Protein–RNA interactions for Protein: O75841

UPK1B, Uroplakin-1b, humanhuman

Predictions only

Length 260 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
UPK1BO75841 MARCH2-201ENST00000215555 1376 ntAPPRIS P1 TSL 5 BASIC18.21■□□□□ 0.51
UPK1BO75841 ANKRD40-201ENST00000285243 4184 ntAPPRIS P1 TSL 1 (best) BASIC18.21■□□□□ 0.51
UPK1BO75841 HES4-204ENST00000484667 667 ntTSL 3 BASIC18.21■□□□□ 0.51
UPK1BO75841 DUX4L4-201ENST00000566884 1269 ntBASIC18.21■□□□□ 0.51
UPK1BO75841 UBFD1-208ENST00000567264 642 ntAPPRIS ALT2 TSL 5 BASIC18.21■□□□□ 0.51
UPK1BO75841 UBE2Q2-208ENST00000569423 2969 ntTSL 2 BASIC18.21■□□□□ 0.51
UPK1BO75841 AC018755.3-202ENST00000596210 929 ntBASIC18.21■□□□□ 0.51
UPK1BO75841 SNAP47-202ENST00000366759 2362 ntAPPRIS P3 TSL 1 (best) BASIC18.21■□□□□ 0.51
UPK1BO75841 C3orf70-201ENST00000335012 5901 ntAPPRIS P1 TSL 1 (best) BASIC18.21■□□□□ 0.51
UPK1BO75841 FDXR-217ENST00000582944 1766 ntTSL 2 BASIC18.21■□□□□ 0.51
UPK1BO75841 EFS-201ENST00000216733 3118 ntAPPRIS P1 TSL 1 (best) BASIC18.21■□□□□ 0.51
UPK1BO75841 KANSL1-218ENST00000638275 5352 ntTSL 5 BASIC18.21■□□□□ 0.51
UPK1BO75841 SYN2-206ENST00000621198 2674 ntAPPRIS P1 TSL 1 (best) BASIC18.21■□□□□ 0.51
UPK1BO75841 TMEM250-201ENST00000418388 2823 ntAPPRIS P1 TSL 1 (best) BASIC18.21■□□□□ 0.51
UPK1BO75841 DLEU7-201ENST00000400393 2092 ntAPPRIS P3 TSL 1 (best) BASIC18.21■□□□□ 0.51
UPK1BO75841 CRTC1-204ENST00000601916 1834 ntTSL 5 BASIC18.21■□□□□ 0.51
UPK1BO75841 CDAN1-201ENST00000356231 4637 ntAPPRIS P1 TSL 1 (best) BASIC18.21■□□□□ 0.5
UPK1BO75841 SOCS3-201ENST00000330871 2734 ntAPPRIS P1 TSL 1 (best) BASIC18.21■□□□□ 0.5
UPK1BO75841 KSR1-205ENST00000509603 2731 ntAPPRIS ALT2 TSL 5 BASIC18.21■□□□□ 0.5
UPK1BO75841 CITED2-201ENST00000367651 2354 ntAPPRIS P1 TSL 1 (best) BASIC18.2■□□□□ 0.5
UPK1BO75841 PAX1-202ENST00000444366 1850 ntAPPRIS ALT2 TSL 2 BASIC18.2■□□□□ 0.5
UPK1BO75841 NHLH2-201ENST00000320238 2512 ntAPPRIS P1 TSL 1 (best) BASIC18.2■□□□□ 0.5
UPK1BO75841 GATA2-202ENST00000430265 2525 ntTSL 1 (best) BASIC18.2■□□□□ 0.5
UPK1BO75841 AL158211.5-201ENST00000623583 2518 ntBASIC18.2■□□□□ 0.5
UPK1BO75841 KIF26A-202ENST00000423312 5649 ntAPPRIS P2 TSL 5 BASIC18.2■□□□□ 0.5
UPK1BO75841 C14orf79-207ENST00000550614 1912 ntAPPRIS ALT2 TSL 1 (best) BASIC18.2■□□□□ 0.5
UPK1BO75841 LIPG-203ENST00000577628 2323 ntTSL 2 BASIC18.2■□□□□ 0.5
UPK1BO75841 FAM198A-202ENST00000430121 3121 ntAPPRIS P2 TSL 5 BASIC18.2■□□□□ 0.5
UPK1BO75841 ST3GAL3-201ENST00000262915 2470 ntTSL 5 BASIC18.2■□□□□ 0.5
UPK1BO75841 EVX2-201ENST00000308618 4203 ntAPPRIS P1 TSL 5 BASIC18.2■□□□□ 0.5
UPK1BO75841 AC138647.1-201ENST00000427937 648 ntAPPRIS P1 TSL 5 BASIC18.2■□□□□ 0.5
UPK1BO75841 TMEM191C-206ENST00000432134 1129 ntAPPRIS ALT2 TSL 5 BASIC18.2■□□□□ 0.5
UPK1BO75841 GUCD1-207ENST00000447813 895 ntTSL 3 BASIC18.2■□□□□ 0.5
UPK1BO75841 METRNL-202ENST00000570778 967 ntTSL 5 BASIC18.2■□□□□ 0.5
UPK1BO75841 XBP1-203ENST00000403532 1824 ntAPPRIS ALT1 TSL 3 BASIC18.2■□□□□ 0.5
UPK1BO75841 POMGNT2-201ENST00000344697 2544 ntAPPRIS P1 TSL 1 (best) BASIC18.2■□□□□ 0.5
UPK1BO75841 PKIB-204ENST00000368448 1561 ntAPPRIS P1 TSL 5 BASIC18.2■□□□□ 0.5
UPK1BO75841 CPNE7-201ENST00000268720 2657 ntTSL 1 (best) BASIC18.2■□□□□ 0.5
UPK1BO75841 DLGAP4-201ENST00000339266 5016 ntAPPRIS ALT2 TSL 5 BASIC18.2■□□□□ 0.5
UPK1BO75841 EVX1-202ENST00000496902 2955 ntAPPRIS P1 TSL 1 (best) BASIC18.2■□□□□ 0.5
UPK1BO75841 MAPK9-201ENST00000343111 4369 ntTSL 5 BASIC18.2■□□□□ 0.5
UPK1BO75841 AP1S1-201ENST00000337619 1306 ntAPPRIS P1 TSL 1 (best) BASIC18.2■□□□□ 0.5
UPK1BO75841 CPAMD8-202ENST00000388925 5355 ntTSL 5 BASIC18.2■□□□□ 0.5
UPK1BO75841 PODN-203ENST00000395871 2744 ntTSL 5 BASIC18.2■□□□□ 0.5
UPK1BO75841 LYSMD4-202ENST00000344791 2885 ntTSL 1 (best) BASIC18.2■□□□□ 0.5
UPK1BO75841 INAVA-202ENST00000413687 2197 ntAPPRIS P2 TSL 2 BASIC18.2■□□□□ 0.5
UPK1BO75841 TCF3P1-201ENST00000423021 1937 ntBASIC18.19■□□□□ 0.5
UPK1BO75841 ME3-202ENST00000393324 2240 ntAPPRIS P1 TSL 1 (best) BASIC18.19■□□□□ 0.5
UPK1BO75841 NPLOC4-201ENST00000331134 4415 ntAPPRIS P1 TSL 1 (best) BASIC18.19■□□□□ 0.5
UPK1BO75841 HSF4-225ENST00000584272 1549 ntTSL 1 (best) BASIC18.19■□□□□ 0.5
UPK1BO75841 PRSS36-202ENST00000418068 2446 ntTSL 2 BASIC18.19■□□□□ 0.5
UPK1BO75841 CD2AP-201ENST00000359314 5412 ntAPPRIS P1 TSL 1 (best) BASIC18.19■□□□□ 0.5
UPK1BO75841 ADRA1B-201ENST00000306675 2047 ntAPPRIS P1 TSL 1 (best) BASIC18.19■□□□□ 0.5
UPK1BO75841 ACSL1-205ENST00000504900 1583 ntTSL 5 BASIC18.19■□□□□ 0.5
UPK1BO75841 FCGRT-217ENST00000599988 660 ntTSL 5 BASIC18.19■□□□□ 0.5
UPK1BO75841 EDN3-204ENST00000371028 2397 ntAPPRIS P4 TSL 5 BASIC18.19■□□□□ 0.5
UPK1BO75841 KCNQ5-207ENST00000403813 6539 ntAPPRIS ALT2 TSL 5 BASIC18.19■□□□□ 0.5
UPK1BO75841 CAPZB-202ENST00000264203 2068 ntTSL 2 BASIC18.19■□□□□ 0.5
UPK1BO75841 CLIP3-206ENST00000593074 2080 ntAPPRIS P1 TSL 2 BASIC18.19■□□□□ 0.5
UPK1BO75841 SLC35C1-202ENST00000442528 1756 ntTSL 1 (best) BASIC18.19■□□□□ 0.5
UPK1BO75841 RETREG2-203ENST00000430297 4618 ntAPPRIS P1 TSL 1 (best) BASIC18.19■□□□□ 0.5
UPK1BO75841 THAP7-AS1-203ENST00000452284 2298 ntTSL 2 BASIC18.19■□□□□ 0.5
UPK1BO75841 TERF1-202ENST00000276603 1677 ntAPPRIS P4 TSL 1 (best) BASIC18.18■□□□□ 0.5
UPK1BO75841 PROB1-201ENST00000434752 5122 ntAPPRIS P1 BASIC18.18■□□□□ 0.5
UPK1BO75841 TH-203ENST00000352909 1889 ntAPPRIS P1 TSL 1 (best) BASIC18.18■□□□□ 0.5
UPK1BO75841 TH-205ENST00000381175 1898 ntTSL 1 (best) BASIC18.18■□□□□ 0.5
UPK1BO75841 BID-203ENST00000399765 1879 ntTSL 2 BASIC18.18■□□□□ 0.5
UPK1BO75841 MRM1-204ENST00000614766 1857 ntAPPRIS P1 TSL 1 (best) BASIC18.18■□□□□ 0.5
UPK1BO75841 MTSS1L-201ENST00000338779 4992 ntAPPRIS P2 TSL 1 (best) BASIC18.18■□□□□ 0.5
UPK1BO75841 RAB11FIP5-201ENST00000258098 4342 ntAPPRIS P1 TSL 1 (best) BASIC18.18■□□□□ 0.5
UPK1BO75841 MTA1-201ENST00000331320 2876 ntTSL 1 (best) BASIC18.18■□□□□ 0.5
UPK1BO75841 C2CD2-202ENST00000380486 6345 ntAPPRIS P1 TSL 1 (best) BASIC18.18■□□□□ 0.5
UPK1BO75841 TRIM15-210ENST00000619857 2217 ntTSL 5 BASIC18.18■□□□□ 0.5
UPK1BO75841 TPM1-208ENST00000404484 1568 ntTSL 1 (best) BASIC18.18■□□□□ 0.5
UPK1BO75841 ACD-214ENST00000620338 2065 ntAPPRIS ALT2 TSL 1 (best) BASIC18.18■□□□□ 0.5
UPK1BO75841 KLHL31-202ENST00000407079 1905 ntAPPRIS P1 TSL 1 (best) BASIC18.18■□□□□ 0.5
UPK1BO75841 APOE-201ENST00000252486 1208 ntAPPRIS P1 TSL 1 (best) BASIC18.18■□□□□ 0.5
UPK1BO75841 PSMG4-206ENST00000438998 838 ntAPPRIS P1 TSL 2 BASIC18.18■□□□□ 0.5
UPK1BO75841 BANF1-208ENST00000533166 1135 ntAPPRIS P1 TSL 2 BASIC18.18■□□□□ 0.5
UPK1BO75841 MRPS2-202ENST00000371785 1640 ntAPPRIS P1 TSL 3 BASIC18.18■□□□□ 0.5
UPK1BO75841 PRKCD-202ENST00000394729 2810 ntAPPRIS P1 TSL 1 (best) BASIC18.18■□□□□ 0.5
UPK1BO75841 DMPK-203ENST00000354227 1982 ntTSL 2 BASIC18.18■□□□□ 0.5
UPK1BO75841 RAB11FIP4-201ENST00000394744 1968 ntTSL 2 BASIC18.18■□□□□ 0.5
UPK1BO75841 SDHA-220ENST00000617470 1952 ntTSL 5 BASIC18.18■□□□□ 0.5
UPK1BO75841 CDK13-202ENST00000340829 5066 ntAPPRIS ALT1 TSL 1 (best) BASIC18.18■□□□□ 0.5
UPK1BO75841 AC129492.1-201ENST00000399413 1804 ntTSL 1 (best) BASIC18.18■□□□□ 0.5
UPK1BO75841 TMEM218-213ENST00000531909 1828 ntAPPRIS P1 TSL 1 (best) BASIC18.18■□□□□ 0.5
UPK1BO75841 ITPKB-203ENST00000429204 6162 ntAPPRIS P1 TSL 5 BASIC18.18■□□□□ 0.5
UPK1BO75841 CTSH-201ENST00000220166 2190 ntAPPRIS P1 TSL 1 (best) BASIC18.18■□□□□ 0.5
UPK1BO75841 AC125437.2-201ENST00000625180 2167 ntBASIC18.18■□□□□ 0.5
UPK1BO75841 TM7SF3-201ENST00000343028 2709 ntAPPRIS P1 TSL 1 (best) BASIC18.18■□□□□ 0.5
UPK1BO75841 RAB4A-205ENST00000618010 2799 ntTSL 3 BASIC18.18■□□□□ 0.5
UPK1BO75841 LINC01089-202ENST00000429892 1521 ntTSL 1 (best) BASIC18.18■□□□□ 0.5
UPK1BO75841 CASP9-203ENST00000375890 1351 ntTSL 2 BASIC18.17■□□□□ 0.5
UPK1BO75841 KRT8-216ENST00000552551 2126 ntAPPRIS P1 TSL 2 BASIC18.17■□□□□ 0.5
UPK1BO75841 IFFO1-212ENST00000619571 2724 ntTSL 2 BASIC18.17■□□□□ 0.5
UPK1BO75841 FOXP4-202ENST00000373057 3300 ntTSL 1 (best) BASIC18.17■□□□□ 0.5
UPK1BO75841 AC093503.3-201ENST00000624917 2352 ntBASIC18.17■□□□□ 0.5
UPK1BO75841 NECTIN1-201ENST00000264025 5840 ntAPPRIS P1 TSL 1 (best) BASIC18.17■□□□□ 0.5
UPK1BO75841 USP45-205ENST00000472914 1617 ntTSL 5 BASIC18.17■□□□□ 0.5
Retrieved 100 of 98,524 protein–RNA pairs in 25.9 ms