Protein–RNA interactions for Protein: A0A0B4J262

TRAV8-6, T-cell receptor alpha variable 8-6 (Fragment), humanhuman

Predictions only

Length 113 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
TRAV8-6A0A0B4J262 AC007192.1-201ENST00000593731 5142 ntAPPRIS P1 TSL 2 BASIC15.15■□□□□ 0.02
TRAV8-6A0A0B4J262 FZD1-201ENST00000287934 6963 ntAPPRIS P1 BASIC15.15■□□□□ 0.02
TRAV8-6A0A0B4J262 SRM-201ENST00000376957 1266 ntAPPRIS P1 TSL 1 (best) BASIC15.15■□□□□ 0.02
TRAV8-6A0A0B4J262 MYD88-205ENST00000424893 1279 ntAPPRIS ALT2 TSL 1 (best) BASIC15.15■□□□□ 0.02
TRAV8-6A0A0B4J262 TYROBP-203ENST00000544690 522 ntTSL 1 (best) BASIC15.15■□□□□ 0.02
TRAV8-6A0A0B4J262 AC011298.3-201ENST00000615796 283 ntBASIC15.15■□□□□ 0.02
TRAV8-6A0A0B4J262 KRTAP5-4-202ENST00000616115 660 ntAPPRIS ALT2 TSL 5 BASIC15.15■□□□□ 0.02
TRAV8-6A0A0B4J262 SRSF4-201ENST00000373795 2387 ntAPPRIS P2 TSL 1 (best) BASIC15.15■□□□□ 0.02
TRAV8-6A0A0B4J262 GTSE1-AS1-202ENST00000623117 1518 ntBASIC15.15■□□□□ 0.02
TRAV8-6A0A0B4J262 PIKFYVE-203ENST00000392202 2039 ntTSL 1 (best) BASIC15.15■□□□□ 0.02
TRAV8-6A0A0B4J262 PHC1-212ENST00000543824 4292 ntAPPRIS P1 TSL 1 (best) BASIC15.15■□□□□ 0.02
TRAV8-6A0A0B4J262 MESP2-201ENST00000341735 1552 ntAPPRIS P1 TSL 1 (best) BASIC15.15■□□□□ 0.02
TRAV8-6A0A0B4J262 PCDH1-201ENST00000287008 4793 ntAPPRIS P3 TSL 5 BASIC15.15■□□□□ 0.02
TRAV8-6A0A0B4J262 MAPK9-207ENST00000452135 4815 ntAPPRIS P5 TSL 5 BASIC15.14■□□□□ 0.01
TRAV8-6A0A0B4J262 SNX4-201ENST00000251775 2513 ntAPPRIS P1 TSL 1 (best) BASIC15.14■□□□□ 0.01
TRAV8-6A0A0B4J262 WTAP-201ENST00000337387 1622 ntTSL 1 (best) BASIC15.14■□□□□ 0.01
TRAV8-6A0A0B4J262 HOXB7-201ENST00000239165 1371 ntAPPRIS P1 TSL 1 (best) BASIC15.14■□□□□ 0.01
TRAV8-6A0A0B4J262 ANHX-202ENST00000545940 3452 ntAPPRIS P1 TSL 5 BASIC15.14■□□□□ 0.01
TRAV8-6A0A0B4J262 CACNB1-203ENST00000394310 1753 ntAPPRIS ALT1 TSL 1 (best) BASIC15.14■□□□□ 0.01
TRAV8-6A0A0B4J262 PPP2R5E-204ENST00000555899 2164 ntAPPRIS ALT1 TSL 1 (best) BASIC15.14■□□□□ 0.01
TRAV8-6A0A0B4J262 AC096677.1-201ENST00000454651 1516 ntTSL 2 BASIC15.14■□□□□ 0.01
TRAV8-6A0A0B4J262 UBA5-208ENST00000473651 1513 ntTSL 5 BASIC15.14■□□□□ 0.01
TRAV8-6A0A0B4J262 PSKH1-202ENST00000570631 1509 ntTSL 1 (best) BASIC15.14■□□□□ 0.01
TRAV8-6A0A0B4J262 PYCR3-207ENST00000495276 2332 ntAPPRIS ALT2 TSL 1 (best) BASIC15.14■□□□□ 0.01
TRAV8-6A0A0B4J262 PYCARD-202ENST00000350605 696 ntTSL 1 (best) BASIC15.14■□□□□ 0.01
TRAV8-6A0A0B4J262 TNFRSF6B-201ENST00000369996 1124 ntAPPRIS P1 TSL 1 (best) BASIC15.14■□□□□ 0.01
TRAV8-6A0A0B4J262 CCDC107-203ENST00000378407 899 ntAPPRIS ALT2 TSL 2 BASIC15.14■□□□□ 0.01
TRAV8-6A0A0B4J262 KRTAP5-1-201ENST00000382171 942 ntAPPRIS P1 BASIC15.14■□□□□ 0.01
TRAV8-6A0A0B4J262 PRICKLE4-201ENST00000394259 939 ntAPPRIS ALT2 TSL 5 BASIC15.14■□□□□ 0.01
TRAV8-6A0A0B4J262 ZNF32-202ENST00000395797 1201 ntAPPRIS P1 TSL 2 BASIC15.14■□□□□ 0.01
TRAV8-6A0A0B4J262 SERBP1P1-201ENST00000396021 1160 ntBASIC15.14■□□□□ 0.01
TRAV8-6A0A0B4J262 AC105935.1-201ENST00000424174 422 ntTSL 3 BASIC15.14■□□□□ 0.01
TRAV8-6A0A0B4J262 TGFBR3L-202ENST00000565886 1260 ntAPPRIS P1 TSL 5 BASIC15.14■□□□□ 0.01
TRAV8-6A0A0B4J262 AC010336.5-201ENST00000594308 317 ntTSL 3 BASIC15.14■□□□□ 0.01
TRAV8-6A0A0B4J262 SCUBE1-208ENST00000615096 1119 ntTSL 2 BASIC15.14■□□□□ 0.01
TRAV8-6A0A0B4J262 TRABD2A-201ENST00000335459 1844 ntTSL 1 (best) BASIC15.14■□□□□ 0.01
TRAV8-6A0A0B4J262 KAZN-208ENST00000636203 6874 ntTSL 5 BASIC15.14■□□□□ 0.01
TRAV8-6A0A0B4J262 SOHLH1-201ENST00000298466 1987 ntAPPRIS P3 TSL 1 (best) BASIC15.14■□□□□ 0.01
TRAV8-6A0A0B4J262 TMEM198B-205ENST00000487582 1581 ntTSL 1 (best) BASIC15.14■□□□□ 0.01
TRAV8-6A0A0B4J262 STARD3-201ENST00000336308 2132 ntAPPRIS P1 TSL 1 (best) BASIC15.14■□□□□ 0.01
TRAV8-6A0A0B4J262 CLIP2-201ENST00000223398 5563 ntAPPRIS P1 TSL 5 BASIC15.14■□□□□ 0.01
TRAV8-6A0A0B4J262 MAP4K4-202ENST00000324219 7526 ntTSL 5 BASIC15.14■□□□□ 0.01
TRAV8-6A0A0B4J262 LEMD2-201ENST00000293760 2958 ntAPPRIS P1 TSL 1 (best) BASIC15.14■□□□□ 0.01
TRAV8-6A0A0B4J262 CACNB1-201ENST00000344140 1889 ntTSL 1 (best) BASIC15.14■□□□□ 0.01
TRAV8-6A0A0B4J262 DENND2D-202ENST00000369752 1894 ntAPPRIS ALT2 TSL 2 BASIC15.14■□□□□ 0.01
TRAV8-6A0A0B4J262 STK10-201ENST00000176763 6060 ntAPPRIS P1 TSL 1 (best) BASIC15.14■□□□□ 0.01
TRAV8-6A0A0B4J262 PFKFB3-204ENST00000379785 2181 ntTSL 5 BASIC15.14■□□□□ 0.01
TRAV8-6A0A0B4J262 CYB561-213ENST00000581573 2344 ntAPPRIS P1 TSL 1 (best) BASIC15.14■□□□□ 0.01
TRAV8-6A0A0B4J262 TIMM50-201ENST00000314349 1612 ntAPPRIS P2 TSL 1 (best) BASIC15.14■□□□□ 0.01
TRAV8-6A0A0B4J262 MRPS2-202ENST00000371785 1640 ntAPPRIS P1 TSL 3 BASIC15.14■□□□□ 0.01
TRAV8-6A0A0B4J262 FBXL7-202ENST00000504595 4562 ntAPPRIS P1 TSL 1 (best) BASIC15.13■□□□□ 0.01
TRAV8-6A0A0B4J262 DPF1-203ENST00000414789 1960 ntTSL 2 BASIC15.13■□□□□ 0.01
TRAV8-6A0A0B4J262 KRT18P55-201ENST00000577198 1950 ntTSL 1 (best) BASIC15.13■□□□□ 0.01
TRAV8-6A0A0B4J262 GRB10-206ENST00000402497 2289 ntTSL 5 BASIC15.13■□□□□ 0.01
TRAV8-6A0A0B4J262 Z98882.1-201ENST00000622160 2253 ntBASIC15.13■□□□□ 0.01
TRAV8-6A0A0B4J262 KBTBD11-201ENST00000320248 6710 ntAPPRIS P1 TSL 1 (best) BASIC15.13■□□□□ 0.01
TRAV8-6A0A0B4J262 SCARB1-201ENST00000261693 2611 ntAPPRIS P1 TSL 1 (best) BASIC15.13■□□□□ 0.01
TRAV8-6A0A0B4J262 AGPAT5-201ENST00000285518 3685 ntAPPRIS P1 TSL 1 (best) BASIC15.13■□□□□ 0.01
TRAV8-6A0A0B4J262 UNC93B3-201ENST00000308076 687 ntBASIC15.13■□□□□ 0.01
TRAV8-6A0A0B4J262 DCTPP1-201ENST00000319285 1222 ntAPPRIS P1 TSL 1 (best) BASIC15.13■□□□□ 0.01
TRAV8-6A0A0B4J262 UBE2C-202ENST00000335046 737 ntTSL 2 BASIC15.13■□□□□ 0.01
TRAV8-6A0A0B4J262 UBE2J2-203ENST00000360466 1047 ntAPPRIS P1 TSL 2 BASIC15.13■□□□□ 0.01
TRAV8-6A0A0B4J262 CEP55-201ENST00000371485 2638 ntAPPRIS P1 TSL 1 (best) BASIC15.13■□□□□ 0.01
TRAV8-6A0A0B4J262 STK19-202ENST00000375333 1557 ntAPPRIS P3 TSL 1 (best) BASIC15.13■□□□□ 0.01
TRAV8-6A0A0B4J262 ACYP2-202ENST00000394666 993 ntAPPRIS P1 TSL 1 (best) BASIC15.13■□□□□ 0.01
TRAV8-6A0A0B4J262 ZNF74-203ENST00000403682 2789 ntTSL 1 (best) BASIC15.13■□□□□ 0.01
TRAV8-6A0A0B4J262 IPO9-AS1-201ENST00000413035 839 ntTSL 3 BASIC15.13■□□□□ 0.01
TRAV8-6A0A0B4J262 CDKN3-207ENST00000543789 610 ntTSL 5 BASIC15.13■□□□□ 0.01
TRAV8-6A0A0B4J262 SNAI3-AS1-201ENST00000563261 998 ntTSL 1 (best) BASIC15.13■□□□□ 0.01
TRAV8-6A0A0B4J262 ZNF584-205ENST00000596281 575 ntTSL 2 BASIC15.13■□□□□ 0.01
TRAV8-6A0A0B4J262 LINC01632-201ENST00000615763 496 ntTSL 3 BASIC15.13■□□□□ 0.01
TRAV8-6A0A0B4J262 RALB-208ENST00000631312 311 ntTSL 5 BASIC15.13■□□□□ 0.01
TRAV8-6A0A0B4J262 AC093762.1-201ENST00000641981 837 ntAPPRIS P1 BASIC15.13■□□□□ 0.01
TRAV8-6A0A0B4J262 DISC1-205ENST00000366636 2224 ntAPPRIS P4 TSL 1 (best) BASIC15.13■□□□□ 0.01
TRAV8-6A0A0B4J262 PCBP3-206ENST00000400314 2202 ntAPPRIS P2 TSL 5 BASIC15.13■□□□□ 0.01
TRAV8-6A0A0B4J262 SUMF2-208ENST00000434526 2052 ntAPPRIS P3 TSL 1 (best) BASIC15.13■□□□□ 0.01
TRAV8-6A0A0B4J262 TBC1D22A-206ENST00000407381 1949 ntTSL 5 BASIC15.13■□□□□ 0.01
TRAV8-6A0A0B4J262 GATA6-AS1-202ENST00000583490 1788 ntTSL 2 BASIC15.13■□□□□ 0.01
TRAV8-6A0A0B4J262 LRRC1-202ENST00000370888 3180 ntAPPRIS P1 TSL 1 (best) BASIC15.13■□□□□ 0.01
TRAV8-6A0A0B4J262 ABHD16B-201ENST00000369916 1491 ntAPPRIS P1 BASIC15.13■□□□□ 0.01
TRAV8-6A0A0B4J262 CCNG2-204ENST00000502280 1459 ntAPPRIS P1 TSL 2 BASIC15.13■□□□□ 0.01
TRAV8-6A0A0B4J262 NEIL3-201ENST00000264596 2408 ntAPPRIS P1 TSL 1 (best) BASIC15.13■□□□□ 0.01
TRAV8-6A0A0B4J262 RAX2-201ENST00000555633 2414 ntAPPRIS P1 TSL 1 (best) BASIC15.13■□□□□ 0.01
TRAV8-6A0A0B4J262 FEM1AP4-201ENST00000443167 1987 ntBASIC15.13■□□□□ 0.01
TRAV8-6A0A0B4J262 PAQR6-215ENST00000623241 1961 ntTSL 1 (best) BASIC15.13■□□□□ 0.01
TRAV8-6A0A0B4J262 AC007326.4-201ENST00000638240 1669 ntAPPRIS P1 TSL 5 BASIC15.12■□□□□ 0.01
TRAV8-6A0A0B4J262 TBX1-203ENST00000359500 1538 ntAPPRIS ALT2 TSL 1 (best) BASIC15.12■□□□□ 0.01
TRAV8-6A0A0B4J262 TMEM44-211ENST00000473092 1508 ntTSL 1 (best) BASIC15.12■□□□□ 0.01
TRAV8-6A0A0B4J262 ARSA-202ENST00000356098 1895 ntAPPRIS P1 TSL 1 (best) BASIC15.12■□□□□ 0.01
TRAV8-6A0A0B4J262 AC018445.3-201ENST00000624177 1945 ntBASIC15.12■□□□□ 0.01
TRAV8-6A0A0B4J262 NUDT16L1-204ENST00000586536 1406 ntTSL 2 BASIC15.12■□□□□ 0.01
TRAV8-6A0A0B4J262 MYO9A-214ENST00000566885 5111 ntTSL 1 (best) BASIC15.12■□□□□ 0.01
TRAV8-6A0A0B4J262 KLHL2-201ENST00000226725 3134 ntAPPRIS P3 TSL 1 (best) BASIC15.12■□□□□ 0.01
TRAV8-6A0A0B4J262 ZSWIM4-201ENST00000254323 4339 ntAPPRIS P1 TSL 2 BASIC15.12■□□□□ 0.01
TRAV8-6A0A0B4J262 C19orf60-201ENST00000358607 839 ntAPPRIS P3 TSL 1 (best) BASIC15.12■□□□□ 0.01
TRAV8-6A0A0B4J262 HM13-AS1-201ENST00000412178 489 ntTSL 3 BASIC15.12■□□□□ 0.01
TRAV8-6A0A0B4J262 C19orf60-202ENST00000450195 702 ntAPPRIS ALT2 TSL 1 (best) BASIC15.12■□□□□ 0.01
TRAV8-6A0A0B4J262 AC087239.1-201ENST00000622671 572 ntBASIC15.12■□□□□ 0.01
TRAV8-6A0A0B4J262 AC136469.2-201ENST00000623944 1028 ntBASIC15.12■□□□□ 0.01
TRAV8-6A0A0B4J262 POLD2-218ENST00000610533 1619 ntTSL 1 (best) BASIC15.12■□□□□ 0.01
Retrieved 100 of 98,524 protein–RNA pairs in 42.6 ms