Protein–RNA interactions for Protein: P40318

SSM4, ERAD-associated E3 ubiquitin-protein ligase DOA10, yeastyeast

Predictions only

Length 1,319 aa.

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Protein RNA Prediction (catRAPID) Interaction (RIP-Chip)
Gene UniProt Accession Gene Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score Detected Interaction
SSM4P40318 ARF1YDL192W 546 nt3.77□□□□□ -1.81
SSM4P40318 YEL075CYEL075C 369 nt3.77□□□□□ -1.81
SSM4P40318 STE2YFL026W 1296 nt3.77□□□□□ -1.81
SSM4P40318 BRR6YGL247W 594 nt3.77□□□□□ -1.81
SSM4P40318 IME1YJR094C 1083 nt3.77□□□□□ -1.81
SSM4P40318 AAR2YBL074C 1068 nt3.77□□□□□ -1.81
SSM4P40318 IZH2YOL002C 954 nt3.77□□□□□ -1.81
SSM4P40318 SME1YOR159C 285 nt3.77□□□□□ -1.81
SSM4P40318 snR43snR43 209 nt3.77□□□□□ -1.81
SSM4P40318 VPS38YLR360W 1320 nt3.77□□□□□ -1.81
SSM4P40318 SEC26YDR238C 2922 nt3.77□□□□□ -1.81
SSM4P40318 PEX6YNL329C 3093 nt3.77□□□□□ -1.81
SSM4P40318 CLB3YDL155W 1284 nt3.76□□□□□ -1.81
SSM4P40318 YPD1YDL235C 504 nt3.76□□□□□ -1.81
SSM4P40318 RPL14BYHL001W 417 nt3.76□□□□□ -1.81
SSM4P40318 YIL174WYIL174W 228 nt3.76□□□□□ -1.81
SSM4P40318 YJL222W-AYJL222W-A 228 nt3.76□□□□□ -1.81
SSM4P40318 YLR416CYLR416C 399 nt3.76□□□□□ -1.81
SSM4P40318 YOL107WYOL107W 1029 nt3.76□□□□□ -1.81
SSM4P40318 YBR287WYBR287W 1284 nt3.76□□□□□ -1.81
SSM4P40318 YSP2YDR326C 4317 nt3.76□□□□□ -1.81
SSM4P40318 CCM1YGR150C 2595 nt3.75□□□□□ -1.81
SSM4P40318 snR68snR68 136 nt3.75□□□□□ -1.81
SSM4P40318 YGR121W-AYGR121W-A 216 nt3.75□□□□□ -1.81
SSM4P40318 PDX1YGR193C 1233 nt3.75□□□□□ -1.81
SSM4P40318 YLR050CYLR050C 486 nt3.75□□□□□ -1.81
SSM4P40318 HHF1YBR009C 312 nt3.75□□□□□ -1.81
SSM4P40318 YBR201C-AYBR201C-A 204 nt3.75□□□□□ -1.81
SSM4P40318 CPA2YJR109C 3357 nt3.75□□□□□ -1.81
SSM4P40318 YJL049WYJL049W 1353 nt3.75□□□□□ -1.81
SSM4P40318 GPM2YDL021W 936 nt3.74□□□□□ -1.81
SSM4P40318 AI3Q0060 1248 nt3.74□□□□□ -1.81
SSM4P40318 DLS1YJL065C 504 nt3.74□□□□□ -1.81
SSM4P40318 LSM1YJL124C 519 nt3.74□□□□□ -1.81
SSM4P40318 RPA12YJR063W 378 nt3.74□□□□□ -1.81
SSM4P40318 SAS5YOR213C 747 nt3.74□□□□□ -1.81
SSM4P40318 MGE1YOR232W 687 nt3.74□□□□□ -1.81
SSM4P40318 DGA1YOR245C 1257 nt3.74□□□□□ -1.81
SSM4P40318 ARL1YBR164C 552 nt3.74□□□□□ -1.81
SSM4P40318 DPB3YBR278W 606 nt3.74□□□□□ -1.81
SSM4P40318 BCK1YJL095W 4437 nt3.74□□□□□ -1.81
SSM4P40318 HRD1YOL013C 1656 nt3.74□□□□□ -1.81
SSM4P40318 YLR177WYLR177W 1887 nt3.74□□□□□ -1.81
SSM4P40318 PSP1YDR505C 2526 nt3.74□□□□□ -1.81
SSM4P40318 HAA1YPR008W 2085 nt3.74□□□□□ -1.81
SSM4P40318 MRPL9YGR220C 810 nt3.73□□□□□ -1.81
SSM4P40318 YHL002C-AYHL002C-A 489 nt3.73□□□□□ -1.81
SSM4P40318 YHL048C-AYHL048C-A 135 nt3.73□□□□□ -1.81
SSM4P40318 SUB1YMR039C 879 nt3.73□□□□□ -1.81
SSM4P40318 SRL1YOR247W 633 nt3.73□□□□□ -1.81
SSM4P40318 YPL088WYPL088W 1029 nt3.73□□□□□ -1.81
SSM4P40318 YBR090CYBR090C 369 nt3.73□□□□□ -1.81
SSM4P40318 CBP6YBR120C 489 nt3.73□□□□□ -1.81
SSM4P40318 APD1YBR151W 951 nt3.73□□□□□ -1.81
SSM4P40318 TRM82YDR165W 1335 nt3.73□□□□□ -1.81
SSM4P40318 ATP25YMR098C 1839 nt3.73□□□□□ -1.81
SSM4P40318 NGG1YDR176W 2109 nt3.73□□□□□ -1.81
SSM4P40318 FLO9YAL063C 3969 nt3.73□□□□□ -1.81
SSM4P40318 YBP2YGL060W 1926 nt3.73□□□□□ -1.81
SSM4P40318 RAD5YLR032W 3510 nt3.73□□□□□ -1.81
SSM4P40318 ENA5YDR038C 3276 nt3.73□□□□□ -1.81
SSM4P40318 ESL1YIL151C 3357 nt3.73□□□□□ -1.81
SSM4P40318 NRG1YDR043C 696 nt3.72□□□□□ -1.81
SSM4P40318 SMT3YDR510W 306 nt3.72□□□□□ -1.81
SSM4P40318 YEL050W-AYEL050W-A 192 nt3.72□□□□□ -1.81
SSM4P40318 LIP2YLR239C 987 nt3.72□□□□□ -1.81
SSM4P40318 FAR3YMR052W 615 nt3.72□□□□□ -1.81
SSM4P40318 TUM1YOR251C 915 nt3.72□□□□□ -1.81
SSM4P40318 PFF1YBR074W 2931 nt3.72□□□□□ -1.81
SSM4P40318 YEA4YEL004W 1029 nt3.71□□□□□ -1.81
SSM4P40318 GEP4YHR100C 558 nt3.71□□□□□ -1.81
SSM4P40318 YHR213WYHR213W 597 nt3.71□□□□□ -1.81
SSM4P40318 YJL114WYJL114W 681 nt3.71□□□□□ -1.81
SSM4P40318 YAR062WYAR062W 597 nt3.71□□□□□ -1.81
SSM4P40318 YLR400WYLR400W 474 nt3.71□□□□□ -1.81
SSM4P40318 VAM10YOR068C 345 nt3.71□□□□□ -1.81
SSM4P40318 SPR2YOR214C 711 nt3.71□□□□□ -1.81
SSM4P40318 snR189snR189 189 nt3.71□□□□□ -1.81
SSM4P40318 TAO3YIL129C 7131 nt3.71□□□□□ -1.81
SSM4P40318 CDC20YGL116W 1833 nt3.71□□□□□ -1.82
SSM4P40318 INP52YNL106C 3552 nt3.71□□□□□ -1.82
SSM4P40318 MYO3YKL129C 3819 nt3.71□□□□□ -1.82
SSM4P40318 IRC3YDR332W 2070 nt3.71□□□□□ -1.82
SSM4P40318 SRP1YNL189W 1629 nt3.71□□□□□ -1.82
SSM4P40318 VAB2YEL005C 849 nt3.7□□□□□ -1.82
SSM4P40318 YJL032WYJL032W 315 nt3.7□□□□□ -1.82
SSM4P40318 TSR4YOL022C 1227 nt3.7□□□□□ -1.82
SSM4P40318 SPO14YKR031C 5052 nt3.7□□□□□ -1.82
SSM4P40318 URK1YNR012W 1506 nt3.7□□□□□ -1.82
SSM4P40318 BYE1YKL005C 1785 nt3.7□□□□□ -1.82
SSM4P40318 STU1YBL034C 4542 nt3.7□□□□□ -1.82
SSM4P40318 YPR1YDR368W 939 nt3.7□□□□□ -1.82
SSM4P40318 EST3YIL009C-A 546 nt3.7□□□□□ -1.82
SSM4P40318 YKL156C-AYKL156C-A 117 nt3.7□□□□□ -1.82
SSM4P40318 YLR217WYLR217W 324 nt3.7□□□□□ -1.82
SSM4P40318 RPL6BYLR448W 531 nt3.7□□□□□ -1.82
SSM4P40318 PEX11YOL147C 711 nt3.7□□□□□ -1.82
SSM4P40318 PEX27YOR193W 1131 nt3.7□□□□□ -1.82
SSM4P40318 snR24snR24 89 nt3.7□□□□□ -1.82
SSM4P40318 ERG9YHR190W 1335 nt3.69□□□□□ -1.82
Retrieved 100 of 7,029 protein–RNA pairs in 40.2 ms