Protein–RNA interactions for Protein: S4R434

TMEM56-RWDD3, TMEM56-RWDD3 readthrough, humanhuman

Predictions only

Length 201 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
TMEM56-RWDD3S4R434 FAM129C-207ENST00000599124 1918 ntAPPRIS ALT2 TSL 1 (best) BASIC16.94■□□□□ 0.3
TMEM56-RWDD3S4R434 ROCK2-202ENST00000315872 8292 ntAPPRIS P1 TSL 1 (best) BASIC16.94■□□□□ 0.3
TMEM56-RWDD3S4R434 HSD11B1L-201ENST00000301382 1457 ntTSL 1 (best) BASIC16.94■□□□□ 0.3
TMEM56-RWDD3S4R434 RNF38-204ENST00000357058 5254 ntAPPRIS P1 TSL 5 BASIC16.94■□□□□ 0.3
TMEM56-RWDD3S4R434 UBE2H-201ENST00000355621 5151 ntAPPRIS P1 TSL 1 (best) BASIC16.94■□□□□ 0.3
TMEM56-RWDD3S4R434 HYI-204ENST00000372432 1066 ntTSL 1 (best) BASIC16.94■□□□□ 0.3
TMEM56-RWDD3S4R434 CKLF-205ENST00000417030 628 ntAPPRIS ALT2 TSL 4 BASIC16.94■□□□□ 0.3
TMEM56-RWDD3S4R434 LYSMD2-202ENST00000454181 1228 ntTSL 1 (best) BASIC16.94■□□□□ 0.3
TMEM56-RWDD3S4R434 VAMP2-204ENST00000488857 874 ntAPPRIS ALT1 TSL 3 BASIC16.94■□□□□ 0.3
TMEM56-RWDD3S4R434 TUSC3-209ENST00000509380 1266 ntTSL 5 BASIC16.94■□□□□ 0.3
TMEM56-RWDD3S4R434 DTWD2-204ENST00000515439 1275 ntTSL 5 BASIC16.94■□□□□ 0.3
TMEM56-RWDD3S4R434 NEURL1B-203ENST00000522853 1263 ntTSL 1 (best) BASIC16.94■□□□□ 0.3
TMEM56-RWDD3S4R434 DUX4L19-201ENST00000557448 1267 ntBASIC16.94■□□□□ 0.3
TMEM56-RWDD3S4R434 TRAPPC6A-205ENST00000592647 514 ntTSL 2 BASIC16.94■□□□□ 0.3
TMEM56-RWDD3S4R434 AC011298.3-201ENST00000615796 283 ntBASIC16.94■□□□□ 0.3
TMEM56-RWDD3S4R434 PRMT2-210ENST00000458387 1874 ntTSL 1 (best) BASIC16.94■□□□□ 0.3
TMEM56-RWDD3S4R434 CALY-201ENST00000252939 2271 ntAPPRIS P1 TSL 1 (best) BASIC16.94■□□□□ 0.3
TMEM56-RWDD3S4R434 ACP4-201ENST00000270593 1347 ntAPPRIS P1 TSL 1 (best) BASIC16.94■□□□□ 0.3
TMEM56-RWDD3S4R434 PRPS1-203ENST00000372428 1748 ntTSL 2 BASIC16.93■□□□□ 0.3
TMEM56-RWDD3S4R434 C22orf39-206ENST00000611555 1977 ntTSL 1 (best) BASIC16.93■□□□□ 0.3
TMEM56-RWDD3S4R434 NFIB-207ENST00000397579 3129 ntTSL 5 BASIC16.93■□□□□ 0.3
TMEM56-RWDD3S4R434 RGS11-204ENST00000397770 2390 ntAPPRIS P1 TSL 1 (best) BASIC16.93■□□□□ 0.3
TMEM56-RWDD3S4R434 TP53RK-201ENST00000372102 2012 ntTSL 1 (best) BASIC16.93■□□□□ 0.3
TMEM56-RWDD3S4R434 HSPE1-201ENST00000233893 950 ntAPPRIS P1 TSL 1 (best) BASIC16.93■□□□□ 0.3
TMEM56-RWDD3S4R434 TESC-201ENST00000335209 1041 ntAPPRIS P1 TSL 1 (best) BASIC16.93■□□□□ 0.3
TMEM56-RWDD3S4R434 AC103702.2-201ENST00000433510 1270 ntTSL 2 BASIC16.93■□□□□ 0.3
TMEM56-RWDD3S4R434 AL512631.2-201ENST00000604634 923 ntBASIC16.93■□□□□ 0.3
TMEM56-RWDD3S4R434 LIMS2-207ENST00000409808 2315 ntAPPRIS ALT1 TSL 5 BASIC16.93■□□□□ 0.3
TMEM56-RWDD3S4R434 RBM6-204ENST00000422955 2324 ntTSL 2 BASIC16.93■□□□□ 0.3
TMEM56-RWDD3S4R434 KLHL11-201ENST00000319121 2383 ntAPPRIS P1 TSL 1 (best) BASIC16.93■□□□□ 0.3
TMEM56-RWDD3S4R434 KCNH6-203ENST00000580652 1703 ntTSL 1 (best) BASIC16.93■□□□□ 0.3
TMEM56-RWDD3S4R434 PTPN11-202ENST00000392597 1876 ntTSL 1 (best) BASIC16.93■□□□□ 0.3
TMEM56-RWDD3S4R434 PGAM5-203ENST00000498926 2834 ntAPPRIS P1 TSL 2 BASIC16.92■□□□□ 0.3
TMEM56-RWDD3S4R434 SLC25A39-201ENST00000225308 1607 ntAPPRIS P3 TSL 1 (best) BASIC16.92■□□□□ 0.3
TMEM56-RWDD3S4R434 DOK1-201ENST00000233668 2555 ntAPPRIS P1 TSL 1 (best) BASIC16.92■□□□□ 0.3
TMEM56-RWDD3S4R434 ASL-203ENST00000380839 1765 ntTSL 5 BASIC16.92■□□□□ 0.3
TMEM56-RWDD3S4R434 CCT5-205ENST00000506600 1939 ntTSL 2 BASIC16.92■□□□□ 0.3
TMEM56-RWDD3S4R434 NFIL3-201ENST00000297689 2085 ntAPPRIS P1 TSL 1 (best) BASIC16.92■□□□□ 0.3
TMEM56-RWDD3S4R434 BX005040.4-201ENST00000637145 1518 ntBASIC16.92■□□□□ 0.3
TMEM56-RWDD3S4R434 OR10C1-203ENST00000444197 1672 ntAPPRIS P1 BASIC16.92■□□□□ 0.3
TMEM56-RWDD3S4R434 CDH5-202ENST00000539168 1672 ntTSL 2 BASIC16.92■□□□□ 0.3
TMEM56-RWDD3S4R434 TAF4-201ENST00000252996 4628 ntAPPRIS P1 TSL 1 (best) BASIC16.92■□□□□ 0.3
TMEM56-RWDD3S4R434 NDOR1-204ENST00000458322 1829 ntTSL 1 (best) BASIC16.92■□□□□ 0.3
TMEM56-RWDD3S4R434 AL590128.2-201ENST00000442889 415 ntTSL 3 BASIC16.92■□□□□ 0.3
TMEM56-RWDD3S4R434 QDPR-206ENST00000508623 601 ntTSL 3 BASIC16.92■□□□□ 0.3
TMEM56-RWDD3S4R434 MRGPRF-201ENST00000309099 2295 ntAPPRIS P1 TSL 1 (best) BASIC16.92■□□□□ 0.3
TMEM56-RWDD3S4R434 BIN2-210ENST00000615107 2255 ntAPPRIS P1 TSL 1 (best) BASIC16.92■□□□□ 0.3
TMEM56-RWDD3S4R434 PPCS-203ENST00000372561 1431 ntAPPRIS P1 TSL 1 (best) BASIC16.92■□□□□ 0.3
TMEM56-RWDD3S4R434 ACHE-207ENST00000428317 2159 ntAPPRIS P1 TSL 1 (best) BASIC16.92■□□□□ 0.3
TMEM56-RWDD3S4R434 TUBA4A-202ENST00000392088 2499 ntTSL 2 BASIC16.92■□□□□ 0.3
TMEM56-RWDD3S4R434 MRPL37-202ENST00000360840 1483 ntAPPRIS P1 TSL 1 (best) BASIC16.92■□□□□ 0.3
TMEM56-RWDD3S4R434 LBX2-203ENST00000460508 1452 ntTSL 1 (best) BASIC16.92■□□□□ 0.3
TMEM56-RWDD3S4R434 GTF2IRD2B-208ENST00000619142 1932 ntTSL 1 (best) BASIC16.92■□□□□ 0.3
TMEM56-RWDD3S4R434 AL390879.2-201ENST00000424306 2222 ntTSL 2 BASIC16.92■□□□□ 0.3
TMEM56-RWDD3S4R434 NRXN1-226ENST00000626899 2543 ntTSL 2 BASIC16.92■□□□□ 0.3
TMEM56-RWDD3S4R434 BACE2-201ENST00000328735 2824 ntTSL 1 (best) BASIC16.92■□□□□ 0.3
TMEM56-RWDD3S4R434 NXN-201ENST00000336868 3036 ntAPPRIS P1 TSL 1 (best) BASIC16.91■□□□□ 0.3
TMEM56-RWDD3S4R434 AC011484.1-201ENST00000377652 1995 ntBASIC16.91■□□□□ 0.3
TMEM56-RWDD3S4R434 CIRBP-225ENST00000589710 1835 ntTSL 2 BASIC16.91■□□□□ 0.3
TMEM56-RWDD3S4R434 DHRS2-202ENST00000344777 1678 ntAPPRIS ALT2 TSL 1 (best) BASIC16.91■□□□□ 0.3
TMEM56-RWDD3S4R434 ENKD1-206ENST00000602644 1353 ntTSL 5 BASIC16.91■□□□□ 0.3
TMEM56-RWDD3S4R434 ABHD12B-201ENST00000337334 1708 ntAPPRIS ALT2 TSL 1 (best) BASIC16.91■□□□□ 0.3
TMEM56-RWDD3S4R434 AC009237.3-201ENST00000393279 1427 ntBASIC16.91■□□□□ 0.3
TMEM56-RWDD3S4R434 LINC00304-201ENST00000321214 2243 ntTSL 2 BASIC16.91■□□□□ 0.3
TMEM56-RWDD3S4R434 GADD45G-202ENST00000375769 977 ntTSL 2 BASIC16.91■□□□□ 0.3
TMEM56-RWDD3S4R434 SLC26A1-203ENST00000398520 1111 ntTSL 1 (best) BASIC16.91■□□□□ 0.3
TMEM56-RWDD3S4R434 OR2A1-AS1-204ENST00000470435 602 ntBASIC16.91■□□□□ 0.3
TMEM56-RWDD3S4R434 CFD-202ENST00000592860 809 ntAPPRIS ALT2 TSL 1 (best) BASIC16.91■□□□□ 0.3
TMEM56-RWDD3S4R434 GPAA1-201ENST00000355091 2078 ntAPPRIS P1 TSL 1 (best) BASIC16.91■□□□□ 0.3
TMEM56-RWDD3S4R434 LRCH4-211ENST00000619071 2098 ntTSL 5 BASIC16.91■□□□□ 0.3
TMEM56-RWDD3S4R434 TRIM4-202ENST00000354241 1942 ntTSL 1 (best) BASIC16.91■□□□□ 0.3
TMEM56-RWDD3S4R434 ST3GAL4-217ENST00000534083 1919 ntAPPRIS ALT1 TSL 5 BASIC16.91■□□□□ 0.3
TMEM56-RWDD3S4R434 SLC25A22-216ENST00000531214 1790 ntAPPRIS P1 TSL 2 BASIC16.91■□□□□ 0.3
TMEM56-RWDD3S4R434 PLBD1-201ENST00000240617 2426 ntAPPRIS P1 TSL 1 (best) BASIC16.91■□□□□ 0.3
TMEM56-RWDD3S4R434 HOXC13-201ENST00000243056 2423 ntAPPRIS P1 TSL 1 (best) BASIC16.91■□□□□ 0.3
TMEM56-RWDD3S4R434 NEIL3-201ENST00000264596 2408 ntAPPRIS P1 TSL 1 (best) BASIC16.91■□□□□ 0.3
TMEM56-RWDD3S4R434 FAM217A-201ENST00000274673 2265 ntAPPRIS P1 TSL 1 (best) BASIC16.91■□□□□ 0.3
TMEM56-RWDD3S4R434 SOCS2-201ENST00000340600 2761 ntAPPRIS P1 TSL 1 (best) BASIC16.91■□□□□ 0.3
TMEM56-RWDD3S4R434 CCDC34-202ENST00000328697 2103 ntAPPRIS ALT2 TSL 1 (best) BASIC16.91■□□□□ 0.3
TMEM56-RWDD3S4R434 DISC1-202ENST00000317586 2636 ntAPPRIS ALT2 TSL 1 (best) BASIC16.91■□□□□ 0.3
TMEM56-RWDD3S4R434 AC009041.2-204ENST00000568394 3343 ntTSL 1 (best) BASIC16.91■□□□□ 0.3
TMEM56-RWDD3S4R434 AQP11-201ENST00000313578 2152 ntAPPRIS P1 TSL 1 (best) BASIC16.91■□□□□ 0.3
TMEM56-RWDD3S4R434 SEC11A-201ENST00000268220 1656 ntAPPRIS P1 TSL 1 (best) BASIC16.91■□□□□ 0.3
TMEM56-RWDD3S4R434 PDLIM3-212ENST00000620787 2352 ntTSL 4 BASIC16.91■□□□□ 0.3
TMEM56-RWDD3S4R434 KREMEN2-202ENST00000319500 1882 ntAPPRIS ALT2 TSL 1 (best) BASIC16.9■□□□□ 0.3
TMEM56-RWDD3S4R434 KMT5B-201ENST00000304363 5837 ntAPPRIS P1 TSL 5 BASIC16.9■□□□□ 0.3
TMEM56-RWDD3S4R434 CKMT1B-207ENST00000441322 1747 ntAPPRIS P1 TSL 1 (best) BASIC16.9■□□□□ 0.3
TMEM56-RWDD3S4R434 RGMB-207ENST00000513185 2052 ntAPPRIS ALT2 TSL 2 BASIC16.9■□□□□ 0.3
TMEM56-RWDD3S4R434 PCSK6-214ENST00000611716 4409 ntAPPRIS P4 TSL 1 (best) BASIC16.9■□□□□ 0.3
TMEM56-RWDD3S4R434 SNX3-202ENST00000349379 890 ntTSL 2 BASIC16.9■□□□□ 0.3
TMEM56-RWDD3S4R434 SURF2-201ENST00000371964 842 ntAPPRIS P1 TSL 1 (best) BASIC16.9■□□□□ 0.3
TMEM56-RWDD3S4R434 ANKRD63-201ENST00000434396 1143 ntAPPRIS P1 BASIC16.9■□□□□ 0.3
TMEM56-RWDD3S4R434 SAP25-203ENST00000614631 987 ntAPPRIS P2 TSL 2 BASIC16.9■□□□□ 0.3
TMEM56-RWDD3S4R434 SHISA9-205ENST00000639941 1135 ntAPPRIS ALT2 TSL 5 BASIC16.9■□□□□ 0.3
TMEM56-RWDD3S4R434 NTN5-201ENST00000270235 1836 ntAPPRIS P1 TSL 1 (best) BASIC16.9■□□□□ 0.3
TMEM56-RWDD3S4R434 IL17RE-206ENST00000454190 2757 ntTSL 2 BASIC16.9■□□□□ 0.3
TMEM56-RWDD3S4R434 EXOC3-AS1-202ENST00000623673 1663 ntBASIC16.9■□□□□ 0.3
TMEM56-RWDD3S4R434 MEF2D-203ENST00000368240 1905 ntTSL 1 (best) BASIC16.9■□□□□ 0.3
TMEM56-RWDD3S4R434 AC055733.4-201ENST00000638462 1354 ntBASIC16.89■□□□□ 0.3
TMEM56-RWDD3S4R434 NSMF-201ENST00000265663 2981 ntAPPRIS P3 TSL 1 (best) BASIC16.89■□□□□ 0.3
Retrieved 100 of 98,524 protein–RNA pairs in 61.4 ms