RNA–Protein interactions for RNA: ENST00000373672.7

COL16A1-203, Transcript of collagen type XVI alpha 1 chain, humanhuman

APPRIS P1 TSL 5 BASIC

Gene COL16A1, Length 5,736 nt, Biotype protein coding.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
COL16A1-203ENST00000373672 DCAF8L2P0C7V8 631 aa30.88■■■□□ 2.53
COL16A1-203ENST00000373672 SUPT5HO00267 1087 aaKnown RBP29.44■■■□□ 2.3
COL16A1-203ENST00000373672 NISCHQ9Y2I1 1504 aa29.08■■■□□ 2.25
COL16A1-203ENST00000373672 SHROOM4Q9ULL8 1493 aa28.8■■■□□ 2.2
COL16A1-203ENST00000373672 PELP1Q8IZL8 1130 aaKnown RBP28.66■■■□□ 2.18
COL16A1-203ENST00000373672 EHMT2Q96KQ7 1210 aa28.56■■■□□ 2.16
COL16A1-203ENST00000373672 APLP2Q06481 763 aa28.3■■■□□ 2.12
COL16A1-203ENST00000373672 FAM9AQ8IZU1 332 aaPredicted RBP27.81■■■□□ 2.04
COL16A1-203ENST00000373672 PCGF6Q9BYE7 350 aa27.67■■■□□ 2.02
COL16A1-203ENST00000373672 TTBK1Q5TCY1 1321 aaPredicted RBP27.66■■■□□ 2.02
COL16A1-203ENST00000373672 CENPBP07199 599 aaPredicted RBP27.51■■□□□ 1.99
COL16A1-203ENST00000373672 ZEB1P37275 1124 aaPredicted RBP27.49■■□□□ 1.99
COL16A1-203ENST00000373672 ERICH6Q7L0X2 663 aa27.43■■□□□ 1.98
COL16A1-203ENST00000373672 CCER1Q8TC90 406 aaPredicted RBP27.37■■□□□ 1.97
COL16A1-203ENST00000373672 RANGAP1P46060 587 aaPredicted RBP27.31■■□□□ 1.96
COL16A1-203ENST00000373672 TRIM41Q8WV44 630 aa27.31■■□□□ 1.96
COL16A1-203ENST00000373672 ATP1B4Q9UN42 357 aaPredicted RBP27.15■■□□□ 1.94
COL16A1-203ENST00000373672 UBTFP17480 764 aaKnown RBP27.04■■□□□ 1.92
COL16A1-203ENST00000373672 NEFLP07196 543 aa26.97■■□□□ 1.91
COL16A1-203ENST00000373672 YTHDC1Q96MU7 727 aaKnown RBP26.79■■□□□ 1.88
COL16A1-203ENST00000373672 MYT1Q01538 1121 aa26.68■■□□□ 1.86
COL16A1-203ENST00000373672 TRIM26Q12899 539 aaPredicted RBP26.53■■□□□ 1.84
COL16A1-203ENST00000373672 PPARGC1BQ86YN6 1023 aaKnown RBP26.51■■□□□ 1.83
COL16A1-203ENST00000373672 DAXXQ9UER7 740 aaPredicted RBP26.25■■□□□ 1.79
COL16A1-203ENST00000373672 HRCP23327 699 aa26.22■■□□□ 1.79
COL16A1-203ENST00000373672 ITGAEP38570 1179 aa26.22■■□□□ 1.79
COL16A1-203ENST00000373672 POLR3GLQ9BT43 218 aa26.16■■□□□ 1.78
COL16A1-203ENST00000373672 HNRNPUL2-BSCL2H3BQZ7 746 aaPredicted RBP26.16■■□□□ 1.78
COL16A1-203ENST00000373672 HNRNPUL2Q1KMD3 747 aaKnown RBP26.16■■□□□ 1.78
COL16A1-203ENST00000373672 MYT1LQ9UL68 1186 aa26.15■■□□□ 1.78
COL16A1-203ENST00000373672 LOC105371045A0A1W2PR82 267 aa25.99■■□□□ 1.75
COL16A1-203ENST00000373672 CHIC1Q5VXU3 224 aa25.95■■□□□ 1.74
COL16A1-203ENST00000373672 CNGB1Q14028 1251 aaPredicted RBP25.83■■□□□ 1.72
COL16A1-203ENST00000373672 SLC4A1APQ9BWU0 796 aaKnown RBP25.69■■□□□ 1.7
COL16A1-203ENST00000373672 DIEXFQ68CQ4 756 aaKnown RBP25.68■■□□□ 1.7
COL16A1-203ENST00000373672 ZNF316A6NFI3 1004 aaPredicted RBP25.64■■□□□ 1.69
COL16A1-203ENST00000373672 RTL5Q5HYW3 569 aaPredicted RBP25.63■■□□□ 1.69
COL16A1-203ENST00000373672 CLSPNQ9HAW4 1339 aa25.59■■□□□ 1.69
COL16A1-203ENST00000373672 FAM50AQ14320 339 aaKnown RBP25.57■■□□□ 1.68
COL16A1-203ENST00000373672 TRIM52Q96A61 297 aa25.48■■□□□ 1.67
COL16A1-203ENST00000373672 NEUROD1Q13562 356 aa25.37■■□□□ 1.65
COL16A1-203ENST00000373672 ANP32CO43423 234 aa25.28■■□□□ 1.64
COL16A1-203ENST00000373672 BCANQ96GW7 911 aa25.21■■□□□ 1.63
COL16A1-203ENST00000373672 ZNF326Q5BKZ1 582 aaKnown RBP25.17■■□□□ 1.62
COL16A1-203ENST00000373672 CDK11AQ9UQ88 783 aaPredicted RBP25.17■■□□□ 1.62
COL16A1-203ENST00000373672 GTF3C3Q9Y5Q9 886 aa25.16■■□□□ 1.62
COL16A1-203ENST00000373672 PABPN1Q86U42 306 aaKnown RBP eCLIP25.14■■□□□ 1.612e-6■■■■□ 24.6
COL16A1-203ENST00000373672 ZBTB47Q9UFB7 747 aaPredicted RBP25.14■■□□□ 1.61
COL16A1-203ENST00000373672 ABCC9O60706 1549 aa25.07■■□□□ 1.6
COL16A1-203ENST00000373672 CANXP27824 592 aaKnown RBP24.99■■□□□ 1.59
COL16A1-203ENST00000373672 FBLN2P98095 1184 aa24.91■■□□□ 1.58
COL16A1-203ENST00000373672 NEFMP07197 916 aa24.89■■□□□ 1.57
COL16A1-203ENST00000373672 SLC24A1O60721 1099 aa24.81■■□□□ 1.56
COL16A1-203ENST00000373672 ACIN1Q9UKV3 1341 aaKnown RBP24.78■■□□□ 1.56
COL16A1-203ENST00000373672 ANP32AP39687 249 aaKnown RBP24.78■■□□□ 1.56
COL16A1-203ENST00000373672 CSRNP3Q8WYN3 585 aa24.78■■□□□ 1.56
COL16A1-203ENST00000373672 P3H3Q8IVL6 736 aa24.77■■□□□ 1.56
COL16A1-203ENST00000373672 BCL11AQ9H165 835 aa24.74■■□□□ 1.55
COL16A1-203ENST00000373672 ARID3CA6NKF2 412 aa24.7■■□□□ 1.54
COL16A1-203ENST00000373672 ZNF777Q9ULD5 760 aaPredicted RBP24.66■■□□□ 1.54
COL16A1-203ENST00000373672 NPM2Q86SE8 214 aaKnown RBP24.59■■□□□ 1.53
COL16A1-203ENST00000373672 TONSLQ96HA7 1378 aa24.56■■□□□ 1.52
COL16A1-203ENST00000373672 FKBP8Q14318 412 aa24.49■■□□□ 1.51
COL16A1-203ENST00000373672 ANP32BQ92688 251 aaKnown RBP24.45■■□□□ 1.5
COL16A1-203ENST00000373672 HNRNPUQ00839 825 aaKnown RBP eCLIP24.42■■□□□ 1.5
COL16A1-203ENST00000373672 UPF2Q9HAU5 1272 aaKnown RBP24.41■■□□□ 1.5
COL16A1-203ENST00000373672 ESF1Q9H501 851 aaKnown RBP24.41■■□□□ 1.5
COL16A1-203ENST00000373672 HSP90AA1P07900 732 aaKnown RBP24.4■■□□□ 1.5
COL16A1-203ENST00000373672 DCAF1Q9Y4B6 1507 aa24.36■■□□□ 1.49
COL16A1-203ENST00000373672 CHGAP10645 457 aaKnown RBP24.36■■□□□ 1.49
COL16A1-203ENST00000373672 FAM9BQ8IZU0 186 aa24.35■■□□□ 1.49
COL16A1-203ENST00000373672 STAG3Q9UJ98 1225 aa24.34■■□□□ 1.49
COL16A1-203ENST00000373672 DDX10Q13206 875 aaKnown RBP24.33■■□□□ 1.49
COL16A1-203ENST00000373672 SCRIBQ14160 1630 aa24.28■■□□□ 1.48
COL16A1-203ENST00000373672 GOLGA6L2Q8N9W4 650 aaPredicted RBP24.25■■□□□ 1.47
COL16A1-203ENST00000373672 TMC1Q8TDI8 760 aa24.23■■□□□ 1.47
COL16A1-203ENST00000373672 CCDC136Q96JN2 1154 aa24.21■■□□□ 1.47
COL16A1-203ENST00000373672 SALL2Q9Y467 1007 aaPredicted RBP24.19■■□□□ 1.46
COL16A1-203ENST00000373672 EIF5BO60841 1220 aaKnown RBP24.19■■□□□ 1.46
COL16A1-203ENST00000373672 WDR43Q15061 677 aaKnown RBP eCLIP24.17■■□□□ 1.46
COL16A1-203ENST00000373672 CHIC2Q9UKJ5 165 aa24.17■■□□□ 1.46
COL16A1-203ENST00000373672 NPM1P06748 294 aaKnown RBP eCLIP24.17■■□□□ 1.46
COL16A1-203ENST00000373672 GRWD1Q9BQ67 446 aaKnown RBP eCLIP24.13■■□□□ 1.45
COL16A1-203ENST00000373672 MRS2Q9HD23 443 aa24.11■■□□□ 1.45
COL16A1-203ENST00000373672 TSPY4P0CV99 314 aa24.06■■□□□ 1.44
COL16A1-203ENST00000373672 TSPY10P0CW01 314 aa24.06■■□□□ 1.44
COL16A1-203ENST00000373672 ZCCHC6Q5VYS8 1495 aaKnown RBP24.05■■□□□ 1.44
COL16A1-203ENST00000373672 MTUS2Q5JR59 1369 aa24.05■■□□□ 1.44
COL16A1-203ENST00000373672 KDM2AQ9Y2K7 1162 aa24.02■■□□□ 1.44
COL16A1-203ENST00000373672 PLPPR3Q6T4P5 718 aa24.02■■□□□ 1.44
COL16A1-203ENST00000373672 NBR1Q14596 966 aa24.02■■□□□ 1.44
COL16A1-203ENST00000373672 GLIPR1L2Q4G1C9 344 aa23.99■■□□□ 1.43
COL16A1-203ENST00000373672 MYH16Q9H6N6 1097 aa23.96■■□□□ 1.43
COL16A1-203ENST00000373672 CLIP1P30622 1438 aa23.94■■□□□ 1.42
COL16A1-203ENST00000373672 EIF4G2P78344 907 aaKnown RBP eCLIP23.93■■□□□ 1.42
COL16A1-203ENST00000373672 MIER1Q8N108 512 aa23.93■■□□□ 1.42
COL16A1-203ENST00000373672 IRX6P78412 446 aaPredicted RBP23.88■■□□□ 1.41
COL16A1-203ENST00000373672 ARXQ96QS3 562 aa23.88■■□□□ 1.41
COL16A1-203ENST00000373672 DDRGK1Q96HY6 314 aa23.84■■□□□ 1.41
COL16A1-203ENST00000373672 HIRIP3Q9BW71 556 aaPredicted RBP23.83■■□□□ 1.41
Retrieved 100 of 20,778 RNA–protein pairs in 12.5 ms