Protein–RNA interactions for Protein: Q03855

TY1B-DR1, Transposon Ty1-DR1 Gag-Pol polyprotein, yeastyeast

Predictions only

Length 1,755 aa.

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Protein RNA Prediction (catRAPID) Interaction (RIP-Chip)
Gene UniProt Accession Gene Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score Detected Interaction
TY1B-DR1Q03855 POL5YEL055C 3069 nt1.99□□□□□ -2.09
TY1B-DR1Q03855 SPC98YNL126W 2541 nt1.98□□□□□ -2.09
TY1B-DR1Q03855 PET100YDR079W 336 nt1.98□□□□□ -2.09
TY1B-DR1Q03855 YDR169C-AYDR169C-A 150 nt1.98□□□□□ -2.09
TY1B-DR1Q03855 tQ(UUG)E2tQ(UUG)E2 72 nt1.98□□□□□ -2.09
TY1B-DR1Q03855 YLR224WYLR224W 1110 nt1.98□□□□□ -2.09
TY1B-DR1Q03855 CIK1YMR198W 1785 nt1.98□□□□□ -2.09
TY1B-DR1Q03855 GRX3YDR098C 858 nt1.98□□□□□ -2.09
TY1B-DR1Q03855 CTH1YDR151C 978 nt1.98□□□□□ -2.09
TY1B-DR1Q03855 MCM21YDR318W 1107 nt1.98□□□□□ -2.09
TY1B-DR1Q03855 SNO3YFL060C 669 nt1.98□□□□□ -2.09
TY1B-DR1Q03855 SEN15YMR059W 387 nt1.98□□□□□ -2.09
TY1B-DR1Q03855 SNO2YNL334C 669 nt1.98□□□□□ -2.09
TY1B-DR1Q03855 MBA1YBR185C 837 nt1.98□□□□□ -2.09
TY1B-DR1Q03855 SMP3YOR149C 1551 nt1.97□□□□□ -2.09
TY1B-DR1Q03855 VPS38YLR360W 1320 nt1.97□□□□□ -2.09
TY1B-DR1Q03855 SOK1YDR006C 2706 nt1.97□□□□□ -2.09
TY1B-DR1Q03855 UFD2YDL190C 2886 nt1.96□□□□□ -2.1
TY1B-DR1Q03855 YOL166CYOL166C 339 nt1.96□□□□□ -2.1
TY1B-DR1Q03855 YDR034C-DYDR034C-D 5313 nt1.96□□□□□ -2.1
TY1B-DR1Q03855 YLR410W-BYLR410W-B 5313 nt1.96□□□□□ -2.1
TY1B-DR1Q03855 MMS22YLR320W 4365 nt1.96□□□□□ -2.1
TY1B-DR1Q03855 tF(GAA)BtF(GAA)B 73 nt1.95□□□□□ -2.1
TY1B-DR1Q03855 tF(GAA)FtF(GAA)F 73 nt1.95□□□□□ -2.1
TY1B-DR1Q03855 tF(GAA)GtF(GAA)G 73 nt1.95□□□□□ -2.1
TY1B-DR1Q03855 tF(GAA)H1tF(GAA)H1 73 nt1.95□□□□□ -2.1
TY1B-DR1Q03855 tF(GAA)H2tF(GAA)H2 73 nt1.95□□□□□ -2.1
TY1B-DR1Q03855 tF(GAA)MtF(GAA)M 73 nt1.95□□□□□ -2.1
TY1B-DR1Q03855 tF(GAA)P1tF(GAA)P1 73 nt1.95□□□□□ -2.1
TY1B-DR1Q03855 tF(GAA)P2tF(GAA)P2 73 nt1.95□□□□□ -2.1
TY1B-DR1Q03855 RRF1YHR038W 693 nt1.95□□□□□ -2.1
TY1B-DR1Q03855 YHR214C-CYHR214C-C 1437 nt1.95□□□□□ -2.1
TY1B-DR1Q03855 SPH1YLR313C 1593 nt1.95□□□□□ -2.1
TY1B-DR1Q03855 RPS29AYLR388W 171 nt1.95□□□□□ -2.1
TY1B-DR1Q03855 NPL4YBR170C 1743 nt1.95□□□□□ -2.1
TY1B-DR1Q03855 TCM62YBR044C 1719 nt1.95□□□□□ -2.1
TY1B-DR1Q03855 SPP382YLR424W 2127 nt1.95□□□□□ -2.1
TY1B-DR1Q03855 HOP1YIL072W 1818 nt1.95□□□□□ -2.1
TY1B-DR1Q03855 BUR6YER159C 429 nt1.95□□□□□ -2.1
TY1B-DR1Q03855 EAF7YNL136W 1278 nt1.95□□□□□ -2.1
TY1B-DR1Q03855 CRS5YOR031W 210 nt1.95□□□□□ -2.1
TY1B-DR1Q03855 CYC2YOR037W 1101 nt1.95□□□□□ -2.1
TY1B-DR1Q03855 YRR1YOR162C 2433 nt1.94□□□□□ -2.1
TY1B-DR1Q03855 YFL002W-AYFL002W-A 5313 nt1.94□□□□□ -2.1
TY1B-DR1Q03855 YGR161W-BYGR161W-B 5313 nt1.94□□□□□ -2.1
TY1B-DR1Q03855 YCL019WYCL019W 5313 nt1.94□□□□□ -2.1
TY1B-DR1Q03855 YLR035C-AYLR035C-A 3468 nt1.94□□□□□ -2.1
TY1B-DR1Q03855 PRP18YGR006W 756 nt1.94□□□□□ -2.1
TY1B-DR1Q03855 EST3YIL009C-A 546 nt1.94□□□□□ -2.1
TY1B-DR1Q03855 YCK2YNL154C 1641 nt1.94□□□□□ -2.1
TY1B-DR1Q03855 YPK3YBR028C 1578 nt1.94□□□□□ -2.1
TY1B-DR1Q03855 UTP13YLR222C 2454 nt1.94□□□□□ -2.1
TY1B-DR1Q03855 GRX1YCL035C 333 nt1.93□□□□□ -2.1
TY1B-DR1Q03855 PLP1YDR183W 693 nt1.93□□□□□ -2.1
TY1B-DR1Q03855 MRPL9YGR220C 810 nt1.93□□□□□ -2.1
TY1B-DR1Q03855 RMP1YLR145W 606 nt1.93□□□□□ -2.1
TY1B-DR1Q03855 UTP20YBL004W 7482 nt1.92□□□□□ -2.1
TY1B-DR1Q03855 SPS2YDR522C 1509 nt1.92□□□□□ -2.1
TY1B-DR1Q03855 DBP5YOR046C 1449 nt1.92□□□□□ -2.1
TY1B-DR1Q03855 YJR061WYJR061W 2808 nt1.92□□□□□ -2.1
TY1B-DR1Q03855 VPH2YKL119C 648 nt1.92□□□□□ -2.1
TY1B-DR1Q03855 ESF2YNR054C 951 nt1.92□□□□□ -2.1
TY1B-DR1Q03855 RDS2YPL133C 1341 nt1.91□□□□□ -2.1
TY1B-DR1Q03855 YCK3YER123W 1575 nt1.91□□□□□ -2.1
TY1B-DR1Q03855 RIX1YHR197W 2292 nt1.91□□□□□ -2.1
TY1B-DR1Q03855 UBC6YER100W 753 nt1.9□□□□□ -2.1
TY1B-DR1Q03855 YIL156W-AYIL156W-A 402 nt1.9□□□□□ -2.1
TY1B-DR1Q03855 DCG1YIR030C 735 nt1.9□□□□□ -2.1
TY1B-DR1Q03855 MRPL27YBR282W 441 nt1.9□□□□□ -2.1
TY1B-DR1Q03855 SIP4YJL089W 2490 nt1.9□□□□□ -2.11
TY1B-DR1Q03855 YDR179W-AYDR179W-A 1392 nt1.89□□□□□ -2.11
TY1B-DR1Q03855 AFI1YOR129C 2682 nt1.89□□□□□ -2.11
TY1B-DR1Q03855 IRC21YMR073C 606 nt1.89□□□□□ -2.11
TY1B-DR1Q03855 YOR292CYOR292C 930 nt1.88□□□□□ -2.11
TY1B-DR1Q03855 HAL1YPR005C 885 nt1.88□□□□□ -2.11
TY1B-DR1Q03855 UBR1YGR184C 5853 nt1.88□□□□□ -2.11
TY1B-DR1Q03855 FYV8YGR196C 2454 nt1.88□□□□□ -2.11
TY1B-DR1Q03855 PKH3YDR466W 2697 nt1.88□□□□□ -2.11
TY1B-DR1Q03855 VHR1YIL056W 1923 nt1.88□□□□□ -2.11
TY1B-DR1Q03855 YJR003CYJR003C 1560 nt1.88□□□□□ -2.11
TY1B-DR1Q03855 CDC53YDL132W 2448 nt1.88□□□□□ -2.11
TY1B-DR1Q03855 PHO5YBR093C 1404 nt1.88□□□□□ -2.11
TY1B-DR1Q03855 ALE1YOR175C 1860 nt1.88□□□□□ -2.11
TY1B-DR1Q03855 YCR087C-AYCR087C-A 462 nt1.87□□□□□ -2.11
TY1B-DR1Q03855 TRM112YNR046W 408 nt1.87□□□□□ -2.11
TY1B-DR1Q03855 AEP2YMR282C 1743 nt1.87□□□□□ -2.11
TY1B-DR1Q03855 RGP1YDR137W 1992 nt1.87□□□□□ -2.11
TY1B-DR1Q03855 RNA1YMR235C 1224 nt1.87□□□□□ -2.11
TY1B-DR1Q03855 YOR029WYOR029W 336 nt1.87□□□□□ -2.11
TY1B-DR1Q03855 VPS15YBR097W 4365 nt1.87□□□□□ -2.11
TY1B-DR1Q03855 SHE2YKL130C 741 nt1.86□□□□□ -2.11
TY1B-DR1Q03855 CTP1YBR291C 900 nt1.86□□□□□ -2.11
TY1B-DR1Q03855 RPN9YDR427W 1182 nt1.85□□□□□ -2.11
TY1B-DR1Q03855 YER067C-AYER067C-A 324 nt1.85□□□□□ -2.11
TY1B-DR1Q03855 DDI2YFL061W 678 nt1.85□□□□□ -2.11
TY1B-DR1Q03855 RPL33BYOR234C 324 nt1.85□□□□□ -2.11
TY1B-DR1Q03855 OCT1YKL134C 2319 nt1.85□□□□□ -2.11
TY1B-DR1Q03855 MSN5YDR335W 3675 nt1.85□□□□□ -2.11
TY1B-DR1Q03855 INP51YIL002C 2841 nt1.85□□□□□ -2.11
TY1B-DR1Q03855 ZRG17YNR039C 1818 nt1.84□□□□□ -2.11
Retrieved 100 of 7,029 protein–RNA pairs in 40.5 ms