Protein–RNA interactions for Protein: Q9NUP1

BLOC1S4, Biogenesis of lysosome-related organelles complex 1 subunit 4, humanhuman

Predictions only

Length 217 aa.

Download Table  
Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
BLOC1S4Q9NUP1 AC011825.4-201ENST00000582233 473 ntTSL 2 BASIC23.32■■□□□ 1.32
BLOC1S4Q9NUP1 NEDD4L-225ENST00000589054 1033 ntTSL 3 BASIC23.32■■□□□ 1.32
BLOC1S4Q9NUP1 FAM118B-209ENST00000533050 2402 ntAPPRIS P3 TSL 1 (best) BASIC23.32■■□□□ 1.32
BLOC1S4Q9NUP1 SMAGP-205ENST00000603864 1518 ntAPPRIS P1 TSL 2 BASIC23.32■■□□□ 1.32
BLOC1S4Q9NUP1 NAA10-208ENST00000464845 1772 ntAPPRIS P1 TSL 1 (best) BASIC23.32■■□□□ 1.32
BLOC1S4Q9NUP1 OSR2-203ENST00000457907 2126 ntTSL 2 BASIC23.32■■□□□ 1.32
BLOC1S4Q9NUP1 MIF4GD-202ENST00000325102 1306 ntAPPRIS P1 TSL 2 BASIC23.32■■□□□ 1.32
BLOC1S4Q9NUP1 PACRGL-208ENST00000503585 1582 ntAPPRIS P1 TSL 2 BASIC23.31■■□□□ 1.32
BLOC1S4Q9NUP1 PHOSPHO1-206ENST00000514112 1587 ntTSL 1 (best) BASIC23.31■■□□□ 1.32
BLOC1S4Q9NUP1 PMPCA-201ENST00000371717 2174 ntAPPRIS P1 TSL 1 (best) BASIC23.31■■□□□ 1.32
BLOC1S4Q9NUP1 FAM193B-217ENST00000514747 2913 ntAPPRIS P1 TSL 5 BASIC23.31■■□□□ 1.32
BLOC1S4Q9NUP1 HHIPL1-202ENST00000357223 2241 ntTSL 1 (best) BASIC23.31■■□□□ 1.32
BLOC1S4Q9NUP1 MANBAL-202ENST00000373606 1208 ntAPPRIS P1 TSL 1 (best) BASIC23.31■■□□□ 1.32
BLOC1S4Q9NUP1 LINC01678-201ENST00000411694 863 ntTSL 5 BASIC23.31■■□□□ 1.32
BLOC1S4Q9NUP1 LINC01816-201ENST00000414141 662 ntTSL 1 (best) BASIC23.31■■□□□ 1.32
BLOC1S4Q9NUP1 KRT18P20-201ENST00000548986 1279 ntBASIC23.31■■□□□ 1.32
BLOC1S4Q9NUP1 RARRES2P11-201ENST00000635158 484 ntBASIC23.31■■□□□ 1.32
BLOC1S4Q9NUP1 FAM69B-202ENST00000371692 1668 ntAPPRIS P1 TSL 1 (best) BASIC23.31■■□□□ 1.32
BLOC1S4Q9NUP1 TUBA1A-201ENST00000295766 1887 ntAPPRIS P1 TSL 2 BASIC23.3■■□□□ 1.32
BLOC1S4Q9NUP1 CIZ1-203ENST00000357558 2907 ntAPPRIS ALT2 TSL 5 BASIC23.3■■□□□ 1.32
BLOC1S4Q9NUP1 DR1-201ENST00000370267 1647 ntAPPRIS P1 TSL 2 BASIC23.3■■□□□ 1.32
BLOC1S4Q9NUP1 RABL2B-206ENST00000395598 2169 ntAPPRIS P3 TSL 1 (best) BASIC23.3■■□□□ 1.32
BLOC1S4Q9NUP1 MAD2L2-204ENST00000376667 872 ntAPPRIS P1 TSL 2 BASIC23.3■■□□□ 1.32
BLOC1S4Q9NUP1 SNRNP25-202ENST00000383018 1085 ntAPPRIS P2 TSL 1 (best) BASIC23.3■■□□□ 1.32
BLOC1S4Q9NUP1 ATE1-AS1-201ENST00000437593 951 ntTSL 2 BASIC23.3■■□□□ 1.32
BLOC1S4Q9NUP1 AC108002.2-201ENST00000519782 340 ntTSL 4 BASIC23.3■■□□□ 1.32
BLOC1S4Q9NUP1 KEAP1-202ENST00000393623 2648 ntAPPRIS P1 TSL 1 (best) BASIC23.3■■□□□ 1.32
BLOC1S4Q9NUP1 DBX2-201ENST00000332700 2806 ntAPPRIS P1 TSL 2 BASIC23.3■■□□□ 1.32
BLOC1S4Q9NUP1 CERS1-202ENST00000542296 1947 ntTSL 1 (best) BASIC23.29■■□□□ 1.32
BLOC1S4Q9NUP1 TNIP1-205ENST00000518977 2200 ntAPPRIS ALT2 TSL 1 (best) BASIC23.29■■□□□ 1.32
BLOC1S4Q9NUP1 DVL3-201ENST00000313143 5254 ntAPPRIS P1 TSL 1 (best) BASIC23.29■■□□□ 1.32
BLOC1S4Q9NUP1 CNIH2-201ENST00000311445 1356 ntAPPRIS P2 TSL 1 (best) BASIC23.29■■□□□ 1.32
BLOC1S4Q9NUP1 HOXA11-AS-204ENST00000522674 1549 ntTSL 1 (best) BASIC23.29■■□□□ 1.32
BLOC1S4Q9NUP1 KCNQ1-202ENST00000335475 2159 ntAPPRIS ALT2 TSL 1 (best) BASIC23.29■■□□□ 1.32
BLOC1S4Q9NUP1 MPRIP-203ENST00000395806 527 ntTSL 3 BASIC23.29■■□□□ 1.32
BLOC1S4Q9NUP1 AC012313.1-204ENST00000444227 462 ntTSL 1 (best) BASIC23.29■■□□□ 1.32
BLOC1S4Q9NUP1 AL162430.1-201ENST00000480705 870 ntBASIC23.29■■□□□ 1.32
BLOC1S4Q9NUP1 AL731577.2-201ENST00000508096 555 ntTSL 2 BASIC23.29■■□□□ 1.32
BLOC1S4Q9NUP1 AC104986.2-201ENST00000521696 380 ntTSL 2 BASIC23.29■■□□□ 1.32
BLOC1S4Q9NUP1 SEC23A-213ENST00000557280 561 ntTSL 4 BASIC23.29■■□□□ 1.32
BLOC1S4Q9NUP1 AC106820.5-201ENST00000566085 789 ntTSL 3 BASIC23.29■■□□□ 1.32
BLOC1S4Q9NUP1 C19orf84-201ENST00000570516 788 ntAPPRIS ALT2 TSL 1 (best) BASIC23.29■■□□□ 1.32
BLOC1S4Q9NUP1 F2RL3-202ENST00000599210 613 ntTSL 2 BASIC23.29■■□□□ 1.32
BLOC1S4Q9NUP1 ANKRD20A6P-201ENST00000618763 204 ntBASIC23.29■■□□□ 1.32
BLOC1S4Q9NUP1 POMGNT2-202ENST00000441964 2531 ntAPPRIS P1 TSL 4 BASIC23.29■■□□□ 1.32
BLOC1S4Q9NUP1 TRIM3-201ENST00000345851 2879 ntAPPRIS P1 TSL 1 (best) BASIC23.29■■□□□ 1.32
BLOC1S4Q9NUP1 TFAP2A-202ENST00000379608 2576 ntAPPRIS ALT1 TSL 1 (best) BASIC23.29■■□□□ 1.32
BLOC1S4Q9NUP1 MAPRE3-203ENST00000405074 1801 ntTSL 3 BASIC23.29■■□□□ 1.32
BLOC1S4Q9NUP1 DRD2-202ENST00000362072 2789 ntAPPRIS P2 TSL 1 (best) BASIC23.28■■□□□ 1.32
BLOC1S4Q9NUP1 ABLIM2-204ENST00000407564 2291 ntAPPRIS ALT2 TSL 1 (best) BASIC23.28■■□□□ 1.32
BLOC1S4Q9NUP1 LY6E-201ENST00000292494 1181 ntAPPRIS P2 TSL 1 (best) BASIC23.28■■□□□ 1.32
BLOC1S4Q9NUP1 KLRG2-202ENST00000393039 1148 ntTSL 5 BASIC23.28■■□□□ 1.32
BLOC1S4Q9NUP1 ABHD14A-204ENST00000491470 674 ntTSL 3 BASIC23.28■■□□□ 1.32
BLOC1S4Q9NUP1 TFG-210ENST00000620299 1289 ntTSL 5 BASIC23.28■■□□□ 1.32
BLOC1S4Q9NUP1 TUBG1-201ENST00000251413 1611 ntAPPRIS P1 TSL 1 (best) BASIC23.28■■□□□ 1.32
BLOC1S4Q9NUP1 ABHD12B-202ENST00000353130 1477 ntAPPRIS P3 TSL 1 (best) BASIC23.28■■□□□ 1.32
BLOC1S4Q9NUP1 HDAC11-211ENST00000433119 2043 ntTSL 1 (best) BASIC23.28■■□□□ 1.32
BLOC1S4Q9NUP1 FAM193A-211ENST00000637812 4885 ntAPPRIS ALT2 TSL 5 BASIC23.28■■□□□ 1.32
BLOC1S4Q9NUP1 HOXC9-203ENST00000508190 1505 ntAPPRIS P1 TSL 3 BASIC23.28■■□□□ 1.32
BLOC1S4Q9NUP1 ALG1-201ENST00000262374 2132 ntAPPRIS P1 TSL 1 (best) BASIC23.27■■□□□ 1.32
BLOC1S4Q9NUP1 KLF1-201ENST00000264834 1592 ntAPPRIS P1 TSL 1 (best) BASIC23.27■■□□□ 1.32
BLOC1S4Q9NUP1 COL23A1-201ENST00000390654 3061 ntAPPRIS P2 TSL 5 BASIC23.27■■□□□ 1.32
BLOC1S4Q9NUP1 MLLT10-204ENST00000377091 905 ntTSL 1 (best) BASIC23.27■■□□□ 1.32
BLOC1S4Q9NUP1 AP005205.2-201ENST00000577327 491 ntTSL 2 BASIC23.27■■□□□ 1.32
BLOC1S4Q9NUP1 RPS15-210ENST00000592623 873 ntTSL 1 (best) BASIC23.27■■□□□ 1.32
BLOC1S4Q9NUP1 UBE2DNL-204ENST00000602536 740 ntBASIC23.27■■□□□ 1.32
BLOC1S4Q9NUP1 MIR5787-201ENST00000611784 55 ntBASIC23.27■■□□□ 1.32
BLOC1S4Q9NUP1 FGF7P6-201ENST00000377614 1890 ntTSL 1 (best) BASIC23.27■■□□□ 1.32
BLOC1S4Q9NUP1 BX664615.2-202ENST00000639056 1888 ntTSL 1 (best) BASIC23.27■■□□□ 1.32
BLOC1S4Q9NUP1 IRX2-201ENST00000302057 2456 ntAPPRIS P1 TSL 1 (best) BASIC23.27■■□□□ 1.32
BLOC1S4Q9NUP1 TMEM204-202ENST00000566264 1938 ntAPPRIS P1 TSL 1 (best) BASIC23.27■■□□□ 1.32
BLOC1S4Q9NUP1 DUSP28-201ENST00000343217 1555 ntAPPRIS P1 TSL 2 BASIC23.27■■□□□ 1.32
BLOC1S4Q9NUP1 AC090360.1-201ENST00000569722 2218 ntAPPRIS ALT2 TSL 2 BASIC23.27■■□□□ 1.31
BLOC1S4Q9NUP1 TMEM259-202ENST00000356663 2748 ntAPPRIS ALT2 TSL 1 (best) BASIC23.26■■□□□ 1.31
BLOC1S4Q9NUP1 CAMK2B-207ENST00000358707 1895 ntTSL 1 (best) BASIC23.26■■□□□ 1.31
BLOC1S4Q9NUP1 EXOC3-AS1-202ENST00000623673 1663 ntBASIC23.26■■□□□ 1.31
BLOC1S4Q9NUP1 NUDT10-201ENST00000356450 1917 ntAPPRIS P1 TSL 1 (best) BASIC23.26■■□□□ 1.31
BLOC1S4Q9NUP1 RSPO1-201ENST00000356545 2621 ntAPPRIS P1 TSL 1 (best) BASIC23.26■■□□□ 1.31
BLOC1S4Q9NUP1 STX7-201ENST00000367937 1090 ntTSL 5 BASIC23.26■■□□□ 1.31
BLOC1S4Q9NUP1 MAP1LC3A-202ENST00000374837 961 ntTSL 3 BASIC23.26■■□□□ 1.31
BLOC1S4Q9NUP1 PLK5-205ENST00000642079 1969 ntBASIC23.26■■□□□ 1.31
BLOC1S4Q9NUP1 RELA-201ENST00000308639 2681 ntAPPRIS ALT1 TSL 1 (best) BASIC23.26■■□□□ 1.31
BLOC1S4Q9NUP1 GATA6-AS1-202ENST00000583490 1788 ntTSL 2 BASIC23.26■■□□□ 1.31
BLOC1S4Q9NUP1 GPAA1-202ENST00000361036 1840 ntTSL 1 (best) BASIC23.26■■□□□ 1.31
BLOC1S4Q9NUP1 GPR108-201ENST00000264080 2057 ntAPPRIS P2 TSL 1 (best) BASIC23.26■■□□□ 1.31
BLOC1S4Q9NUP1 DPF1-201ENST00000355526 1632 ntTSL 1 (best) BASIC23.26■■□□□ 1.31
BLOC1S4Q9NUP1 BOK-201ENST00000318407 2657 ntAPPRIS P1 TSL 1 (best) BASIC23.26■■□□□ 1.31
BLOC1S4Q9NUP1 CTCF-202ENST00000401394 2978 ntTSL 1 (best) BASIC23.25■■□□□ 1.31
BLOC1S4Q9NUP1 WWTR1-AS1-202ENST00000479752 1700 ntTSL 1 (best) BASIC23.25■■□□□ 1.31
BLOC1S4Q9NUP1 RELL2-207ENST00000521367 1780 ntTSL 5 BASIC23.25■■□□□ 1.31
BLOC1S4Q9NUP1 CCNYL1-202ENST00000339882 2619 ntAPPRIS P1 TSL 1 (best) BASIC23.25■■□□□ 1.31
BLOC1S4Q9NUP1 EFNA2-201ENST00000215368 949 ntAPPRIS P1 TSL 1 (best) BASIC23.25■■□□□ 1.31
BLOC1S4Q9NUP1 FAM207A-201ENST00000291634 927 ntAPPRIS P3 TSL 1 (best) BASIC23.25■■□□□ 1.31
BLOC1S4Q9NUP1 NFKBIB-201ENST00000313582 1159 ntAPPRIS P1 TSL 1 (best) BASIC23.25■■□□□ 1.31
BLOC1S4Q9NUP1 IL15RA-201ENST00000379971 588 ntTSL 3 BASIC23.25■■□□□ 1.31
BLOC1S4Q9NUP1 MIR935-201ENST00000401179 91 ntBASIC23.25■■□□□ 1.31
BLOC1S4Q9NUP1 UMAD1-202ENST00000463725 559 ntTSL 4 BASIC23.25■■□□□ 1.31
BLOC1S4Q9NUP1 AC021660.2-201ENST00000502999 388 ntTSL 3 BASIC23.25■■□□□ 1.31
BLOC1S4Q9NUP1 AC092368.3-201ENST00000562549 1107 ntTSL 5 BASIC23.25■■□□□ 1.31
BLOC1S4Q9NUP1 AC140479.5-201ENST00000568189 735 ntTSL 3 BASIC23.25■■□□□ 1.31
Retrieved 100 of 98,524 protein–RNA pairs in 21.6 ms