Protein–RNA interactions for Protein: O75841

UPK1B, Uroplakin-1b, humanhuman

Predictions only

Length 260 aa.

Download Table  
Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
UPK1BO75841 PGS1-201ENST00000262764 2201 ntAPPRIS P1 TSL 1 (best) BASIC18.17■□□□□ 0.5
UPK1BO75841 ASB1-202ENST00000409297 878 ntTSL 5 BASIC18.17■□□□□ 0.5
UPK1BO75841 TSPY4-202ENST00000426950 1179 ntAPPRIS P5 TSL 5 BASIC18.17■□□□□ 0.5
UPK1BO75841 FP236240.1-201ENST00000619537 1116 ntAPPRIS P1 TSL 1 (best) BASIC18.17■□□□□ 0.5
UPK1BO75841 APAF1-210ENST00000551964 5444 ntAPPRIS P4 TSL 1 (best) BASIC18.17■□□□□ 0.5
UPK1BO75841 PACSIN2-203ENST00000402229 1883 ntAPPRIS P1 TSL 5 BASIC18.17■□□□□ 0.5
UPK1BO75841 LRCH4-211ENST00000619071 2098 ntTSL 5 BASIC18.17■□□□□ 0.5
UPK1BO75841 NGLY1-207ENST00000428257 2534 ntTSL 1 (best) BASIC18.17■□□□□ 0.5
UPK1BO75841 CSK-201ENST00000220003 2767 ntAPPRIS P1 TSL 1 (best) BASIC18.17■□□□□ 0.5
UPK1BO75841 RCAN3-205ENST00000436717 2574 ntTSL 3 BASIC18.17■□□□□ 0.5
UPK1BO75841 FAM189B-204ENST00000368368 2609 ntTSL 1 (best) BASIC18.17■□□□□ 0.5
UPK1BO75841 CAMKK2-208ENST00000412367 2006 ntAPPRIS ALT2 TSL 1 (best) BASIC18.16■□□□□ 0.5
UPK1BO75841 MIB2-231ENST00000518681 3116 ntTSL 1 (best) BASIC18.16■□□□□ 0.5
UPK1BO75841 BMP1-202ENST00000306385 4229 ntAPPRIS P1 TSL 1 (best) BASIC18.16■□□□□ 0.5
UPK1BO75841 PPP4C-201ENST00000279387 1407 ntAPPRIS P1 TSL 1 (best) BASIC18.16■□□□□ 0.5
UPK1BO75841 CEP78-201ENST00000277082 2542 ntAPPRIS ALT2 TSL 2 BASIC18.16■□□□□ 0.5
UPK1BO75841 C16orf59-201ENST00000361837 1662 ntAPPRIS P2 TSL 1 (best) BASIC18.16■□□□□ 0.5
UPK1BO75841 CYTH1-209ENST00000589296 2159 ntTSL 5 BASIC18.16■□□□□ 0.5
UPK1BO75841 KCNK17-202ENST00000453413 1706 ntAPPRIS ALT2 TSL 5 BASIC18.16■□□□□ 0.5
UPK1BO75841 CIDEB-202ENST00000336557 2409 ntAPPRIS P1 TSL 2 BASIC18.16■□□□□ 0.5
UPK1BO75841 STX17-212ENST00000534052 2424 ntAPPRIS P1 TSL 1 (best) BASIC18.16■□□□□ 0.5
UPK1BO75841 ARHGDIG-201ENST00000219409 949 ntAPPRIS P1 TSL 1 (best) BASIC18.16■□□□□ 0.5
UPK1BO75841 CARNMT1-201ENST00000376830 1012 ntTSL 1 (best) BASIC18.16■□□□□ 0.5
UPK1BO75841 AC009041.3-201ENST00000564390 879 ntTSL 5 BASIC18.16■□□□□ 0.5
UPK1BO75841 R3HDM4-208ENST00000626716 138 ntTSL 5 BASIC18.16■□□□□ 0.5
UPK1BO75841 ATP6V0A2-201ENST00000330342 6542 ntAPPRIS P1 TSL 1 (best) BASIC18.16■□□□□ 0.5
UPK1BO75841 ASMTL-206ENST00000534940 2048 ntTSL 2 BASIC18.16■□□□□ 0.5
UPK1BO75841 GPAA1-202ENST00000361036 1840 ntTSL 1 (best) BASIC18.16■□□□□ 0.5
UPK1BO75841 RNASEH2B-201ENST00000336617 1629 ntAPPRIS P1 TSL 1 (best) BASIC18.16■□□□□ 0.5
UPK1BO75841 GRB10-205ENST00000401949 2627 ntAPPRIS P1 TSL 1 (best) BASIC18.16■□□□□ 0.5
UPK1BO75841 FIP1L1-203ENST00000358575 2180 ntAPPRIS P4 TSL 2 BASIC18.15■□□□□ 0.5
UPK1BO75841 MAIP1-201ENST00000295079 1495 ntAPPRIS P2 TSL 2 BASIC18.15■□□□□ 0.5
UPK1BO75841 GATA4-207ENST00000532059 1459 ntAPPRIS ALT1 TSL 1 (best) BASIC18.15■□□□□ 0.5
UPK1BO75841 AC005332.7-201ENST00000614046 2005 ntBASIC18.15■□□□□ 0.5
UPK1BO75841 MARK1-205ENST00000611084 5321 ntAPPRIS ALT1 TSL 1 (best) BASIC18.15■□□□□ 0.5
UPK1BO75841 DBNDD1-201ENST00000002501 2079 ntAPPRIS P1 TSL 2 BASIC18.15■□□□□ 0.5
UPK1BO75841 HIPK1-207ENST00000369561 3777 ntTSL 5 BASIC18.15■□□□□ 0.5
UPK1BO75841 PTPA-210ENST00000414510 1153 ntTSL 1 (best) BASIC18.15■□□□□ 0.5
UPK1BO75841 CAPNS1-211ENST00000590874 926 ntTSL 5 BASIC18.15■□□□□ 0.5
UPK1BO75841 C22orf34-203ENST00000405854 1593 ntTSL 5 BASIC18.15■□□□□ 0.5
UPK1BO75841 PPP2R5A-201ENST00000261461 3128 ntAPPRIS P1 TSL 1 (best) BASIC18.15■□□□□ 0.5
UPK1BO75841 TAL1-202ENST00000371884 4642 ntAPPRIS P1 TSL 1 (best) BASIC18.15■□□□□ 0.5
UPK1BO75841 DTX3-201ENST00000337737 2029 ntAPPRIS P3 TSL 2 BASIC18.15■□□□□ 0.5
UPK1BO75841 HSPBP1-206ENST00000587922 1449 ntAPPRIS P1 TSL 1 (best) BASIC18.15■□□□□ 0.5
UPK1BO75841 IKBKG-214ENST00000618670 2069 ntTSL 1 (best) BASIC18.14■□□□□ 0.5
UPK1BO75841 DBNL-220ENST00000494774 2117 ntAPPRIS P4 TSL 1 (best) BASIC18.14■□□□□ 0.5
UPK1BO75841 COL9A3-201ENST00000343916 2485 ntAPPRIS P1 TSL 1 (best) BASIC18.14■□□□□ 0.5
UPK1BO75841 LPCAT3-201ENST00000261407 2268 ntAPPRIS P1 TSL 1 (best) BASIC18.14■□□□□ 0.49
UPK1BO75841 MXD3-202ENST00000427908 2269 ntTSL 2 BASIC18.14■□□□□ 0.49
UPK1BO75841 ARL6IP4-220ENST00000543566 1591 ntAPPRIS ALT2 TSL 1 (best) BASIC18.14■□□□□ 0.49
UPK1BO75841 SOHLH1-201ENST00000298466 1987 ntAPPRIS P3 TSL 1 (best) BASIC18.14■□□□□ 0.49
UPK1BO75841 BEAN1-202ENST00000536005 1988 ntTSL 1 (best) BASIC18.14■□□□□ 0.49
UPK1BO75841 PCDHB11-202ENST00000624887 1973 ntTSL 2 BASIC18.14■□□□□ 0.49
UPK1BO75841 FAM162B-201ENST00000368557 1036 ntAPPRIS P1 TSL 1 (best) BASIC18.14■□□□□ 0.49
UPK1BO75841 FAM159A-204ENST00000517870 748 ntAPPRIS P1 TSL 1 (best) BASIC18.14■□□□□ 0.49
UPK1BO75841 ZNF706-207ENST00000519882 959 ntAPPRIS P1 TSL 3 BASIC18.14■□□□□ 0.49
UPK1BO75841 ZNF706-213ENST00000521272 732 ntAPPRIS P1 TSL 5 BASIC18.14■□□□□ 0.49
UPK1BO75841 EPHA10-211ENST00000540011 720 ntTSL 5 BASIC18.14■□□□□ 0.49
UPK1BO75841 TRAM1L1-201ENST00000310754 2023 ntAPPRIS P1 BASIC18.14■□□□□ 0.49
UPK1BO75841 NAE1-204ENST00000394074 1654 ntTSL 5 BASIC18.14■□□□□ 0.49
UPK1BO75841 XYLT1-201ENST00000261381 9891 ntAPPRIS P1 TSL 1 (best) BASIC18.14■□□□□ 0.49
UPK1BO75841 DTNBP1-212ENST00000622898 1305 ntTSL 1 (best) BASIC18.14■□□□□ 0.49
UPK1BO75841 AC121338.2-201ENST00000622535 1744 ntBASIC18.14■□□□□ 0.49
UPK1BO75841 ZFP69B-202ENST00000411995 2109 ntAPPRIS P1 TSL 5 BASIC18.14■□□□□ 0.49
UPK1BO75841 CLEC2L-201ENST00000422142 1359 ntAPPRIS P2 TSL 3 BASIC18.14■□□□□ 0.49
UPK1BO75841 SPATA20-226ENST00000619622 2769 ntAPPRIS P2 TSL 5 BASIC18.13■□□□□ 0.49
UPK1BO75841 CBX1-202ENST00000393408 2422 ntAPPRIS P1 TSL 1 (best) BASIC18.13■□□□□ 0.49
UPK1BO75841 PCDH8-202ENST00000377942 5088 ntAPPRIS P4 TSL 1 (best) BASIC18.13■□□□□ 0.49
UPK1BO75841 OGG1-203ENST00000302036 2220 ntTSL 1 (best) BASIC18.13■□□□□ 0.49
UPK1BO75841 TMEM79-203ENST00000405535 2201 ntAPPRIS P1 TSL 1 (best) BASIC18.13■□□□□ 0.49
UPK1BO75841 SENP6-201ENST00000327284 2700 ntTSL 2 BASIC18.13■□□□□ 0.49
UPK1BO75841 KCNS2-201ENST00000287042 5219 ntAPPRIS P1 TSL 1 (best) BASIC18.13■□□□□ 0.49
UPK1BO75841 SGO1-209ENST00000442720 2266 ntAPPRIS ALT2 TSL 1 (best) BASIC18.13■□□□□ 0.49
UPK1BO75841 AVPR2-202ENST00000358927 1763 ntAPPRIS P1 TSL 5 BASIC18.13■□□□□ 0.49
UPK1BO75841 AC079089.2-201ENST00000531211 1277 ntBASIC18.13■□□□□ 0.49
UPK1BO75841 AR-207ENST00000612010 3896 ntTSL 5 BASIC18.13■□□□□ 0.49
UPK1BO75841 PHF11-202ENST00000378319 1359 ntAPPRIS P3 TSL 1 (best) BASIC18.13■□□□□ 0.49
UPK1BO75841 FOXD4-201ENST00000382500 1974 ntAPPRIS P1 BASIC18.13■□□□□ 0.49
UPK1BO75841 NLRP6-201ENST00000312165 2679 ntAPPRIS P3 TSL 1 (best) BASIC18.13■□□□□ 0.49
UPK1BO75841 LRRC27-203ENST00000368613 2113 ntAPPRIS P3 TSL 1 (best) BASIC18.13■□□□□ 0.49
UPK1BO75841 VKORC1L1-202ENST00000434382 1541 ntTSL 2 BASIC18.13■□□□□ 0.49
UPK1BO75841 AF131216.4-201ENST00000638924 1588 ntBASIC18.13■□□□□ 0.49
UPK1BO75841 KAT5-203ENST00000377046 2237 ntAPPRIS P1 TSL 1 (best) BASIC18.13■□□□□ 0.49
UPK1BO75841 SH3RF3-AS1-201ENST00000567491 1604 ntBASIC18.12■□□□□ 0.49
UPK1BO75841 AP004607.7-201ENST00000527152 1677 ntBASIC18.12■□□□□ 0.49
UPK1BO75841 DALRD3-202ENST00000341949 1739 ntAPPRIS P1 TSL 1 (best) BASIC18.12■□□□□ 0.49
UPK1BO75841 FUT4-201ENST00000358752 6059 ntAPPRIS P1 BASIC18.12■□□□□ 0.49
UPK1BO75841 AC093627.4-201ENST00000484550 5008 ntTSL 2 BASIC18.12■□□□□ 0.49
UPK1BO75841 MIB2-203ENST00000378712 2890 ntTSL 2 BASIC18.12■□□□□ 0.49
UPK1BO75841 ARNT-212ENST00000515192 2892 ntTSL 1 (best) BASIC18.12■□□□□ 0.49
UPK1BO75841 RTBDN-207ENST00000589272 2076 ntTSL 2 BASIC18.12■□□□□ 0.49
UPK1BO75841 AC092807.3-205ENST00000467666 531 ntTSL 3 BASIC18.12■□□□□ 0.49
UPK1BO75841 ARL6IP4-211ENST00000454885 1318 ntAPPRIS ALT2 TSL 1 (best) BASIC18.12■□□□□ 0.49
UPK1BO75841 MTSS1L-204ENST00000616026 2241 ntAPPRIS ALT2 TSL 5 BASIC18.12■□□□□ 0.49
UPK1BO75841 PRKAG2-203ENST00000418337 2318 ntTSL 1 (best) BASIC18.12■□□□□ 0.49
UPK1BO75841 PLPBP-201ENST00000328195 2558 ntAPPRIS P1 TSL 1 (best) BASIC18.12■□□□□ 0.49
UPK1BO75841 PLPP1-202ENST00000307259 1597 ntAPPRIS ALT1 TSL 1 (best) BASIC18.12■□□□□ 0.49
UPK1BO75841 CXCL16-203ENST00000574412 1668 ntAPPRIS P2 TSL 1 (best) BASIC18.12■□□□□ 0.49
UPK1BO75841 HNRNPUL1-203ENST00000378215 2864 ntTSL 2 BASIC18.12■□□□□ 0.49
UPK1BO75841 ARNTL2-204ENST00000395901 1954 ntAPPRIS ALT2 TSL 1 (best) BASIC18.11■□□□□ 0.49
Retrieved 100 of 98,524 protein–RNA pairs in 50.1 ms