Protein–RNA interactions for Protein: Q9Y5I4

PCDHAC2, Protocadherin alpha-C2, humanhuman

Predictions only

Length 1,007 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
PCDHAC2Q9Y5I4 PAPD7-201ENST00000230859 5459 ntTSL 1 (best) BASIC25.05■■□□□ 1.6
PCDHAC2Q9Y5I4 PRR20B-201ENST00000377930 1847 ntAPPRIS P1 TSL 1 (best) BASIC25.05■■□□□ 1.6
PCDHAC2Q9Y5I4 PRR20A-201ENST00000377931 1847 ntAPPRIS P1 TSL 1 (best) BASIC25.05■■□□□ 1.6
PCDHAC2Q9Y5I4 PRR20E-201ENST00000434815 1847 ntAPPRIS P1 TSL 1 (best) BASIC25.05■■□□□ 1.6
PCDHAC2Q9Y5I4 PRR20D-201ENST00000452123 1847 ntAPPRIS P1 TSL 1 (best) BASIC25.05■■□□□ 1.6
PCDHAC2Q9Y5I4 PRR20C-201ENST00000544357 1847 ntAPPRIS P1 TSL 1 (best) BASIC25.05■■□□□ 1.6
PCDHAC2Q9Y5I4 PRR20C-202ENST00000614894 1847 ntAPPRIS P1 TSL 1 (best) BASIC25.05■■□□□ 1.6
PCDHAC2Q9Y5I4 CD151-213ENST00000528011 1369 ntAPPRIS ALT1 TSL 5 BASIC25.05■■□□□ 1.6
PCDHAC2Q9Y5I4 EEFSEC-201ENST00000254730 2232 ntAPPRIS P1 TSL 1 (best) BASIC25.04■■□□□ 1.6
PCDHAC2Q9Y5I4 GATS-205ENST00000436886 2726 ntAPPRIS P1 TSL 1 (best) BASIC25.04■■□□□ 1.6
PCDHAC2Q9Y5I4 DACT3-201ENST00000300875 2526 ntTSL 1 (best) BASIC25.04■■□□□ 1.6
PCDHAC2Q9Y5I4 CD99-203ENST00000381184 918 ntAPPRIS ALT2 TSL 5 BASIC25.04■■□□□ 1.6
PCDHAC2Q9Y5I4 SLC47A1P1-201ENST00000420951 500 ntTSL 5 BASIC25.04■■□□□ 1.6
PCDHAC2Q9Y5I4 VMO1-204ENST00000441199 741 ntTSL 2 BASIC25.04■■□□□ 1.6
PCDHAC2Q9Y5I4 ABCC3-217ENST00000515707 656 ntTSL 3 BASIC25.04■■□□□ 1.6
PCDHAC2Q9Y5I4 AC089999.2-201ENST00000552525 248 ntTSL 3 BASIC25.04■■□□□ 1.6
PCDHAC2Q9Y5I4 AC044860.1-201ENST00000560756 1160 ntTSL 1 (best) BASIC25.04■■□□□ 1.6
PCDHAC2Q9Y5I4 CA7-201ENST00000338437 1555 ntAPPRIS P1 TSL 1 (best) BASIC25.03■■□□□ 1.6
PCDHAC2Q9Y5I4 TMEM35B-201ENST00000373337 922 ntAPPRIS P1 TSL 1 (best) BASIC25.03■■□□□ 1.6
PCDHAC2Q9Y5I4 EIF3J-AS1-205ENST00000560750 1093 ntTSL 3 BASIC25.03■■□□□ 1.6
PCDHAC2Q9Y5I4 BTBD7-205ENST00000554565 2697 ntTSL 1 (best) BASIC25.03■■□□□ 1.6
PCDHAC2Q9Y5I4 ACADS-202ENST00000411593 1398 ntTSL 2 BASIC25.03■■□□□ 1.6
PCDHAC2Q9Y5I4 CLDN5-204ENST00000618236 1374 ntAPPRIS P1 BASIC25.03■■□□□ 1.6
PCDHAC2Q9Y5I4 NAA35-202ENST00000376040 1797 ntTSL 2 BASIC25.03■■□□□ 1.6
PCDHAC2Q9Y5I4 CYYR1-202ENST00000400043 735 ntTSL 1 (best) BASIC25.02■■□□□ 1.6
PCDHAC2Q9Y5I4 RPS2P4-201ENST00000476944 856 ntBASIC25.02■■□□□ 1.6
PCDHAC2Q9Y5I4 UNC93B4-201ENST00000505679 747 ntBASIC25.02■■□□□ 1.6
PCDHAC2Q9Y5I4 CAVIN3-203ENST00000530979 957 ntTSL 2 BASIC25.02■■□□□ 1.6
PCDHAC2Q9Y5I4 ANAPC11-208ENST00000572851 686 ntAPPRIS P1 TSL 1 (best) BASIC25.02■■□□□ 1.6
PCDHAC2Q9Y5I4 AP006294.2-201ENST00000641667 209 ntBASIC25.02■■□□□ 1.6
PCDHAC2Q9Y5I4 NPAS3-203ENST00000357798 2763 ntAPPRIS ALT2 TSL 1 (best) BASIC25.02■■□□□ 1.6
PCDHAC2Q9Y5I4 ASB6-201ENST00000277458 2330 ntAPPRIS P1 TSL 1 (best) BASIC25.02■■□□□ 1.6
PCDHAC2Q9Y5I4 PQLC2-203ENST00000400548 1548 ntTSL 1 (best) BASIC25.02■■□□□ 1.6
PCDHAC2Q9Y5I4 CERS5-201ENST00000317551 2051 ntAPPRIS P3 TSL 2 BASIC25.01■■□□□ 1.59
PCDHAC2Q9Y5I4 TPST2-203ENST00000403880 2084 ntAPPRIS P1 TSL 5 BASIC25.01■■□□□ 1.59
PCDHAC2Q9Y5I4 TSPAN3-202ENST00000346495 1647 ntTSL 2 BASIC25.01■■□□□ 1.59
PCDHAC2Q9Y5I4 UBE2I-205ENST00000402301 1708 ntTSL 1 (best) BASIC25.01■■□□□ 1.59
PCDHAC2Q9Y5I4 ANKRD19P-205ENST00000473204 2370 ntTSL 1 (best) BASIC25.01■■□□□ 1.59
PCDHAC2Q9Y5I4 ATAD3B-201ENST00000308647 2448 ntAPPRIS P1 TSL 1 (best) BASIC25.01■■□□□ 1.59
PCDHAC2Q9Y5I4 SPIRE1-203ENST00000410092 5533 ntAPPRIS P3 TSL 1 (best) BASIC25.01■■□□□ 1.59
PCDHAC2Q9Y5I4 HSF2BP-201ENST00000291560 1899 ntAPPRIS P1 TSL 1 (best) BASIC25.01■■□□□ 1.59
PCDHAC2Q9Y5I4 C10orf76-201ENST00000311122 724 ntTSL 1 (best) BASIC25.01■■□□□ 1.59
PCDHAC2Q9Y5I4 AL360181.5-201ENST00000368554 1044 ntAPPRIS P1 TSL 2 BASIC25.01■■□□□ 1.59
PCDHAC2Q9Y5I4 CLDN3-201ENST00000395145 1274 ntAPPRIS P1 BASIC25.01■■□□□ 1.59
PCDHAC2Q9Y5I4 RHOD-202ENST00000532559 538 ntTSL 3 BASIC25.01■■□□□ 1.59
PCDHAC2Q9Y5I4 PNMA6A-201ENST00000421798 2209 ntAPPRIS P1 TSL 2 BASIC25.01■■□□□ 1.59
PCDHAC2Q9Y5I4 MAPKAPK5-AS1-201ENST00000428207 2290 ntTSL 1 (best) BASIC25.01■■□□□ 1.59
PCDHAC2Q9Y5I4 PHOSPHO1-206ENST00000514112 1587 ntTSL 1 (best) BASIC25.01■■□□□ 1.59
PCDHAC2Q9Y5I4 GNB1L-202ENST00000403325 1699 ntAPPRIS P1 TSL 1 (best) BASIC25.01■■□□□ 1.59
PCDHAC2Q9Y5I4 NSMF-203ENST00000371472 1852 ntAPPRIS P3 TSL 2 BASIC25■■□□□ 1.59
PCDHAC2Q9Y5I4 PYCR1-216ENST00000619204 1904 ntAPPRIS P1 TSL 1 (best) BASIC25■■□□□ 1.59
PCDHAC2Q9Y5I4 RNF38-205ENST00000377877 1974 ntTSL 2 BASIC25■■□□□ 1.59
PCDHAC2Q9Y5I4 FAM99A-202ENST00000538190 1989 ntBASIC25■■□□□ 1.59
PCDHAC2Q9Y5I4 RITA1-202ENST00000549621 2041 ntAPPRIS P1 TSL 2 BASIC25■■□□□ 1.59
PCDHAC2Q9Y5I4 RASSF10-201ENST00000529419 2530 ntAPPRIS P1 BASIC25■■□□□ 1.59
PCDHAC2Q9Y5I4 C20orf196-202ENST00000378979 585 ntTSL 2 BASIC25■■□□□ 1.59
PCDHAC2Q9Y5I4 THAP6-213ENST00000514480 1161 ntAPPRIS P3 TSL 1 (best) BASIC25■■□□□ 1.59
PCDHAC2Q9Y5I4 CD55-205ENST00000367067 1843 ntAPPRIS ALT2 TSL 5 BASIC25■■□□□ 1.59
PCDHAC2Q9Y5I4 AC092384.1-201ENST00000378347 1812 ntTSL 2 BASIC25■■□□□ 1.59
PCDHAC2Q9Y5I4 HAS1-201ENST00000222115 2087 ntAPPRIS P3 TSL 1 (best) BASIC24.99■■□□□ 1.59
PCDHAC2Q9Y5I4 RTCA-201ENST00000260563 1534 ntTSL 1 (best) BASIC24.99■■□□□ 1.59
PCDHAC2Q9Y5I4 JAG2-201ENST00000331782 5835 ntAPPRIS P1 TSL 1 (best) BASIC24.99■■□□□ 1.59
PCDHAC2Q9Y5I4 SH3GLB2-202ENST00000372559 1365 ntAPPRIS P1 TSL 1 (best) BASIC24.99■■□□□ 1.59
PCDHAC2Q9Y5I4 ZPBP-203ENST00000419417 1095 ntAPPRIS ALT2 TSL 1 (best) BASIC24.99■■□□□ 1.59
PCDHAC2Q9Y5I4 AP000697.1-201ENST00000430607 339 ntTSL 5 BASIC24.99■■□□□ 1.59
PCDHAC2Q9Y5I4 AC245052.3-201ENST00000450182 901 ntBASIC24.99■■□□□ 1.59
PCDHAC2Q9Y5I4 NUF2-208ENST00000524800 1845 ntTSL 5 BASIC24.99■■□□□ 1.59
PCDHAC2Q9Y5I4 SPI1-204ENST00000533968 1290 ntTSL 1 (best) BASIC24.99■■□□□ 1.59
PCDHAC2Q9Y5I4 DHRS4-204ENST00000543741 1340 ntTSL 2 BASIC24.99■■□□□ 1.59
PCDHAC2Q9Y5I4 AC233263.1-201ENST00000578059 224 ntBASIC24.99■■□□□ 1.59
PCDHAC2Q9Y5I4 USP36-216ENST00000589424 970 ntTSL 5 BASIC24.99■■□□□ 1.59
PCDHAC2Q9Y5I4 IRX4-207ENST00000613726 2403 ntTSL 1 (best) BASIC24.99■■□□□ 1.59
PCDHAC2Q9Y5I4 PIP4K2B-204ENST00000619039 5734 ntAPPRIS P1 TSL 1 (best) BASIC24.99■■□□□ 1.59
PCDHAC2Q9Y5I4 AL359736.2-201ENST00000621992 437 ntBASIC24.99■■□□□ 1.59
PCDHAC2Q9Y5I4 MAPK14-210ENST00000622903 1003 ntTSL 5 BASIC24.99■■□□□ 1.59
PCDHAC2Q9Y5I4 CNEP1R1-202ENST00000427478 2117 ntAPPRIS P1 TSL 1 (best) BASIC24.98■■□□□ 1.59
PCDHAC2Q9Y5I4 PGAM5-204ENST00000543955 1773 ntTSL 2 BASIC24.98■■□□□ 1.59
PCDHAC2Q9Y5I4 RALGPS1-207ENST00000394022 1672 ntTSL 2 BASIC24.98■■□□□ 1.59
PCDHAC2Q9Y5I4 SMPD2-201ENST00000258052 1645 ntAPPRIS P1 TSL 1 (best) BASIC24.98■■□□□ 1.59
PCDHAC2Q9Y5I4 NFIX-205ENST00000585575 1485 ntAPPRIS P1 TSL 5 BASIC24.98■■□□□ 1.59
PCDHAC2Q9Y5I4 RNASET2-214ENST00000620173 1391 ntTSL 5 BASIC24.98■■□□□ 1.59
PCDHAC2Q9Y5I4 EEF1DP3-201ENST00000428783 1309 ntTSL 1 (best) BASIC24.98■■□□□ 1.59
PCDHAC2Q9Y5I4 BTBD2-201ENST00000255608 2649 ntAPPRIS P1 TSL 1 (best) BASIC24.98■■□□□ 1.59
PCDHAC2Q9Y5I4 SYNGR1-201ENST00000216155 497 ntTSL 3 BASIC24.98■■□□□ 1.59
PCDHAC2Q9Y5I4 WDR74-202ENST00000311713 1153 ntTSL 1 (best) BASIC24.98■■□□□ 1.59
PCDHAC2Q9Y5I4 NMRK1-201ENST00000361092 1185 ntAPPRIS P1 TSL 1 (best) BASIC24.98■■□□□ 1.59
PCDHAC2Q9Y5I4 EGFL7-202ENST00000371698 1282 ntAPPRIS P1 TSL 1 (best) BASIC24.98■■□□□ 1.59
PCDHAC2Q9Y5I4 LINC01301-204ENST00000530725 577 ntTSL 4 BASIC24.98■■□□□ 1.59
PCDHAC2Q9Y5I4 AC090527.2-201ENST00000564080 1060 ntAPPRIS P1 TSL 3 BASIC24.98■■□□□ 1.59
PCDHAC2Q9Y5I4 ARHGAP27-207ENST00000528273 2319 ntTSL 1 (best) BASIC24.98■■□□□ 1.59
PCDHAC2Q9Y5I4 SYT7-203ENST00000539008 2061 ntTSL 5 BASIC24.98■■□□□ 1.59
PCDHAC2Q9Y5I4 ANKHD1-204ENST00000394722 2035 ntTSL 1 (best) BASIC24.98■■□□□ 1.59
PCDHAC2Q9Y5I4 H2AFY2-201ENST00000373255 1980 ntAPPRIS P1 TSL 1 (best) BASIC24.98■■□□□ 1.59
PCDHAC2Q9Y5I4 POTED-202ENST00000620442 1988 ntAPPRIS ALT2 TSL 1 (best) BASIC24.98■■□□□ 1.59
PCDHAC2Q9Y5I4 CDC14A-203ENST00000370124 1883 ntTSL 1 (best) BASIC24.98■■□□□ 1.59
PCDHAC2Q9Y5I4 AC127496.7-201ENST00000625110 1798 ntBASIC24.98■■□□□ 1.59
PCDHAC2Q9Y5I4 DONSON-210ENST00000453626 2332 ntTSL 5 BASIC24.97■■□□□ 1.59
PCDHAC2Q9Y5I4 CENPS-CORT-201ENST00000400900 1469 ntTSL 2 BASIC24.97■■□□□ 1.59
PCDHAC2Q9Y5I4 DONSON-201ENST00000303071 2170 ntAPPRIS P1 TSL 1 (best) BASIC24.97■■□□□ 1.59
PCDHAC2Q9Y5I4 ASB18-201ENST00000409749 1401 ntAPPRIS P1 TSL 1 (best) BASIC24.97■■□□□ 1.59
Retrieved 100 of 98,524 protein–RNA pairs in 89.8 ms