RNA–Protein interactions for RNA: YJR063W

RPA12, Transcript of RNA polymerase I subunit A12.2, yeastyeast

Gene RPA12, Length 378 nt, Biotype protein coding.

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RNA Protein Prediction (catRAPID) Interaction (RIP-Chip)
Gene Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score Detected Interaction
RPA12YJR063W DRS1P32892 752 aaKnown RBP9.28□□□□□ -0.92
RPA12YJR063W MTC1P47018 478 aaKnown RBP8.94□□□□□ -0.98
RPA12YJR063W BFR2Q06631 534 aaKnown RBP8.2□□□□□ -1.1
RPA12YJR063W TFA1P36100 482 aa7.93□□□□□ -1.14
RPA12YJR063W DIP2Q12220 943 aaPredicted RBP7.75□□□□□ -1.17
RPA12YJR063W AVT3P36062 692 aa7.72□□□□□ -1.17
RPA12YJR063W FAP1P53971 965 aa7.68□□□□□ -1.18
RPA12YJR063W ISW2Q08773 1120 aa7.32□□□□□ -1.24
RPA12YJR063W PRI1P10363 409 aa7.26□□□□□ -1.25
RPA12YJR063W PRY3P47033 881 aa7.24□□□□□ -1.25
RPA12YJR063W RSE1Q04693 1361 aaKnown RBP7.19□□□□□ -1.26
RPA12YJR063W RPG1P38249 964 aaKnown RBP7.18□□□□□ -1.26
RPA12YJR063W AAD16Q02895 342 aa7.16□□□□□ -1.26
RPA12YJR063W RQC2Q12532 1038 aaKnown RBP7.09□□□□□ -1.27
RPA12YJR063W RPL17AP05740 184 aaKnown RBP6.93□□□□□ -1.3
RPA12YJR063W RPL17BP46990 184 aaKnown RBP6.93□□□□□ -1.3
RPA12YJR063W YCK3P39962 524 aa6.89□□□□□ -1.31
RPA12YJR063W TSR3Q12094 313 aaKnown RBP6.83□□□□□ -1.32
RPA12YJR063W HAA1Q12753 694 aaKnown RBP6.83□□□□□ -1.32
RPA12YJR063W REB1P21538 810 aa6.81□□□□□ -1.32
RPA12YJR063W DMA1P38823 416 aa6.77□□□□□ -1.33
RPA12YJR063W PTP3P40048 928 aa6.77□□□□□ -1.33
RPA12YJR063W SPT21P35209 758 aa6.66□□□□□ -1.34
RPA12YJR063W RIM101P33400 625 aa6.64□□□□□ -1.35
RPA12YJR063W MRPL32P25348 183 aa6.62□□□□□ -1.35
RPA12YJR063W SSP1P38871 571 aa6.54□□□□□ -1.36
RPA12YJR063W YAH1Q12184 172 aaKnown RBP6.51□□□□□ -1.37
RPA12YJR063W OXP1P28273 1286 aa6.49□□□□□ -1.37
RPA12YJR063W YKR023WP36119 530 aaKnown RBP6.46□□□□□ -1.38
RPA12YJR063W YIL055CP40523 627 aaKnown RBP6.39□□□□□ -1.39
RPA12YJR063W YLR271WQ06152 274 aa6.37□□□□□ -1.39
RPA12YJR063W ARP8Q12386 881 aaKnown RBP RIP-Chip data6.37□□□□□ -1.39not detected
RPA12YJR063W TAF7Q05021 590 aa6.36□□□□□ -1.39
RPA12YJR063W TFC8Q12308 588 aa6.34□□□□□ -1.39
RPA12YJR063W CDC27P38042 758 aa6.33□□□□□ -1.4
RPA12YJR063W HOP09932 586 aa6.3□□□□□ -1.4
RPA12YJR063W DCD1P06773 312 aa6.27□□□□□ -1.41
RPA12YJR063W RSM7P47150 247 aa6.27□□□□□ -1.41
RPA12YJR063W LEO1P38439 464 aa6.25□□□□□ -1.41
RPA12YJR063W YGL015CP33199 130 aa6.24□□□□□ -1.41
RPA12YJR063W MGA2P40578 1113 aa6.24□□□□□ -1.41
RPA12YJR063W CST9Q06032 482 aa6.23□□□□□ -1.41
RPA12YJR063W UBP10P53874 792 aaPredicted RBP6.18□□□□□ -1.42
RPA12YJR063W SAS10Q12136 610 aaPredicted RBP6.16□□□□□ -1.42
RPA12YJR063W AI2P03876 854 aa6.15□□□□□ -1.42
RPA12YJR063W BCH2P36122 765 aa6.14□□□□□ -1.43
RPA12YJR063W PSD2P53037 1138 aaKnown RBP6.13□□□□□ -1.43
RPA12YJR063W LEU3P08638 886 aa6.1□□□□□ -1.43
RPA12YJR063W MAP2P38174 421 aaKnown RBP6.09□□□□□ -1.43
RPA12YJR063W BBC1P47068 1157 aa6.05□□□□□ -1.44
RPA12YJR063W SCY1P53009 804 aa6.04□□□□□ -1.44
RPA12YJR063W RAM2P29703 316 aa6.03□□□□□ -1.44
RPA12YJR063W EPS1P40557 701 aa6.02□□□□□ -1.45
RPA12YJR063W MRM1P25270 412 aa6.01□□□□□ -1.45
RPA12YJR063W BDF1P35817 686 aa5.99□□□□□ -1.45
RPA12YJR063W RCR1P38212 213 aa5.99□□□□□ -1.45
RPA12YJR063W BUD31P25337 157 aaPredicted RBP5.98□□□□□ -1.45
RPA12YJR063W SLX5P32828 619 aaKnown RBP5.98□□□□□ -1.45
RPA12YJR063W SET1P38827 1080 aaKnown RBP5.98□□□□□ -1.45
RPA12YJR063W SPB4P25808 606 aaPredicted RBP5.95□□□□□ -1.46
RPA12YJR063W VPS70P47161 811 aa5.95□□□□□ -1.46
RPA12YJR063W DMA2P53924 522 aa5.93□□□□□ -1.46
RPA12YJR063W RPN1P38764 993 aaKnown RBP5.92□□□□□ -1.46
RPA12YJR063W TIF4632P39936 914 aaKnown RBP5.92□□□□□ -1.46
RPA12YJR063W RTG3P38165 486 aa5.9□□□□□ -1.46
RPA12YJR063W TGL3P40308 642 aa5.9□□□□□ -1.46
RPA12YJR063W YPR148CQ06523 435 aa5.88□□□□□ -1.47
RPA12YJR063W MAK11P20484 414 aaKnown RBP5.85□□□□□ -1.47
RPA12YJR063W CKB1P43639 278 aa5.85□□□□□ -1.47
RPA12YJR063W NSR1P27476 414 aaKnown RBP RIP-Chip data5.83□□□□□ -1.48not detected
RPA12YJR063W VPS29P38759 282 aa5.81□□□□□ -1.48
RPA12YJR063W IFH1P39520 1085 aa5.81□□□□□ -1.48
RPA12YJR063W PBS2P08018 668 aa5.79□□□□□ -1.48
RPA12YJR063W COQ8P27697 501 aa5.79□□□□□ -1.48
RPA12YJR063W ABP1P15891 592 aaKnown RBP5.76□□□□□ -1.49
RPA12YJR063W MIF2P35201 549 aa5.76□□□□□ -1.49
RPA12YJR063W DSF2P38213 736 aa5.76□□□□□ -1.49
RPA12YJR063W YFR006WP43590 535 aa5.75□□□□□ -1.49
RPA12YJR063W MST1P07236 462 aa5.73□□□□□ -1.49
RPA12YJR063W EDS1P38073 919 aa5.73□□□□□ -1.49
RPA12YJR063W STS1P38637 319 aa5.73□□□□□ -1.49
RPA12YJR063W YAP5P40574 245 aa5.73□□□□□ -1.49
RPA12YJR063W KIN1P13185 1064 aa5.72□□□□□ -1.49
RPA12YJR063W GLC3P32775 704 aa5.72□□□□□ -1.49
RPA12YJR063W YMR1P47147 688 aaKnown RBP RIP-Chip data5.72□□□□□ -1.49not detected
RPA12YJR063W IES2P40154 320 aa5.71□□□□□ -1.5
RPA12YJR063W DBP1P24784 617 aaKnown RBP5.7□□□□□ -1.5
RPA12YJR063W YNR021WP53723 404 aaKnown RBP5.7□□□□□ -1.5
RPA12YJR063W YOR238WQ08634 303 aa5.7□□□□□ -1.5
RPA12YJR063W MAM3Q12296 706 aa5.7□□□□□ -1.5
RPA12YJR063W DIT2P21595 489 aa5.68□□□□□ -1.5
RPA12YJR063W REF2P42073 533 aaPredicted RBP5.68□□□□□ -1.5
RPA12YJR063W PIB1Q06651 286 aa5.67□□□□□ -1.5
RPA12YJR063W RLF2Q12495 606 aa5.67□□□□□ -1.5
RPA12YJR063W NUP42P49686 430 aaKnown RBP5.65□□□□□ -1.5
RPA12YJR063W PTC3P34221 468 aaKnown RBP5.64□□□□□ -1.51
RPA12YJR063W NOP53Q12080 455 aaKnown RBP5.64□□□□□ -1.51
RPA12YJR063W GUA1P38625 525 aaKnown RBP5.61□□□□□ -1.51
RPA12YJR063W VHR2P40041 505 aa5.6□□□□□ -1.51
RPA12YJR063W AIM7Q12156 149 aa5.6□□□□□ -1.51
Retrieved 100 of 5,963 RNA–protein pairs in 12.4 ms