209ENST00000575023 MRC2Q9UBG0 1479 aa25.69■■□□□ 1.7
SLC47A1-209ENST00000575023 WDR97A6NE52 1622 aa25.65■■□□□ 1.7
SLC47A1-209ENST00000575023 ERCC6Q03468 1493 aa25.63■■□□□ 1.69
Retrieved 100 of 20,778 RNA–protein pairs in 12.9 ms