Protein–RNA interactions for Protein: A0A0B4J262

TRAV8-6, T-cell receptor alpha variable 8-6 (Fragment), humanhuman

Predictions only

Length 113 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
TRAV8-6A0A0B4J262 POMGNT1-201ENST00000371984 2728 ntAPPRIS P1 TSL 1 (best) BASIC15.19■□□□□ 0.02
TRAV8-6A0A0B4J262 TMEM155-201ENST00000337677 2313 ntAPPRIS P2 TSL 1 (best) BASIC15.19■□□□□ 0.02
TRAV8-6A0A0B4J262 DMRT2-203ENST00000358146 1965 ntAPPRIS P1 TSL 1 (best) BASIC15.19■□□□□ 0.02
TRAV8-6A0A0B4J262 IRF7-205ENST00000397574 1968 ntAPPRIS ALT2 TSL 1 (best) BASIC15.19■□□□□ 0.02
TRAV8-6A0A0B4J262 WISP2-203ENST00000372868 1600 ntAPPRIS P1 TSL 3 BASIC15.19■□□□□ 0.02
TRAV8-6A0A0B4J262 RBM42-203ENST00000588161 1609 ntAPPRIS ALT1 TSL 1 (best) BASIC15.19■□□□□ 0.02
TRAV8-6A0A0B4J262 S100A6-201ENST00000368719 665 ntAPPRIS P1 TSL 1 (best) BASIC15.19■□□□□ 0.02
TRAV8-6A0A0B4J262 FAM66C-205ENST00000456135 1216 ntTSL 5 BASIC15.19■□□□□ 0.02
TRAV8-6A0A0B4J262 FBXO24-202ENST00000427939 2087 ntTSL 2 BASIC15.19■□□□□ 0.02
TRAV8-6A0A0B4J262 ADGRD2-201ENST00000334810 3244 ntAPPRIS P1 TSL 5 BASIC15.19■□□□□ 0.02
TRAV8-6A0A0B4J262 AC087742.1-201ENST00000575880 1738 ntBASIC15.19■□□□□ 0.02
TRAV8-6A0A0B4J262 UTS2R-201ENST00000313135 1357 ntAPPRIS P1 BASIC15.19■□□□□ 0.02
TRAV8-6A0A0B4J262 ECHDC1-203ENST00000368291 1354 ntTSL 2 BASIC15.19■□□□□ 0.02
TRAV8-6A0A0B4J262 OSR1-201ENST00000272223 1936 ntAPPRIS P1 TSL 1 (best) BASIC15.19■□□□□ 0.02
TRAV8-6A0A0B4J262 CEL-201ENST00000372080 2384 ntAPPRIS P1 TSL 5 BASIC15.19■□□□□ 0.02
TRAV8-6A0A0B4J262 CSNK1D-203ENST00000392334 2047 ntAPPRIS ALT1 TSL 1 (best) BASIC15.19■□□□□ 0.02
TRAV8-6A0A0B4J262 RAP1B-204ENST00000393436 2049 ntAPPRIS P1 TSL 1 (best) BASIC15.19■□□□□ 0.02
TRAV8-6A0A0B4J262 CACNA1A-214ENST00000614285 8410 ntAPPRIS ALT2 TSL 5 BASIC15.19■□□□□ 0.02
TRAV8-6A0A0B4J262 PRKAR2A-201ENST00000265563 6471 ntAPPRIS P1 TSL 1 (best) BASIC15.19■□□□□ 0.02
TRAV8-6A0A0B4J262 NABP2-203ENST00000380198 1775 ntAPPRIS P1 TSL 1 (best) BASIC15.19■□□□□ 0.02
TRAV8-6A0A0B4J262 PLEKHG5-201ENST00000340850 4715 ntAPPRIS P3 TSL 5 BASIC15.18■□□□□ 0.02
TRAV8-6A0A0B4J262 PLEKHG5-211ENST00000535355 4725 ntAPPRIS ALT2 TSL 2 BASIC15.18■□□□□ 0.02
TRAV8-6A0A0B4J262 ZPBP2-201ENST00000348931 1543 ntAPPRIS P4 TSL 1 (best) BASIC15.18■□□□□ 0.02
TRAV8-6A0A0B4J262 AC133637.1-201ENST00000624115 1537 ntBASIC15.18■□□□□ 0.02
TRAV8-6A0A0B4J262 CNTNAP3B-212ENST00000617422 2170 ntTSL 2 BASIC15.18■□□□□ 0.02
TRAV8-6A0A0B4J262 RNASEH2B-201ENST00000336617 1629 ntAPPRIS P1 TSL 1 (best) BASIC15.18■□□□□ 0.02
TRAV8-6A0A0B4J262 ARHGEF28-204ENST00000437974 5792 ntAPPRIS P3 TSL 1 (best) BASIC15.18■□□□□ 0.02
TRAV8-6A0A0B4J262 UBN1-201ENST00000262376 6252 ntAPPRIS P1 TSL 1 (best) BASIC15.18■□□□□ 0.02
TRAV8-6A0A0B4J262 PYCARD-201ENST00000247470 990 ntAPPRIS P1 TSL 1 (best) BASIC15.18■□□□□ 0.02
TRAV8-6A0A0B4J262 RGS20-202ENST00000297313 2104 ntTSL 1 (best) BASIC15.18■□□□□ 0.02
TRAV8-6A0A0B4J262 PTCHD3P2-201ENST00000424937 1205 ntBASIC15.18■□□□□ 0.02
TRAV8-6A0A0B4J262 AC006455.2-201ENST00000429931 906 ntBASIC15.18■□□□□ 0.02
TRAV8-6A0A0B4J262 PEMT-206ENST00000435340 960 ntTSL 5 BASIC15.18■□□□□ 0.02
TRAV8-6A0A0B4J262 AC007009.1-201ENST00000458624 429 ntTSL 2 BASIC15.18■□□□□ 0.02
TRAV8-6A0A0B4J262 SMIM29-205ENST00000468145 903 ntTSL 2 BASIC15.18■□□□□ 0.02
TRAV8-6A0A0B4J262 SMIM29-207ENST00000481533 1053 ntAPPRIS P1 TSL 1 (best) BASIC15.18■□□□□ 0.02
TRAV8-6A0A0B4J262 TOLLIP-208ENST00000527938 549 ntTSL 4 BASIC15.18■□□□□ 0.02
TRAV8-6A0A0B4J262 ZNF264-206ENST00000600531 774 ntTSL 2 BASIC15.18■□□□□ 0.02
TRAV8-6A0A0B4J262 FAM129C-201ENST00000332386 2222 ntAPPRIS ALT2 TSL 1 (best) BASIC15.18■□□□□ 0.02
TRAV8-6A0A0B4J262 B3GALT4-204ENST00000451237 1694 ntAPPRIS P1 BASIC15.18■□□□□ 0.02
TRAV8-6A0A0B4J262 COL16A1-203ENST00000373672 5736 ntAPPRIS P1 TSL 5 BASIC15.18■□□□□ 0.02
TRAV8-6A0A0B4J262 SEPT2-203ENST00000391971 3315 ntAPPRIS P1 TSL 1 (best) BASIC15.18■□□□□ 0.02
TRAV8-6A0A0B4J262 ASPM-201ENST00000294732 6132 ntTSL 1 (best) BASIC15.18■□□□□ 0.02
TRAV8-6A0A0B4J262 KLRG2-201ENST00000340940 2197 ntAPPRIS P1 TSL 1 (best) BASIC15.18■□□□□ 0.02
TRAV8-6A0A0B4J262 CHST11-201ENST00000303694 5709 ntAPPRIS P3 TSL 1 (best) BASIC15.18■□□□□ 0.02
TRAV8-6A0A0B4J262 H1FX-201ENST00000333762 1507 ntAPPRIS P1 BASIC15.17■□□□□ 0.02
TRAV8-6A0A0B4J262 ANKRD44-204ENST00000409919 1622 ntTSL 1 (best) BASIC15.17■□□□□ 0.02
TRAV8-6A0A0B4J262 AC004687.1-201ENST00000579003 1625 ntBASIC15.17■□□□□ 0.02
TRAV8-6A0A0B4J262 SLC35A2-210ENST00000616181 1614 ntTSL 2 BASIC15.17■□□□□ 0.02
TRAV8-6A0A0B4J262 DOK3-202ENST00000357198 1729 ntTSL 2 BASIC15.17■□□□□ 0.02
TRAV8-6A0A0B4J262 SCAND1-202ENST00000373991 1727 ntAPPRIS P1 TSL 1 (best) BASIC15.17■□□□□ 0.02
TRAV8-6A0A0B4J262 PLCH2-205ENST00000449969 5450 ntTSL 5 BASIC15.17■□□□□ 0.02
TRAV8-6A0A0B4J262 SETD6-202ENST00000310682 2042 ntAPPRIS P3 TSL 2 BASIC15.17■□□□□ 0.02
TRAV8-6A0A0B4J262 SLC13A3-204ENST00000413164 2008 ntTSL 2 BASIC15.17■□□□□ 0.02
TRAV8-6A0A0B4J262 FAM118B-209ENST00000533050 2402 ntAPPRIS P3 TSL 1 (best) BASIC15.17■□□□□ 0.02
TRAV8-6A0A0B4J262 FSTL3-201ENST00000166139 2542 ntAPPRIS P1 TSL 1 (best) BASIC15.17■□□□□ 0.02
TRAV8-6A0A0B4J262 TTC19-201ENST00000261647 3002 ntAPPRIS P2 TSL 1 (best) BASIC15.17■□□□□ 0.02
TRAV8-6A0A0B4J262 NOMO1-201ENST00000287667 4355 ntAPPRIS P2 TSL 1 (best) BASIC15.17■□□□□ 0.02
TRAV8-6A0A0B4J262 ITGB5-201ENST00000296181 4372 ntAPPRIS P1 TSL 1 (best) BASIC15.17■□□□□ 0.02
TRAV8-6A0A0B4J262 KLC1-208ENST00000452929 2453 ntTSL 5 BASIC15.17■□□□□ 0.02
TRAV8-6A0A0B4J262 ASCL4-201ENST00000342331 2260 ntAPPRIS P1 BASIC15.17■□□□□ 0.02
TRAV8-6A0A0B4J262 AC008073.3-201ENST00000610442 2281 ntAPPRIS P1 TSL 2 BASIC15.17■□□□□ 0.02
TRAV8-6A0A0B4J262 CBWD5-207ENST00000382405 1791 ntAPPRIS P1 TSL 1 (best) BASIC15.17■□□□□ 0.02
TRAV8-6A0A0B4J262 DNPH1-201ENST00000230431 657 ntAPPRIS P1 TSL 1 (best) BASIC15.17■□□□□ 0.02
TRAV8-6A0A0B4J262 C11orf91-201ENST00000379011 811 ntAPPRIS P1 TSL 1 (best) BASIC15.17■□□□□ 0.02
TRAV8-6A0A0B4J262 HES6-206ENST00000409574 738 ntTSL 2 BASIC15.17■□□□□ 0.02
TRAV8-6A0A0B4J262 VAMP2-204ENST00000488857 874 ntAPPRIS ALT1 TSL 3 BASIC15.17■□□□□ 0.02
TRAV8-6A0A0B4J262 MIR3181-201ENST00000578512 73 ntBASIC15.17■□□□□ 0.02
TRAV8-6A0A0B4J262 SHISA9-205ENST00000639941 1135 ntAPPRIS ALT2 TSL 5 BASIC15.17■□□□□ 0.02
TRAV8-6A0A0B4J262 DAG1-219ENST00000538711 5582 ntAPPRIS P1 TSL 5 BASIC15.17■□□□□ 0.02
TRAV8-6A0A0B4J262 POMT2-201ENST00000261534 4876 ntAPPRIS P1 TSL 1 (best) BASIC15.17■□□□□ 0.02
TRAV8-6A0A0B4J262 RHOU-201ENST00000366691 4372 ntAPPRIS P1 TSL 1 (best) BASIC15.17■□□□□ 0.02
TRAV8-6A0A0B4J262 WDTC1-201ENST00000319394 4819 ntAPPRIS ALT1 TSL 1 (best) BASIC15.17■□□□□ 0.02
TRAV8-6A0A0B4J262 DYNC1LI2-201ENST00000258198 4515 ntAPPRIS P1 TSL 1 (best) BASIC15.17■□□□□ 0.02
TRAV8-6A0A0B4J262 TRA2A-201ENST00000297071 1845 ntAPPRIS P3 TSL 1 (best) BASIC15.17■□□□□ 0.02
TRAV8-6A0A0B4J262 JAG1-201ENST00000254958 6048 ntAPPRIS P1 TSL 1 (best) BASIC15.17■□□□□ 0.02
TRAV8-6A0A0B4J262 PLPPR2-208ENST00000591608 2552 ntAPPRIS ALT2 TSL 2 BASIC15.17■□□□□ 0.02
TRAV8-6A0A0B4J262 CACNA1A-215ENST00000635727 7536 ntAPPRIS ALT2 TSL 5 BASIC15.17■□□□□ 0.02
TRAV8-6A0A0B4J262 NR2F1-AS1-210ENST00000606739 1431 ntTSL 2 BASIC15.17■□□□□ 0.02
TRAV8-6A0A0B4J262 CLYBL-203ENST00000376355 6771 ntAPPRIS P1 TSL 2 BASIC15.16■□□□□ 0.02
TRAV8-6A0A0B4J262 PLPP1-201ENST00000264775 1550 ntAPPRIS P4 TSL 1 (best) BASIC15.16■□□□□ 0.02
TRAV8-6A0A0B4J262 SDC3-202ENST00000339394 1580 ntAPPRIS P1 TSL 1 (best) BASIC15.16■□□□□ 0.02
TRAV8-6A0A0B4J262 FNBP1-202ENST00000420781 5410 ntAPPRIS ALT1 TSL 1 (best) BASIC15.16■□□□□ 0.02
TRAV8-6A0A0B4J262 CENPH-201ENST00000283006 1389 ntAPPRIS P1 TSL 1 (best) BASIC15.16■□□□□ 0.02
TRAV8-6A0A0B4J262 GAS6-201ENST00000327773 2490 ntAPPRIS P1 TSL 1 (best) BASIC15.16■□□□□ 0.02
TRAV8-6A0A0B4J262 UBR3-203ENST00000418381 7951 ntAPPRIS P1 TSL 5 BASIC15.16■□□□□ 0.02
TRAV8-6A0A0B4J262 GLT8D2-205ENST00000548660 1835 ntAPPRIS P1 TSL 2 BASIC15.16■□□□□ 0.02
TRAV8-6A0A0B4J262 OIP5-AS1-208ENST00000560706 473 ntTSL 5 BASIC15.16■□□□□ 0.02
TRAV8-6A0A0B4J262 NKIRAS2-204ENST00000393880 1644 ntAPPRIS P1 TSL 2 BASIC15.16■□□□□ 0.02
TRAV8-6A0A0B4J262 METTL1-202ENST00000324871 2066 ntAPPRIS P1 TSL 1 (best) BASIC15.16■□□□□ 0.02
TRAV8-6A0A0B4J262 TANGO2-210ENST00000432883 2084 ntTSL 2 BASIC15.16■□□□□ 0.02
TRAV8-6A0A0B4J262 ARHGEF28-203ENST00000426542 6118 ntAPPRIS ALT2 TSL 1 (best) BASIC15.16■□□□□ 0.02
TRAV8-6A0A0B4J262 LEMD2-214ENST00000614475 2883 ntAPPRIS P1 TSL 5 BASIC15.16■□□□□ 0.02
TRAV8-6A0A0B4J262 AFG3L1P-217ENST00000557444 2447 ntBASIC15.16■□□□□ 0.02
TRAV8-6A0A0B4J262 ZNF281-202ENST00000367352 2933 ntAPPRIS ALT2 TSL 2 BASIC15.16■□□□□ 0.02
TRAV8-6A0A0B4J262 CCDC166-201ENST00000542437 1320 ntAPPRIS P1 TSL 2 BASIC15.16■□□□□ 0.02
TRAV8-6A0A0B4J262 COL13A1-205ENST00000398978 3093 ntAPPRIS P4 TSL 5 BASIC15.15■□□□□ 0.02
TRAV8-6A0A0B4J262 MGAT4B-201ENST00000292591 2446 ntAPPRIS P1 TSL 1 (best) BASIC15.15■□□□□ 0.02
TRAV8-6A0A0B4J262 CASP9-203ENST00000375890 1351 ntTSL 2 BASIC15.15■□□□□ 0.02
TRAV8-6A0A0B4J262 WAC-202ENST00000347934 2839 ntTSL 5 BASIC15.15■□□□□ 0.02
Retrieved 100 of 98,524 protein–RNA pairs in 29.1 ms