RNA–Protein interactions for RNA: ENST00000495425.6

SLC47A1-204, Transcript of solute carrier family 47 member 1, humanhuman

TSL 2

Gene SLC47A1, Length 1,066 nt, Biotype retained intron, Subcellular localisation Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SLC47A1-204ENST00000495425 NISCHQ9Y2I1 1504 aa34.69■■■■□ 3.14
SLC47A1-204ENST00000495425 ABCC9O60706 1549 aa31.76■■■□□ 2.68
SLC47A1-204ENST00000495425 CCDC180Q9P1Z9 1646 aa31.49■■■□□ 2.63
SLC47A1-204ENST00000495425 DNAJC5BQ9UF47 199 aa30.18■■■□□ 2.42
SLC47A1-204ENST00000495425 RB1CC1Q8TDY2 1594 aa30.15■■■□□ 2.42
SLC47A1-204ENST00000495425 NACADO15069 1562 aa29.82■■■□□ 2.36
SLC47A1-204ENST00000495425 UNC13AQ9UPW8 1703 aa29.48■■■□□ 2.31
SLC47A1-204ENST00000495425 PABPN1Q86U42 306 aaKnown RBP eCLIP29.38■■■□□ 2.29
SLC47A1-204ENST00000495425 MYO15BQ96JP2 1530 aa29.32■■■□□ 2.28
SLC47A1-204ENST00000495425 BICRAQ9NZM4 1560 aa29.27■■■□□ 2.28
SLC47A1-204ENST00000495425 DCAF8L2P0C7V8 631 aa29.2■■■□□ 2.26
SLC47A1-204ENST00000495425 SHROOM4Q9ULL8 1493 aa28.97■■■□□ 2.23
SLC47A1-204ENST00000495425 CC2D2AQ9P2K1 1620 aa28.76■■■□□ 2.19
SLC47A1-204ENST00000495425 DCAF1Q9Y4B6 1507 aa28.73■■■□□ 2.19
SLC47A1-204ENST00000495425 CECR2Q9BXF3 1484 aa28.72■■■□□ 2.19
SLC47A1-204ENST00000495425 ZCCHC6Q5VYS8 1495 aaKnown RBP28.68■■■□□ 2.18
SLC47A1-204ENST00000495425 EIF4G1Q04637 1599 aaKnown RBP28.59■■■□□ 2.17
SLC47A1-204ENST00000495425 SCRIBQ14160 1630 aa28.5■■■□□ 2.15
SLC47A1-204ENST00000495425 DNAJC5Q9H3Z4 198 aa28.16■■■□□ 2.1
SLC47A1-204ENST00000495425 CUX2O14529 1486 aa27.73■■■□□ 2.03
SLC47A1-204ENST00000495425 NCAPD3P42695 1498 aa27.5■■□□□ 1.99
SLC47A1-204ENST00000495425 ERCC6Q03468 1493 aa27.5■■□□□ 1.99
SLC47A1-204ENST00000495425 HMGXB3Q12766 1538 aa27.32■■□□□ 1.96
SLC47A1-204ENST00000495425 ATAD2BQ9ULI0 1458 aa27.32■■□□□ 1.96
SLC47A1-204ENST00000495425 SMARCA2P51531 1590 aa27.26■■□□□ 1.96
SLC47A1-204ENST00000495425 SMARCA4P51532 1647 aa27.2■■□□□ 1.95
SLC47A1-204ENST00000495425 NESP48681 1621 aa27.14■■□□□ 1.94
SLC47A1-204ENST00000495425 THOC2Q8NI27 1593 aaKnown RBP27.12■■□□□ 1.93
SLC47A1-204ENST00000495425 BAZ1BQ9UIG0 1483 aaKnown RBP27.02■■□□□ 1.92
SLC47A1-204ENST00000495425 PEG3Q9GZU2 1588 aa27.01■■□□□ 1.92
SLC47A1-204ENST00000495425 LAMC3Q9Y6N6 1575 aa27.01■■□□□ 1.92
SLC47A1-204ENST00000495425 BAZ1AQ9NRL2 1556 aaPredicted RBP27■■□□□ 1.91
SLC47A1-204ENST00000495425 KIF21AQ7Z4S6 1674 aa26.87■■□□□ 1.89
SLC47A1-204ENST00000495425 PDS5BQ9NTI5 1447 aa26.8■■□□□ 1.88
SLC47A1-204ENST00000495425 MROH2BQ7Z745 1585 aa26.68■■□□□ 1.86
SLC47A1-204ENST00000495425 WDR62O43379 1518 aa26.62■■□□□ 1.85
SLC47A1-204ENST00000495425 MRC2Q9UBG0 1479 aa26.62■■□□□ 1.85
SLC47A1-204ENST00000495425 TRIM41Q8WV44 630 aa26.59■■□□□ 1.85
SLC47A1-204ENST00000495425 CADPSQ9ULU8 1353 aa26.58■■□□□ 1.85
SLC47A1-204ENST00000495425 CEP164Q9UPV0 1460 aa26.4■■□□□ 1.82
SLC47A1-204ENST00000495425 WIZO95785 1651 aa26.34■■□□□ 1.81
SLC47A1-204ENST00000495425 FANCD2Q9BXW9 1451 aa26.3■■□□□ 1.8
SLC47A1-204ENST00000495425 CFTRP13569 1480 aa26.23■■□□□ 1.79
SLC47A1-204ENST00000495425 OSCARQ8IYS5 282 aa26.21■■□□□ 1.79
SLC47A1-204ENST00000495425 URB2Q14146 1524 aaKnown RBP26.13■■□□□ 1.77
SLC47A1-204ENST00000495425 RIMBP3CA6NJZ7 1639 aa26.05■■□□□ 1.76
SLC47A1-204ENST00000495425 RIMBP3BA6NNM3 1639 aa26.05■■□□□ 1.76
SLC47A1-204ENST00000495425 RIMBP3Q9UFD9 1639 aa26.05■■□□□ 1.76
SLC47A1-204ENST00000495425 PRDM2Q13029 1718 aa26.04■■□□□ 1.76
SLC47A1-204ENST00000495425 TOP2AP11388 1531 aaKnown RBP26.04■■□□□ 1.76
SLC47A1-204ENST00000495425 RSF1Q96T23 1441 aaPredicted RBP25.92■■□□□ 1.74
SLC47A1-204ENST00000495425 ARHGEF11O15085 1522 aa25.91■■□□□ 1.74
SLC47A1-204ENST00000495425 IFT140Q96RY7 1462 aa25.9■■□□□ 1.74
SLC47A1-204ENST00000495425 ZNF608Q9ULD9 1512 aaPredicted RBP25.85■■□□□ 1.73
SLC47A1-204ENST00000495425 EIF4G3O43432 1585 aaKnown RBP25.78■■□□□ 1.72
SLC47A1-204ENST00000495425 TOPBP1Q92547 1522 aa25.76■■□□□ 1.71
SLC47A1-204ENST00000495425 ABCC8Q09428 1581 aa25.71■■□□□ 1.71
SLC47A1-204ENST00000495425 CCDC88BA6NC98 1476 aa25.66■■□□□ 1.7
SLC47A1-204ENST00000495425 CHD1O14646 1710 aa25.66■■□□□ 1.7
SLC47A1-204ENST00000495425 DNMBPQ6XZF7 1577 aa25.66■■□□□ 1.7
SLC47A1-204ENST00000495425 TARBP1Q13395 1621 aaKnown RBP25.61■■□□□ 1.69
SLC47A1-204ENST00000495425 ARAP1Q96P48 1450 aa25.6■■□□□ 1.69
SLC47A1-204ENST00000495425 CYB5RLQ6IPT4 315 aa25.57■■□□□ 1.68
SLC47A1-204ENST00000495425 AQRO60306 1485 aaKnown RBP eCLIP25.51■■□□□ 1.67
SLC47A1-204ENST00000495425 POLA1P09884 1462 aaPredicted RBP25.46■■□□□ 1.67
SLC47A1-204ENST00000495425 TRHP20396 242 aaPredicted RBP25.44■■□□□ 1.66
SLC47A1-204ENST00000495425 WDR97A6NE52 1622 aa25.42■■□□□ 1.66
SLC47A1-204ENST00000495425 CLASP1Q7Z460 1538 aa25.39■■□□□ 1.66
SLC47A1-204ENST00000495425 FBLN2P98095 1184 aa25.34■■□□□ 1.65
SLC47A1-204ENST00000495425 SYNJ1O43426 1573 aa25.31■■□□□ 1.64
SLC47A1-204ENST00000495425 SNAPC4Q5SXM2 1469 aa25.3■■□□□ 1.64
SLC47A1-204ENST00000495425 RAD54L2Q9Y4B4 1467 aa25.3■■□□□ 1.64
SLC47A1-204ENST00000495425 MAGI1Q96QZ7 1491 aaPredicted RBP25.28■■□□□ 1.64
SLC47A1-204ENST00000495425 SOGA1O94964 1423 aa25.27■■□□□ 1.64
SLC47A1-204ENST00000495425 TDRD9Q8NDG6 1382 aaKnown RBP25.24■■□□□ 1.63
SLC47A1-204ENST00000495425 FGD5Q6ZNL6 1462 aa25.21■■□□□ 1.63
SLC47A1-204ENST00000495425 GRIN2BQ13224 1484 aa25.18■■□□□ 1.62
SLC47A1-204ENST00000495425 SYNJ2O15056 1496 aa25.17■■□□□ 1.62
SLC47A1-204ENST00000495425 CHMP7Q8WUX9 453 aaPredicted RBP25.13■■□□□ 1.61
SLC47A1-204ENST00000495425 CUX1P39880 1505 aa25.12■■□□□ 1.61
SLC47A1-204ENST00000495425 PBRM1Q86U86 1689 aa25.1■■□□□ 1.61
SLC47A1-204ENST00000495425 AEBP2Q6ZN18 517 aaPredicted RBP25.1■■□□□ 1.61
SLC47A1-204ENST00000495425 GAPVD1Q14C86 1478 aa25.07■■□□□ 1.6
SLC47A1-204ENST00000495425 ABCA5Q8WWZ7 1642 aa25■■□□□ 1.59
SLC47A1-204ENST00000495425 ABCA10Q8WWZ4 1543 aa24.95■■□□□ 1.58
SLC47A1-204ENST00000495425 ERCC6L2Q5T890 1561 aa24.86■■□□□ 1.57
SLC47A1-204ENST00000495425 GRIN2AQ12879 1464 aa24.86■■□□□ 1.57
SLC47A1-204ENST00000495425 ADAMTS12P58397 1594 aa24.83■■□□□ 1.57
SLC47A1-204ENST00000495425 CEP170Q5SW79 1584 aa24.83■■□□□ 1.57
SLC47A1-204ENST00000495425 SHROOM2Q13796 1616 aa24.83■■□□□ 1.56
SLC47A1-204ENST00000495425 NUP160Q12769 1436 aa24.82■■□□□ 1.56
SLC47A1-204ENST00000495425 KIF13AQ9H1H9 1805 aa24.75■■□□□ 1.55
SLC47A1-204ENST00000495425 WRNQ14191 1432 aaPredicted RBP eCLIP24.69■■□□□ 1.54
SLC47A1-204ENST00000495425 FHAD1B1AJZ9 1412 aa24.68■■□□□ 1.54
SLC47A1-204ENST00000495425 BIVM-ERCC5R4GMW8 1640 aa24.66■■□□□ 1.54
SLC47A1-204ENST00000495425 ERICH3Q5RHP9 1530 aa24.65■■□□□ 1.54
SLC47A1-204ENST00000495425 TOP2BQ02880 1626 aa24.62■■□□□ 1.53
SLC47A1-204ENST00000495425 PRG4Q92954 1404 aaPredicted RBP24.53■■□□□ 1.52
SLC47A1-204ENST00000495425 MAPKBP1O60336 1514 aa24.53■■□□□ 1.52
SLC47A1-204ENST00000495425 ABCC10Q5T3U5 1492 aa24.51■■□□□ 1.51
Retrieved 100 of 20,778 RNA–protein pairs in 155.8 ms