Protein–RNA interactions for Protein: A0A0A0MS02

TRGV1, T-cell receptor gamma variable 1 (non-functional) (Fragment), humanhuman

Predictions only

Length 117 aa.

Download Table  
Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
TRGV1A0A0A0MS02 PAX1-202ENST00000444366 1850 ntAPPRIS ALT2 TSL 2 BASIC14.98□□□□□ -0.01
TRGV1A0A0A0MS02 ADGRG2-210ENST00000379878 4803 ntTSL 1 (best) BASIC14.98□□□□□ -0.01
TRGV1A0A0A0MS02 NDUFB2-201ENST00000247866 504 ntAPPRIS P1 TSL 1 (best) BASIC14.98□□□□□ -0.01
TRGV1A0A0A0MS02 COX20-201ENST00000366528 568 ntTSL 2 BASIC14.98□□□□□ -0.01
TRGV1A0A0A0MS02 TMEM61-201ENST00000371268 1097 ntAPPRIS P1 TSL 1 (best) BASIC14.98□□□□□ -0.01
TRGV1A0A0A0MS02 MFSD14C-201ENST00000375223 619 ntAPPRIS ALT2 TSL 5 BASIC14.98□□□□□ -0.01
TRGV1A0A0A0MS02 POU5F1P4-201ENST00000413175 1085 ntBASIC14.98□□□□□ -0.01
TRGV1A0A0A0MS02 AC093627.4-202ENST00000479592 591 ntTSL 4 BASIC14.98□□□□□ -0.01
TRGV1A0A0A0MS02 KRT18P14-201ENST00000534205 1250 ntBASIC14.98□□□□□ -0.01
TRGV1A0A0A0MS02 BEX2-204ENST00000536889 1077 ntTSL 2 BASIC14.98□□□□□ -0.01
TRGV1A0A0A0MS02 ORAI3-202ENST00000562699 628 ntTSL 2 BASIC14.98□□□□□ -0.01
TRGV1A0A0A0MS02 CCDC92B-201ENST00000575506 885 ntBASIC14.98□□□□□ -0.01
TRGV1A0A0A0MS02 TERF1P2-201ENST00000583350 1212 ntBASIC14.98□□□□□ -0.01
TRGV1A0A0A0MS02 RAB43-208ENST00000615093 783 ntTSL 5 BASIC14.98□□□□□ -0.01
TRGV1A0A0A0MS02 MCTP1-218ENST00000515393 5396 ntAPPRIS P3 TSL 1 (best) BASIC14.98□□□□□ -0.01
TRGV1A0A0A0MS02 ARHGAP26-201ENST00000274498 6862 ntAPPRIS P3 TSL 1 (best) BASIC14.98□□□□□ -0.01
TRGV1A0A0A0MS02 PPCS-203ENST00000372561 1431 ntAPPRIS P1 TSL 1 (best) BASIC14.98□□□□□ -0.01
TRGV1A0A0A0MS02 TSPAN4-206ENST00000397408 1430 ntAPPRIS P1 TSL 2 BASIC14.98□□□□□ -0.01
TRGV1A0A0A0MS02 BCR-201ENST00000305877 7082 ntAPPRIS P1 TSL 1 (best) BASIC14.98□□□□□ -0.01
TRGV1A0A0A0MS02 OSR2-203ENST00000457907 2126 ntTSL 2 BASIC14.98□□□□□ -0.01
TRGV1A0A0A0MS02 ARHGEF28-204ENST00000437974 5792 ntAPPRIS P3 TSL 1 (best) BASIC14.98□□□□□ -0.01
TRGV1A0A0A0MS02 BASP1-201ENST00000322611 1878 ntAPPRIS P1 TSL 1 (best) BASIC14.97□□□□□ -0.01
TRGV1A0A0A0MS02 SQLE-206ENST00000523430 1879 ntTSL 2 BASIC14.97□□□□□ -0.01
TRGV1A0A0A0MS02 MME-202ENST00000382989 1319 ntTSL 1 (best) BASIC14.97□□□□□ -0.01
TRGV1A0A0A0MS02 ITGBL1-206ENST00000618057 2368 ntTSL 1 (best) BASIC14.97□□□□□ -0.01
TRGV1A0A0A0MS02 GATA1-202ENST00000376670 1497 ntAPPRIS P1 TSL 1 (best) BASIC14.97□□□□□ -0.01
TRGV1A0A0A0MS02 HLA-G-204ENST00000376828 1490 ntAPPRIS ALT2 BASIC14.97□□□□□ -0.01
TRGV1A0A0A0MS02 MEIS2-207ENST00000557796 2666 ntTSL 5 BASIC14.97□□□□□ -0.01
TRGV1A0A0A0MS02 NEBL-AS1-202ENST00000439097 661 ntTSL 2 BASIC14.97□□□□□ -0.01
TRGV1A0A0A0MS02 AC093833.1-201ENST00000442821 553 ntTSL 5 BASIC14.97□□□□□ -0.01
TRGV1A0A0A0MS02 AP002748.1-201ENST00000504911 580 ntTSL 3 BASIC14.97□□□□□ -0.01
TRGV1A0A0A0MS02 TESC-206ENST00000541210 936 ntTSL 3 BASIC14.97□□□□□ -0.01
TRGV1A0A0A0MS02 MSRB1-201ENST00000361871 1423 ntAPPRIS P2 TSL 1 (best) BASIC14.97□□□□□ -0.01
TRGV1A0A0A0MS02 NAAA-201ENST00000286733 1900 ntAPPRIS P2 TSL 5 BASIC14.97□□□□□ -0.01
TRGV1A0A0A0MS02 AC110285.2-201ENST00000571724 1565 ntTSL 2 BASIC14.97□□□□□ -0.01
TRGV1A0A0A0MS02 SLC25A27-202ENST00000411689 2526 ntTSL 1 (best) BASIC14.97□□□□□ -0.01
TRGV1A0A0A0MS02 PCED1A-202ENST00000360652 2016 ntAPPRIS P1 TSL 1 (best) BASIC14.97□□□□□ -0.01
TRGV1A0A0A0MS02 USP39-203ENST00000409470 2034 ntAPPRIS P1 TSL 1 (best) BASIC14.97□□□□□ -0.01
TRGV1A0A0A0MS02 BID-215ENST00000622694 2199 ntAPPRIS P1 TSL 1 (best) BASIC14.97□□□□□ -0.01
TRGV1A0A0A0MS02 DAPK3-201ENST00000301264 2105 ntAPPRIS P1 TSL 1 (best) BASIC14.96□□□□□ -0.01
TRGV1A0A0A0MS02 DYNC1I1-211ENST00000537881 2146 ntTSL 5 BASIC14.96□□□□□ -0.01
TRGV1A0A0A0MS02 SLAIN1-206ENST00000418532 2855 ntAPPRIS ALT2 TSL 5 BASIC14.96□□□□□ -0.01
TRGV1A0A0A0MS02 TRIM3-202ENST00000359518 3042 ntAPPRIS P1 TSL 5 BASIC14.96□□□□□ -0.01
TRGV1A0A0A0MS02 PDZRN4-202ENST00000402685 3347 ntAPPRIS P1 TSL 2 BASIC14.96□□□□□ -0.01
TRGV1A0A0A0MS02 TTC34-201ENST00000401095 8814 ntAPPRIS ALT2 TSL 5 BASIC14.96□□□□□ -0.01
TRGV1A0A0A0MS02 TRIB3-201ENST00000217233 2499 ntAPPRIS P3 TSL 1 (best) BASIC14.96□□□□□ -0.01
TRGV1A0A0A0MS02 TPSG1-201ENST00000234798 1108 ntAPPRIS P1 TSL 1 (best) BASIC14.96□□□□□ -0.01
TRGV1A0A0A0MS02 JSRP1-201ENST00000300961 1138 ntAPPRIS P1 TSL 2 BASIC14.96□□□□□ -0.01
TRGV1A0A0A0MS02 TCTEX1D4-201ENST00000339355 763 ntAPPRIS P1 BASIC14.96□□□□□ -0.01
TRGV1A0A0A0MS02 METTL23-201ENST00000341249 1155 ntAPPRIS P1 TSL 1 (best) BASIC14.96□□□□□ -0.01
TRGV1A0A0A0MS02 EFCAB6-202ENST00000356087 1129 ntTSL 5 BASIC14.96□□□□□ -0.01
TRGV1A0A0A0MS02 RTCA-202ENST00000370126 538 ntTSL 1 (best) BASIC14.96□□□□□ -0.01
TRGV1A0A0A0MS02 LINC00472-204ENST00000436803 667 ntTSL 5 BASIC14.96□□□□□ -0.01
TRGV1A0A0A0MS02 AC093817.1-201ENST00000507296 812 ntTSL 3 BASIC14.96□□□□□ -0.01
TRGV1A0A0A0MS02 FAM66A-201ENST00000525829 921 ntTSL 2 BASIC14.96□□□□□ -0.01
TRGV1A0A0A0MS02 AC138907.5-202ENST00000569484 235 ntBASIC14.96□□□□□ -0.01
TRGV1A0A0A0MS02 AC104187.1-201ENST00000607510 612 ntBASIC14.96□□□□□ -0.01
TRGV1A0A0A0MS02 SLC35A3-213ENST00000638988 1286 ntTSL 5 BASIC14.96□□□□□ -0.01
TRGV1A0A0A0MS02 MAPK8IP3-202ENST00000356010 4456 ntTSL 5 BASIC14.96□□□□□ -0.01
TRGV1A0A0A0MS02 DNAJA4-202ENST00000394852 3116 ntAPPRIS P1 TSL 1 (best) BASIC14.96□□□□□ -0.02
TRGV1A0A0A0MS02 POMGNT2-202ENST00000441964 2531 ntAPPRIS P1 TSL 4 BASIC14.96□□□□□ -0.02
TRGV1A0A0A0MS02 GJC2-201ENST00000366714 2243 ntAPPRIS P1 TSL 1 (best) BASIC14.96□□□□□ -0.02
TRGV1A0A0A0MS02 C14orf79-207ENST00000550614 1912 ntAPPRIS ALT2 TSL 1 (best) BASIC14.96□□□□□ -0.02
TRGV1A0A0A0MS02 NUTF2-201ENST00000219169 2321 ntAPPRIS P1 TSL 1 (best) BASIC14.95□□□□□ -0.02
TRGV1A0A0A0MS02 ZNF584-201ENST00000306910 2332 ntAPPRIS P1 TSL 1 (best) BASIC14.95□□□□□ -0.02
TRGV1A0A0A0MS02 TMC7-205ENST00000569532 2738 ntTSL 2 BASIC14.95□□□□□ -0.02
TRGV1A0A0A0MS02 DCAF4-202ENST00000358377 2024 ntAPPRIS P4 TSL 1 (best) BASIC14.95□□□□□ -0.02
TRGV1A0A0A0MS02 NUDT16L1-202ENST00000405142 2040 ntTSL 1 (best) BASIC14.95□□□□□ -0.02
TRGV1A0A0A0MS02 TALDO1-201ENST00000319006 1346 ntAPPRIS P1 TSL 1 (best) BASIC14.95□□□□□ -0.02
TRGV1A0A0A0MS02 CAMK2B-207ENST00000358707 1895 ntTSL 1 (best) BASIC14.95□□□□□ -0.02
TRGV1A0A0A0MS02 ODC1-201ENST00000234111 2653 ntAPPRIS P1 TSL 1 (best) BASIC14.95□□□□□ -0.02
TRGV1A0A0A0MS02 CDCP1-202ENST00000425231 1416 ntAPPRIS ALT2 TSL 1 (best) BASIC14.95□□□□□ -0.02
TRGV1A0A0A0MS02 DCAF8-211ENST00000475733 1426 ntTSL 1 (best) BASIC14.95□□□□□ -0.02
TRGV1A0A0A0MS02 TNIP1-205ENST00000518977 2200 ntAPPRIS ALT2 TSL 1 (best) BASIC14.95□□□□□ -0.02
TRGV1A0A0A0MS02 UCHL1-201ENST00000284440 1172 ntAPPRIS P1 TSL 1 (best) BASIC14.95□□□□□ -0.02
TRGV1A0A0A0MS02 MAD2L2-204ENST00000376667 872 ntAPPRIS P1 TSL 2 BASIC14.95□□□□□ -0.02
TRGV1A0A0A0MS02 MT1M-201ENST00000379818 829 ntAPPRIS P1 TSL 1 (best) BASIC14.95□□□□□ -0.02
TRGV1A0A0A0MS02 C19orf12-205ENST00000392278 895 ntTSL 2 BASIC14.95□□□□□ -0.02
TRGV1A0A0A0MS02 AC073343.2-201ENST00000413182 548 ntTSL 4 BASIC14.95□□□□□ -0.02
TRGV1A0A0A0MS02 UCHL1-210ENST00000512788 785 ntTSL 3 BASIC14.95□□□□□ -0.02
TRGV1A0A0A0MS02 AP006621.1-202ENST00000528982 464 ntTSL 2 BASIC14.95□□□□□ -0.02
TRGV1A0A0A0MS02 DUX4L2-201ENST00000561772 1275 ntBASIC14.95□□□□□ -0.02
TRGV1A0A0A0MS02 GABARAPL2-205ENST00000568455 646 ntTSL 3 BASIC14.95□□□□□ -0.02
TRGV1A0A0A0MS02 HSD17B14-204ENST00000599157 991 ntTSL 3 BASIC14.95□□□□□ -0.02
TRGV1A0A0A0MS02 GSX2-205ENST00000611459 1262 ntAPPRIS P1 TSL 1 (best) BASIC14.95□□□□□ -0.02
TRGV1A0A0A0MS02 DUX4-206ENST00000616166 1275 ntAPPRIS P2 BASIC14.95□□□□□ -0.02
TRGV1A0A0A0MS02 DUX4L6-201ENST00000626483 1275 ntBASIC14.95□□□□□ -0.02
TRGV1A0A0A0MS02 DUX4L1-201ENST00000627662 1275 ntBASIC14.95□□□□□ -0.02
TRGV1A0A0A0MS02 DUX4L8-201ENST00000629013 1275 ntBASIC14.95□□□□□ -0.02
TRGV1A0A0A0MS02 DUX4L3-201ENST00000630187 1275 ntBASIC14.95□□□□□ -0.02
TRGV1A0A0A0MS02 DUX4L7-201ENST00000630678 1275 ntBASIC14.95□□□□□ -0.02
TRGV1A0A0A0MS02 APOC3-205ENST00000630701 541 ntTSL 1 (best) BASIC14.95□□□□□ -0.02
TRGV1A0A0A0MS02 DUX4L5-201ENST00000630834 1275 ntBASIC14.95□□□□□ -0.02
TRGV1A0A0A0MS02 FAM69B-202ENST00000371692 1668 ntAPPRIS P1 TSL 1 (best) BASIC14.95□□□□□ -0.02
TRGV1A0A0A0MS02 PANO1-201ENST00000620120 1680 ntAPPRIS P1 BASIC14.95□□□□□ -0.02
TRGV1A0A0A0MS02 DNAJB5-203ENST00000453597 2589 ntTSL 2 BASIC14.95□□□□□ -0.02
TRGV1A0A0A0MS02 ZC3HAV1L-201ENST00000275766 1753 ntAPPRIS P1 TSL 1 (best) BASIC14.95□□□□□ -0.02
TRGV1A0A0A0MS02 RARRES2-202ENST00000466675 1618 ntAPPRIS P1 TSL 2 BASIC14.95□□□□□ -0.02
TRGV1A0A0A0MS02 ALG1-201ENST00000262374 2132 ntAPPRIS P1 TSL 1 (best) BASIC14.95□□□□□ -0.02
TRGV1A0A0A0MS02 KCNMA1-278ENST00000640141 5705 ntAPPRIS ALT2 TSL 5 BASIC14.95□□□□□ -0.02
Retrieved 100 of 98,524 protein–RNA pairs in 29.2 ms